Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_FL5_P23
         (965 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    35   0.11 
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365...    30   2.4  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   7.3  
10_08_0630 - 19410852-19411235,19411370-19412257,19412440-194129...    28   9.7  

>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 34.7 bits (76), Expect = 0.11
 Identities = 25/118 (21%), Positives = 29/118 (24%)
 Frame = +3

Query: 603 SASPCXXXXRPXXXXXXXPTPSXXPPLPXXXXXXXXTPFQXXXXPXTXRFTXPHXXXLPX 782
           S+ P      P       P+P   PP P         P      P       P     P 
Sbjct: 582 SSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPP 641

Query: 783 PPSXETXTXXPPXTXQXXXXXXXXSPPQPPXXAAXXAGAPXXXXXXXXXXPTPQXXPP 956
           PPS       PP             PP PP  ++                P P   PP
Sbjct: 642 PPSLPNRLVPPPPAPGIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPP 699


>05_01_0004 -
           34967-35149,35340-35501,36078-36225,36309-36385,
           36507-36577,36850-37263,37518-38268
          Length = 601

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 18/68 (26%), Positives = 20/68 (29%)
 Frame = +3

Query: 753 TXPHXXXLPXPPSXETXTXXPPXTXQXXXXXXXXSPPQPPXXAAXXAGAPXXXXXXXXXX 932
           T P     P P +       PP            SPP+PP  AA     P          
Sbjct: 57  TSPPPASPPLPSATPPLAASPPPPPPPPPPRNSPSPPKPPSQAAQSPLPPTTTTTTPPTA 116

Query: 933 PTPQXXPP 956
           P P   PP
Sbjct: 117 PVPAAAPP 124


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 17/61 (27%), Positives = 21/61 (34%)
 Frame = +3

Query: 774 LPXPPSXETXTXXPPXTXQXXXXXXXXSPPQPPXXAAXXAGAPXXXXXXXXXXPTPQXXP 953
           LP PP  E+ +   P +           PP PP   A  A  P          P P+  P
Sbjct: 288 LPLPPGRESPSR--PQSIAAAAVASPAPPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPP 345

Query: 954 P 956
           P
Sbjct: 346 P 346


>10_08_0630 -
           19410852-19411235,19411370-19412257,19412440-19412941,
           19413662-19414135,19414982-19415040,19415468-19415629
          Length = 822

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 18/63 (28%), Positives = 20/63 (31%), Gaps = 1/63 (1%)
 Frame = +3

Query: 759 PHXXXLPXP-PSXETXTXXPPXTXQXXXXXXXXSPPQPPXXAAXXAGAPXXXXXXXXXXP 935
           P    +P P PS +     PP             PP PP  AA  A  P           
Sbjct: 415 PAITVMPPPAPSQQPQPPPPPSHPTPITSVAPAPPPPPPAAAAAAASQPSPQATKSPLPA 474

Query: 936 TPQ 944
           TPQ
Sbjct: 475 TPQ 477


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,253,854
Number of Sequences: 37544
Number of extensions: 175522
Number of successful extensions: 832
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 760
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2799822860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)