Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_FL5_P23
         (965 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-852|AAF47904.2|  242|Drosophila melanogaster CG11345-PA...    31   3.1  
AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-P...    30   4.1  
AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p pro...    29   7.2  
AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA...    29   7.2  

>AE014296-852|AAF47904.2|  242|Drosophila melanogaster CG11345-PA
           protein.
          Length = 242

 Score = 30.7 bits (66), Expect = 3.1
 Identities = 19/93 (20%), Positives = 24/93 (25%)
 Frame = +3

Query: 591 PXXXSASPCXXXXRPXXXXXXXPTPSXXPPLPXXXXXXXXTPFQXXXXPXTXRFTXPHXX 770
           P   +  P      P       P P+  PP P         P      P   +   P   
Sbjct: 84  PVVRTPKPAYLPPPPPVIKVNPPKPAYLPPPPPVVKVNPPKPAYLPPPPPVVKVNPPKPS 143

Query: 771 XLPXPPSXETXTXXPPXTXQXXXXXXXXSPPQP 869
            LP PP         P            +PP+P
Sbjct: 144 YLPPPPPVVKVNPPKPAYVPPPPPAVKVNPPKP 176



 Score = 29.5 bits (63), Expect = 7.2
 Identities = 17/80 (21%), Positives = 22/80 (27%)
 Frame = +3

Query: 630 RPXXXXXXXPTPSXXPPLPXXXXXXXXTPFQXXXXPXTXRFTXPHXXXLPXPPSXETXTX 809
           +P       P P+  PP P         P      P   +   P    LP PP       
Sbjct: 80  KPEIPVVRTPKPAYLPPPPPVIKVNPPKPAYLPPPPPVVKVNPPKPAYLPPPPPVVKVNP 139

Query: 810 XPPXTXQXXXXXXXXSPPQP 869
             P            +PP+P
Sbjct: 140 PKPSYLPPPPPVVKVNPPKP 159


>AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-PA
           protein.
          Length = 926

 Score = 30.3 bits (65), Expect = 4.1
 Identities = 23/96 (23%), Positives = 25/96 (26%)
 Frame = +1

Query: 655 PPXPXPXXLSHXXXXXAXXXPFXRXSPXXRXXLXPXTLRXSXPPPPXRLPXLXLLXRXXP 834
           PP P     +          P     P     L P T R   PPPP R P         P
Sbjct: 274 PPSPRTPPPTRPPTRPPTTRPPATYLPPTNKPLPPVTTRLPPPPPPPRTPPPTRPPTKPP 333

Query: 835 XXXXXXXHXHSRXXXXPRSQAXXXXXAPPXXXPPPP 942
                  +        P          PP   PPPP
Sbjct: 334 TTRPPATYLPPTNKPPP--PVTTRRPTPPPTRPPPP 367


>AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p
           protein.
          Length = 420

 Score = 29.5 bits (63), Expect = 7.2
 Identities = 24/103 (23%), Positives = 28/103 (27%), Gaps = 3/103 (2%)
 Frame = +3

Query: 657 PTPSXXPPLPXXXXXXXXTPFQXXXXPXTXRFTXPHXXXLPXPPSXETXTXXPPXTXQXX 836
           P P   PP P         P      P       P     P PP+       P    +  
Sbjct: 295 PVPEYGPPPPAPPAGPTYQP-----RPPAPPAPAPGPTYQPRPPAPPAPAPGPTYQPRPP 349

Query: 837 XXXXXXSP---PQPPXXAAXXAGAPXXXXXXXXXXPTPQXXPP 956
                 +P   PQPP   A   G            PTP+  PP
Sbjct: 350 SPPAPPAPTYQPQPPAPPAPAPGPTYQPRPPAPPAPTPEYGPP 392



 Score = 29.1 bits (62), Expect = 9.6
 Identities = 24/102 (23%), Positives = 27/102 (26%), Gaps = 1/102 (0%)
 Frame = +3

Query: 657 PTPSXXPPLPXXXXXXXXTPFQXXXXPXTXRFTXPHXXXLPXPPSXETXTXXPPXTXQXX 836
           P PS  PP P        +P      P    +  P        PS       PP   Q  
Sbjct: 163 PAPSYGPPQPQPPAPQPPSPPSPQPGP---EYLPPDQPKPRPTPSRPQPPPPPPPRPQPT 219

Query: 837 XXXXXXSPPQPPXXAAXXA-GAPXXXXXXXXXXPTPQXXPPK 959
                  PP PP        G P          P PQ   P+
Sbjct: 220 PGYGPPPPPPPPKPQPTPGYGPPTPPPGPGPAQPAPQPPRPQ 261


>AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA
           protein.
          Length = 420

 Score = 29.5 bits (63), Expect = 7.2
 Identities = 24/103 (23%), Positives = 28/103 (27%), Gaps = 3/103 (2%)
 Frame = +3

Query: 657 PTPSXXPPLPXXXXXXXXTPFQXXXXPXTXRFTXPHXXXLPXPPSXETXTXXPPXTXQXX 836
           P P   PP P         P      P       P     P PP+       P    +  
Sbjct: 295 PVPEYGPPPPAPPAGPTYQP-----RPPAPPAPAPGPTYQPRPPAPPAPAPGPTYQPRPP 349

Query: 837 XXXXXXSP---PQPPXXAAXXAGAPXXXXXXXXXXPTPQXXPP 956
                 +P   PQPP   A   G            PTP+  PP
Sbjct: 350 SPPAPPAPTYQPQPPAPPAPAPGPTYQPRPPAPPAPTPEYGPP 392



 Score = 29.1 bits (62), Expect = 9.6
 Identities = 24/102 (23%), Positives = 27/102 (26%), Gaps = 1/102 (0%)
 Frame = +3

Query: 657 PTPSXXPPLPXXXXXXXXTPFQXXXXPXTXRFTXPHXXXLPXPPSXETXTXXPPXTXQXX 836
           P PS  PP P        +P      P    +  P        PS       PP   Q  
Sbjct: 163 PAPSYGPPQPQPPAPQPPSPPSPQPGP---EYLPPDQPKPRPTPSRPQPPPPPPPRPQPT 219

Query: 837 XXXXXXSPPQPPXXAAXXA-GAPXXXXXXXXXXPTPQXXPPK 959
                  PP PP        G P          P PQ   P+
Sbjct: 220 PGYGPPPPPPPPKPQPTPGYGPPTPPPGPGPAQPAPQPPRPQ 261


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,895,448
Number of Sequences: 53049
Number of extensions: 237756
Number of successful extensions: 753
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 683
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4833091908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)