Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_FL5_P21
(853 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 390 e-109
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 390 e-109
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 390 e-109
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 390 e-109
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 253 1e-67
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 253 1e-67
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 189 3e-48
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 189 3e-48
AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical ... 32 0.45
AF016449-13|AAG24003.1| 350|Caenorhabditis elegans Serpentine r... 31 1.0
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 30 2.4
AY090486-1|AAM11895.1| 551|Caenorhabditis elegans high-affinity... 29 3.2
Z81562-3|CAB04557.1| 352|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z14092-1|CAA78468.2| 551|Caenorhabditis elegans Hypothetical pr... 28 9.7
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 390 bits (959), Expect = e-109
Identities = 177/259 (68%), Positives = 209/259 (80%), Gaps = 1/259 (0%)
Frame = +1
Query: 37 QKISAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRP 216
+K SAPRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+P
Sbjct: 4 RKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKP 63
Query: 217 GSKINKKEIVEAVTIIETPPMVFVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWY 396
GSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 64 GSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWA 123
Query: 397 XXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEI 576
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EI
Sbjct: 124 KSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEI 183
Query: 577 QLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTKGKXYKGVTFSLAHKEXTP* 756
Q+NGGTIE KV WAREHLEK + VD+VFAQDEMID IGVT+G +KGVT S H + P
Sbjct: 184 QVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVT-SRWHTKKLPR 242
Query: 757 K-HKGLRKVACIGPWHPSR 810
K HKGLRKVACIG WHPSR
Sbjct: 243 KTHKGLRKVACIGAWHPSR 261
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 390 bits (959), Expect = e-109
Identities = 177/259 (68%), Positives = 209/259 (80%), Gaps = 1/259 (0%)
Frame = +1
Query: 37 QKISAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRP 216
+K SAPRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+P
Sbjct: 4 RKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKP 63
Query: 217 GSKINKKEIVEAVTIIETPPMVFVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWY 396
GSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 64 GSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWA 123
Query: 397 XXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEI 576
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EI
Sbjct: 124 KSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEI 183
Query: 577 QLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTKGKXYKGVTFSLAHKEXTP* 756
Q+NGGTIE KV WAREHLEK + VD+VFAQDEMID IGVT+G +KGVT S H + P
Sbjct: 184 QVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVT-SRWHTKKLPR 242
Query: 757 K-HKGLRKVACIGPWHPSR 810
K HKGLRKVACIG WHPSR
Sbjct: 243 KTHKGLRKVACIGAWHPSR 261
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 390 bits (959), Expect = e-109
Identities = 177/259 (68%), Positives = 209/259 (80%), Gaps = 1/259 (0%)
Frame = +1
Query: 37 QKISAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRP 216
+K SAPRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+P
Sbjct: 4 RKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKP 63
Query: 217 GSKINKKEIVEAVTIIETPPMVFVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWY 396
GSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 64 GSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWA 123
Query: 397 XXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEI 576
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EI
Sbjct: 124 KSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEI 183
Query: 577 QLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTKGKXYKGVTFSLAHKEXTP* 756
Q+NGGTIE KV WAREHLEK + VD+VFAQDEMID IGVT+G +KGVT S H + P
Sbjct: 184 QVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVT-SRWHTKKLPR 242
Query: 757 K-HKGLRKVACIGPWHPSR 810
K HKGLRKVACIG WHPSR
Sbjct: 243 KTHKGLRKVACIGAWHPSR 261
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 390 bits (959), Expect = e-109
Identities = 177/259 (68%), Positives = 209/259 (80%), Gaps = 1/259 (0%)
Frame = +1
Query: 37 QKISAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRP 216
+K SAPRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+P
Sbjct: 4 RKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKP 63
Query: 217 GSKINKKEIVEAVTIIETPPMVFVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWY 396
GSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 64 GSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWA 123
Query: 397 XXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEI 576
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EI
Sbjct: 124 KSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEI 183
Query: 577 QLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTKGKXYKGVTFSLAHKEXTP* 756
Q+NGGTIE KV WAREHLEK + VD+VFAQDEMID IGVT+G +KGVT S H + P
Sbjct: 184 QVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVT-SRWHTKKLPR 242
Query: 757 K-HKGLRKVACIGPWHPSR 810
K HKGLRKVACIG WHPSR
Sbjct: 243 KTHKGLRKVACIGAWHPSR 261
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 253 bits (619), Expect = 1e-67
Identities = 110/165 (66%), Positives = 131/165 (79%)
Frame = +1
Query: 37 QKISAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRP 216
+K SAPRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+P
Sbjct: 4 RKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKP 63
Query: 217 GSKINKKEIVEAVTIIETPPMVFVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWY 396
GSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 64 GSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWA 123
Query: 397 XXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQM 531
WQDE G+K IE DF K+ +YCS +RVIAHTQM
Sbjct: 124 KSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 66.9 bits (156), Expect = 2e-11
Identities = 34/53 (64%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = +1
Query: 655 VFAQDEMIDCIGVTKGKXYKGVTFSLAHKEXTP*K-HKGLRKVACIGPWHPSR 810
V A +MID IGVT+G +KGVT S H + P K HKGLRKVACIG WHPSR
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVT-SRWHTKKLPRKTHKGLRKVACIGAWHPSR 213
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 253 bits (619), Expect = 1e-67
Identities = 110/165 (66%), Positives = 131/165 (79%)
Frame = +1
Query: 37 QKISAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRP 216
+K SAPRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+P
Sbjct: 4 RKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKP 63
Query: 217 GSKINKKEIVEAVTIIETPPMVFVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWY 396
GSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 64 GSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWA 123
Query: 397 XXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQM 531
WQDE G+K IE DF K+ +YCS +RVIAHTQM
Sbjct: 124 KSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 66.9 bits (156), Expect = 2e-11
Identities = 34/53 (64%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = +1
Query: 655 VFAQDEMIDCIGVTKGKXYKGVTFSLAHKEXTP*K-HKGLRKVACIGPWHPSR 810
V A +MID IGVT+G +KGVT S H + P K HKGLRKVACIG WHPSR
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVT-SRWHTKKLPRKTHKGLRKVACIGAWHPSR 213
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 189 bits (460), Expect = 3e-48
Identities = 89/126 (70%), Positives = 104/126 (82%), Gaps = 1/126 (0%)
Frame = +1
Query: 436 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKW 615
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV W
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 98
Query: 616 AREHLEKPIPVDSVFAQDEMIDCIGVTKGKXYKGVTFSLAHKEXTP*K-HKGLRKVACIG 792
AREHLEK + VD+VFAQDEMID IGVT+G +KGVT S H + P K HKGLRKVACIG
Sbjct: 99 AREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVT-SRWHTKKLPRKTHKGLRKVACIG 157
Query: 793 PWHPSR 810
WHPSR
Sbjct: 158 AWHPSR 163
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +1
Query: 37 QKISAPRHGSMGFYPKKRSRRHRGKVKAFPK 129
+K SAPRHG MGF PKKRSR +RG++KAF K
Sbjct: 4 RKFSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 189 bits (460), Expect = 3e-48
Identities = 89/126 (70%), Positives = 104/126 (82%), Gaps = 1/126 (0%)
Frame = +1
Query: 436 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKW 615
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV W
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 98
Query: 616 AREHLEKPIPVDSVFAQDEMIDCIGVTKGKXYKGVTFSLAHKEXTP*K-HKGLRKVACIG 792
AREHLEK + VD+VFAQDEMID IGVT+G +KGVT S H + P K HKGLRKVACIG
Sbjct: 99 AREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVT-SRWHTKKLPRKTHKGLRKVACIG 157
Query: 793 PWHPSR 810
WHPSR
Sbjct: 158 AWHPSR 163
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +1
Query: 37 QKISAPRHGSMGFYPKKRSRRHRGKVKAFPK 129
+K SAPRHG MGF PKKRSR +RG++KAF K
Sbjct: 4 RKFSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
>AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical
protein F56F4.2 protein.
Length = 299
Score = 32.3 bits (70), Expect = 0.45
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 268 TPPMVFVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWY 396
T P + + GY++ G+R VW E S+ + KNW+
Sbjct: 201 TDPNGYFDIAGYVDQSSGVRGRFWVWHECFSQKYHKDPCKNWF 243
>AF016449-13|AAG24003.1| 350|Caenorhabditis elegans Serpentine
receptor, class t protein8 protein.
Length = 350
Score = 31.1 bits (67), Expect = 1.0
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = -3
Query: 764 LCFYGVXSLCANEKVTPLYXLPLVTPMQSIISSWANTESTG----IGFSRCSLAH--FTL 603
LCF V L N K+ P+Y L LV + I+S N+ +TG IG S C H F L
Sbjct: 54 LCFLAVLKL--NLKI-PVYQLMLVLSIFDILSLSVNSVATGIFDIIGISFCQCPHAIFFL 110
Query: 602 SSMVPPLSWIS 570
+ + SW+S
Sbjct: 111 GA-IGQASWMS 120
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +3
Query: 249 GCHHHRDSSDGFCRCCWIH*DPSWTTRSVDCLGGAYV*RLSTSLLQKLVQMQEEGF 416
GC + G C W + DPS T + DC +Y ++ L + V M+ GF
Sbjct: 1160 GCSSITCLNGGHCSVAWANTDPSAATTTCDCSRTSYT--GASCSLDEGVHMERSGF 1213
>AY090486-1|AAM11895.1| 551|Caenorhabditis elegans high-affinity
dicarboxylate transporterINDY3 protein.
Length = 551
Score = 29.5 bits (63), Expect = 3.2
Identities = 21/88 (23%), Positives = 37/88 (42%)
Frame = -3
Query: 791 PMQATFLRPLCFYGVXSLCANEKVTPLYXLPLVTPMQSIISSWANTESTGIGFSRCSLAH 612
P+ T L PL Y + + +++++P+Y + +S E+TG+ R +L
Sbjct: 51 PIGVTSLFPLALYPILQIVPSKQISPVYFKDSIVLFMCTLSMAMAVEATGL-HRRIALKL 109
Query: 611 FTLSSMVPPLSWISIM*AFFCRCFNSFI 528
T P+ + M C SFI
Sbjct: 110 LTKVGAKQPVMLLGFM------CITSFI 131
>Z81562-3|CAB04557.1| 352|Caenorhabditis elegans Hypothetical
protein K03D7.6 protein.
Length = 352
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 277 MVFVGVVGYIETPHGLRALLTVW 345
M FVGV+ + E P+G++ LL VW
Sbjct: 95 MFFVGVLSWFEVPNGVQ-LLIVW 116
>Z14092-1|CAA78468.2| 551|Caenorhabditis elegans Hypothetical
protein R107.1 protein.
Length = 551
Score = 27.9 bits (59), Expect = 9.7
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Frame = -3
Query: 791 PMQATFLRPLCFYGVXSLCANEKVTPLYXL-PLVTPMQSIISSWANTESTGIGFSRCSLA 615
P+ T L PL Y + + +++++P+Y +V M ++I + A E+TG+ R +L
Sbjct: 51 PIGVTSLFPLALYPILQIVPSKQISPVYFKDSIVLFMCTLIMAMA-VEATGL-HRRIALK 108
Query: 614 HFTLSSMVPPLSWISIM*AFFCRCFNSFI 528
T P+ + M C SFI
Sbjct: 109 LLTKVGAKQPVMLLGFM------CITSFI 131
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,079,849
Number of Sequences: 27780
Number of extensions: 439888
Number of successful extensions: 1227
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1213
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -