Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_FL5_P19
(737 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 0.37
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 32 0.37
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 1.5
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 30 2.0
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 2.6
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 2.6
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 2.6
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 24 2.9
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 24 2.9
Z81131-4|CAD01083.1| 415|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 28 6.0
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 6.0
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 6.0
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 6.0
U88172-5|AAB42260.1| 483|Caenorhabditis elegans Hypothetical pr... 28 7.9
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 7.9
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 28 7.9
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 28 7.9
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 28 7.9
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 28 7.9
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 28 7.9
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 7.9
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.5 bits (63), Expect(2) = 0.37
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 486 PPPPPPPXXXXKTPPXP 436
PPPPPPP PP P
Sbjct: 578 PPPPPPPMLGGPPPPPP 594
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 486 PPPPPPPXXXXKTPPXP 436
PPPPPPP PP P
Sbjct: 577 PPPPPPPPMLGGPPPPP 593
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 486 PPPPPPPXXXXKTPPXP 436
PPPPPPP PP P
Sbjct: 576 PPPPPPPPPMLGGPPPP 592
Score = 21.4 bits (43), Expect(2) = 0.37
Identities = 10/33 (30%), Positives = 10/33 (30%)
Frame = -3
Query: 564 PXXPPPXXXXXXXXXXGXXXXXXXXXPPPPPPP 466
P PP G P PPPPP
Sbjct: 533 PAPPPVSSIPPPPPIAGLLAANGTNVPIPPPPP 565
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 32.3 bits (70), Expect = 0.37
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3
Query: 486 PPPPPPPXXXXKTPPXP 436
PPPPPPP K PP P
Sbjct: 85 PPPPPPPPPTLKAPPPP 101
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -3
Query: 486 PPPPPPPXXXXKTPPXPL 433
PPPPPPP PP P+
Sbjct: 86 PPPPPPPPTLKAPPPPPI 103
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -3
Query: 486 PPPPPPPXXXXKTPPXPL 433
PPPPPPP PP P+
Sbjct: 64 PPPPPPPPPMCPPPPPPM 81
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 486 PPPPPPPXXXXKTPPXP 436
PPPPPPP PP P
Sbjct: 66 PPPPPPPMCPPPPPPMP 82
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 486 PPPPPPPXXXXKTPPXP 436
PPPPPPP PP P
Sbjct: 63 PPPPPPPPPPMCPPPPP 79
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 486 PPPPPPPXXXXKTPPXP 436
PPPPPPP PP P
Sbjct: 754 PPPPPPPPPLAAAPPQP 770
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 486 PPPPPPPXXXXKTPPXP 436
PPPPPPP PP P
Sbjct: 758 PPPPPPPPGGCPPPPPP 774
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 486 PPPPPPPXXXXKTPPXP 436
PPPPPPP PP P
Sbjct: 759 PPPPPPPGGCPPPPPPP 775
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 486 PPPPPPPXXXXKTPPXP 436
PPPPPPP PP P
Sbjct: 771 PPPPPPPGGFKGGPPPP 787
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 486 PPPPPPPXXXXKTPPXP 436
PPPPPPP K P P
Sbjct: 770 PPPPPPPPGGFKGGPPP 786
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 486 PPPPPPPXXXXKTPPXP 436
PPPPPPP PP P
Sbjct: 758 PPPPPPPPGGCPPPPPP 774
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 486 PPPPPPPXXXXKTPPXP 436
PPPPPPP PP P
Sbjct: 759 PPPPPPPGGCPPPPPPP 775
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 486 PPPPPPPXXXXKTPPXP 436
PPPPPPP PP P
Sbjct: 771 PPPPPPPGGFKGGPPPP 787
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 486 PPPPPPPXXXXKTPPXP 436
PPPPPPP K P P
Sbjct: 770 PPPPPPPPGGFKGGPPP 786
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 486 PPPPPPPXXXXKTPPXP 436
PPPPPPP PP P
Sbjct: 341 PPPPPPPPGGCPPPPPP 357
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 486 PPPPPPPXXXXKTPPXP 436
PPPPPPP PP P
Sbjct: 342 PPPPPPPGGCPPPPPPP 358
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 486 PPPPPPPXXXXKTPPXP 436
PPPPPPP PP P
Sbjct: 354 PPPPPPPGGFKGGPPPP 370
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 486 PPPPPPPXXXXKTPPXP 436
PPPPPPP K P P
Sbjct: 353 PPPPPPPPGGFKGGPPP 369
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 23.8 bits (49), Expect(2) = 2.9
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 486 PPPPPPP 466
PPPPPPP
Sbjct: 770 PPPPPPP 776
Score = 23.8 bits (49), Expect(2) = 2.9
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -3
Query: 480 PPPPPXXXXKTPPXP 436
PPPPP PP P
Sbjct: 790 PPPPPLGIIPPPPPP 804
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 23.8 bits (49), Expect(2) = 2.9
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 486 PPPPPPP 466
PPPPPPP
Sbjct: 770 PPPPPPP 776
Score = 23.8 bits (49), Expect(2) = 2.9
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -3
Query: 480 PPPPPXXXXKTPPXP 436
PPPPP PP P
Sbjct: 790 PPPPPLGIIPPPPPP 804
>Z81131-4|CAD01083.1| 415|Caenorhabditis elegans Hypothetical
protein T24D1.5 protein.
Length = 415
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 28 CLAYWVTHVISAQCPECQREKFXQXRVNGGDKIN 129
C+ +W H +S CP C+R Q V+ + I+
Sbjct: 372 CIVHWHHHALSPSCPLCRRRWSRQPDVSNMNVIS 405
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 436 GXGGGFXXXXXGGGGGG 486
G GGGF GGGGGG
Sbjct: 8 GGGGGFRGGRGGGGGGG 24
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = -3
Query: 555 PPPXXXXXXXXXXGXXXXXXXXXPPPPPPPXXXXKTPPXP 436
PPP G PPPPPPP T P
Sbjct: 274 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 313
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = -3
Query: 555 PPPXXXXXXXXXXGXXXXXXXXXPPPPPPPXXXXKTPPXP 436
PPP G PPPPPPP T P
Sbjct: 295 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 334
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = -3
Query: 555 PPPXXXXXXXXXXGXXXXXXXXXPPPPPPPXXXXKTPPXP 436
PPP G PPPPPPP T P
Sbjct: 280 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 319
>U88172-5|AAB42260.1| 483|Caenorhabditis elegans Hypothetical
protein ZK354.8 protein.
Length = 483
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -3
Query: 486 PPPPPPPXXXXKTPP 442
PPPPPPP + PP
Sbjct: 97 PPPPPPPVAPHQPPP 111
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 483 PPPPPPXXXXKTPP 442
PPPPPP +TPP
Sbjct: 138 PPPPPPPRVPRTPP 151
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -3
Query: 486 PPPPPPPXXXXKTPP 442
PPPPPPP PP
Sbjct: 9 PPPPPPPPPAASAPP 23
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -3
Query: 486 PPPPPPPXXXXKTPP 442
PPPPPPP PP
Sbjct: 9 PPPPPPPPPAASAPP 23
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -3
Query: 486 PPPPPPPXXXXKTPP 442
PPPPPPP +PP
Sbjct: 331 PPPPPPPIGGLTSPP 345
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 483 PPPPPPXXXXKTPPXP 436
PPPPPP + PP P
Sbjct: 91 PPPPPPKPTIRPPPIP 106
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 483 PPPPPPXXXXKTPPXP 436
PPPPPP + PP P
Sbjct: 313 PPPPPPKPTIRPPPIP 328
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 486 PPPPPPPXXXXKTPPXP 436
PPPPPPP TP P
Sbjct: 1341 PPPPPPPPSDDLTPVPP 1357
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,468,268
Number of Sequences: 27780
Number of extensions: 272904
Number of successful extensions: 4229
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2005
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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