Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_FL5_P13
(851 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 31 0.88
11_04_0415 - 17395988-17396161,17397349-17397444,17397489-173980... 31 1.5
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 31 1.5
05_01_0142 - 940421-940701,941262-941574 31 1.5
04_04_1049 + 30414545-30414596,30414732-30414853,30415121-304151... 31 1.5
07_03_1136 + 24218601-24218734,24218769-24219906 30 2.0
05_07_0102 + 27700395-27700426,27701034-27702087,27703205-27703420 30 2.0
07_01_0080 + 587674-588510 29 3.6
02_03_0005 + 13865016-13865025,13865247-13865374,13865467-138659... 29 3.6
04_03_0747 - 19251617-19251781,19252377-19252502,19252606-192527... 29 4.7
01_06_1678 - 39095986-39096205,39096400-39096477,39096578-390969... 29 6.2
08_02_1498 + 27553449-27553730,27553834-27553946,27554063-275541... 28 8.2
07_03_0809 - 21669632-21669637,21669871-21670131,21670573-216707... 28 8.2
04_01_0530 - 6928528-6929500,6929514-6930964 28 8.2
03_06_0327 - 33158131-33158315,33158586-33158639,33159149-331591... 28 8.2
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.5 bits (68), Expect = 0.88
Identities = 16/50 (32%), Positives = 18/50 (36%), Gaps = 3/50 (6%)
Frame = +2
Query: 692 PXXXSGXXPXXPPRGXXPXXXGA---PXPXPRGXXPPAXTPXXRGXGFPP 832
P P PP+G P P P P+G PP P G PP
Sbjct: 329 PPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPP 378
>11_04_0415 -
17395988-17396161,17397349-17397444,17397489-17398026,
17398106-17398422
Length = 374
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = -3
Query: 831 GGNPXPRXXGVXAGGXXPRGXGXGAPXXXGXXPRGGXXGXXPEXXXGXCXXGF 673
GGNP GG PRG G G P G G G P G GF
Sbjct: 5 GGNPR------GGGGGGPRGFGGGGPRGFGGGGPRGFGGGGPRGFGGGGPRGF 51
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -3
Query: 792 GGXXPRGXGXGAPXXXGXXPRGGXXGXXPEXXXGXCXXGF 673
GG PRG G G P G G G P G GF
Sbjct: 4 GGGNPRGGGGGGPRGFGGGGPRGFGGGGPRGFGGGGPRGF 43
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 4/56 (7%)
Frame = -3
Query: 831 GGNPXPRXXGVXA----GGXXPRGXGXGAPXXXGXXPRGGXXGXXPEXXXGXCXXG 676
GG PR G GG PRG G G P G G G P G G
Sbjct: 11 GGGGGPRGFGGGGPRGFGGGGPRGFGGGGPRGFGGGGPRGFGGSKPRRGNGELGCG 66
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = +2
Query: 674 NPXWQXPXXXSGXXPXXPPRGXXPXXXGAPXPXPRGXXPPAXTPXXRGXGFP 829
NP P PP+G P P P P G PP G G P
Sbjct: 26 NPYGPPPPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPPHQPQFNFGPGPP 77
>05_01_0142 - 940421-940701,941262-941574
Length = 197
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Frame = +1
Query: 661 GGXGEPPXAXSXXXFXXXPPXX--PPGXXXXXPXXPXPXPPGXXXPCXXXXXPGVRVPP 831
GG G PP PP PP P P PPG P PG PP
Sbjct: 25 GGHGYPPHQGYPPQGYPPPPGAYPPPPGAYPPPPGAYPPPPGAYPPQHGYPQPGGYPPP 83
>04_04_1049 +
30414545-30414596,30414732-30414853,30415121-30415198,
30415329-30415459,30415644-30417552,30417797-30417836,
30418194-30418259,30418583-30418734
Length = 849
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +2
Query: 683 WQXPXXXSGXXPXXPPRGXXPXXXGAPXPXPRGXXPPAXTPXXRGXGFPP 832
W P PPRG P P P PRG P P + G P
Sbjct: 471 WVPPRDKVPSWVPPPPRGNAPSWV-PPPPQPRGNAPSCVPPPPQSRGIAP 519
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = -1
Query: 842 PXXXGGTRTPGXXXXXQGXXXPGGXGXGXXGXXXXXPGGXXGGXXXKXXXDXAXGG 675
P GG R PG P G G G G PGG GG + GG
Sbjct: 100 PLGGGGARPPGGGGGGGPPSLPPGAG-GGGGARPPAPGGGGGGGAPRRVLGGGGGG 154
>05_07_0102 + 27700395-27700426,27701034-27702087,27703205-27703420
Length = 433
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/40 (45%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -3
Query: 831 GGNPXPRXXGVXAGGXXPRGXGXGAP-XXXGXXPRGGXXG 715
GGNP GG PRG G G P G PRGG G
Sbjct: 13 GGNPR------GGGGGGPRGCGGGGPRSGGGGGPRGGGGG 46
>07_01_0080 + 587674-588510
Length = 278
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +1
Query: 676 PPXAXSXXXFXXXPPXXPPGXXXXXPXXPXPXPPGXXXP 792
PP F PP PP P P P PP P
Sbjct: 79 PPRLGGDGMFRRPPPPPPPPPSSGSPPPPPPPPPPPPPP 117
>02_03_0005 +
13865016-13865025,13865247-13865374,13865467-13865994,
13866111-13866287
Length = 280
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = -2
Query: 412 VPAGGCSRVXQYHVRPPQAFRGHQPSAAAPLPCVPTQSFVDPIHPVED 269
+P+G Q P FR +Q S PC P ++ PIHP D
Sbjct: 109 IPSGAVPMHPQLQAYP--YFR-NQTSGTVSNPCTPYMAYTQPIHPPTD 153
>04_03_0747 -
19251617-19251781,19252377-19252502,19252606-19252716,
19252931-19253679,19254034-19254167,19254595-19254740,
19255166-19255336,19255977-19256828
Length = 817
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Frame = +2
Query: 677 PXWQXPXXXSGXXPXX--PPRGXXPXXXGAPXPXPRGXXPPAXTP 805
P W P P PPR P G P P P PP+ TP
Sbjct: 157 PVWAAPLPARTPTPTPSAPPRAAAPSPAGTPSPSP---IPPSSTP 198
>01_06_1678 -
39095986-39096205,39096400-39096477,39096578-39096949,
39097374-39097671,39097867-39098077,39098331-39099023
Length = 623
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +1
Query: 715 PPXXPPGXXXXXPXXPXPXPPGXXXPCXXXXXPGVRVPP 831
PP PP P P P PP P P RVPP
Sbjct: 116 PPRPPPPPPPHPPEDPPPHPP--HPPDHPPPPPPCRVPP 152
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +1
Query: 715 PPXXPPGXXXXXPXXPXPXPPGXXXPCXXXXXPGVRVP 828
PP PP P P PP PC PG R P
Sbjct: 123 PPPHPPEDPPPHPPHPPDHPP-PPPPCRVPPPPGYRQP 159
>08_02_1498 +
27553449-27553730,27553834-27553946,27554063-27554129,
27554310-27554402,27554516-27554659,27554860-27554954,
27555120-27555412,27555514-27555632,27555742-27556094,
27556177-27556286,27556403-27556512,27556802-27557671
Length = 882
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +3
Query: 315 QGSGAAALGWCPRNACGGLTWYX*TRLQPPAGT 413
QG GA A W P LTWY R PP+GT
Sbjct: 643 QGMGAVA--WKPGKDNQPLTWYR-RRFDPPSGT 672
>07_03_0809 -
21669632-21669637,21669871-21670131,21670573-21670752,
21671458-21672819
Length = 602
Score = 28.3 bits (60), Expect = 8.2
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +1
Query: 127 SLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQLDELDRQTTE 306
+L +D L+ YD+ PPDS+ V HA+ E T I+ L++ L+R T E
Sbjct: 160 NLWTQVDILILRYDK--PPDSRFVQEAL--AAHAHATEGSETTAIRL-LEVISLNRATPE 214
>04_01_0530 - 6928528-6929500,6929514-6930964
Length = 807
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 75 VSPHLCYS*CGRMRKRNITVPHDRLAPRNVRSGLPPRLQNRSQPDPA 215
+SP+LCY+ C RK+ +L+ + SGLPP++ S+ + A
Sbjct: 475 LSPNLCYAFCITSRKKT------QLSQPSNNSGLPPKIFTYSELEKA 515
>03_06_0327 -
33158131-33158315,33158586-33158639,33159149-33159180,
33159275-33159369,33159466-33159539,33159643-33159778,
33159874-33159937,33160017-33160079,33160160-33160299,
33160487-33160627,33160747-33160868,33160947-33161112,
33161194-33161313,33161580-33161651,33161787-33161843,
33162036-33162152,33162231-33162369,33162794-33162900,
33162972-33163081,33163172-33163305,33163397-33163546,
33163635-33163840,33166123-33166818
Length = 1059
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +1
Query: 661 GGXGEPPXAXSXXXFXXXPPXXPPGXXXXXPXXPXPXPP 777
GG G PP + F PP P P P P PP
Sbjct: 33 GGGGAPPYRPASG-FVWPPPGMTPRPGPPQPQYPRPGPP 70
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,298,056
Number of Sequences: 37544
Number of extensions: 476899
Number of successful extensions: 1945
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1808
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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