Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_FL5_P13
(851 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 45 1e-06
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 45 1e-06
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 44 1e-06
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 42 5e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 42 5e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 42 5e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 42 5e-06
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 42 5e-06
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 42 5e-06
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 42 5e-06
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 42 7e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 42 7e-06
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 42 1e-05
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 40 3e-05
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 40 3e-05
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 39 5e-05
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 38 9e-05
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 31 0.013
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 29 0.072
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 27 0.17
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 25 0.88
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 24 1.5
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 22 6.2
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 22 6.2
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 22 6.2
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 44.8 bits (101), Expect = 1e-06
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +2
Query: 281 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLXNAA-ATTGGDYALRARVSNNGSVS 454
+ W+D L WN E+ G ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 109 LEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCL 168
Query: 455 WI 460
++
Sbjct: 169 YV 170
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 44.8 bits (101), Expect = 1e-06
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +2
Query: 281 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLXNAA-ATTGGDYALRARVSNNGSVS 454
+ W+D L WN E+ G ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 109 LEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCL 168
Query: 455 WI 460
++
Sbjct: 169 YV 170
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 44.4 bits (100), Expect = 1e-06
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +2
Query: 281 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLXNAA-ATTGGDYALRARVSNNGSVS 454
+ W+D L WN E+ G ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 41 LEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCL 100
Query: 455 WI 460
++
Sbjct: 101 YV 102
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 42.3 bits (95), Expect = 5e-06
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +2
Query: 281 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLXNAA-ATTGGDYALRARVSNNGSVS 454
+ W+D L WN E+ G ++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 41 LEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCL 100
Query: 455 WI 460
++
Sbjct: 101 YV 102
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 42.3 bits (95), Expect = 5e-06
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +2
Query: 281 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLXNAA-ATTGGDYALRARVSNNGSVS 454
+ W+D L WN E+ G ++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 41 LEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCL 100
Query: 455 WI 460
++
Sbjct: 101 YV 102
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 42.3 bits (95), Expect = 5e-06
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +2
Query: 281 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLXNAA-ATTGGDYALRARVSNNGSVS 454
+ W+D L WN E+ G ++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 41 LEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCL 100
Query: 455 WI 460
++
Sbjct: 101 YV 102
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 42.3 bits (95), Expect = 5e-06
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +2
Query: 281 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLXNAA-ATTGGDYALRARVSNNGSVS 454
+ W+D L WN E+ G ++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 41 LEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCL 100
Query: 455 WI 460
++
Sbjct: 101 YV 102
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 42.3 bits (95), Expect = 5e-06
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +2
Query: 281 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLXNAA-ATTGGDYALRARVSNNGSVS 454
+ W+D L WN E+ G ++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 41 LEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCL 100
Query: 455 WI 460
++
Sbjct: 101 YV 102
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 42.3 bits (95), Expect = 5e-06
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +2
Query: 284 NWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVL-XNAAATTGGDYALRARVSNNGSVSW 457
+W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G V W
Sbjct: 80 SWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 139
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 42.3 bits (95), Expect = 5e-06
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Frame = +2
Query: 287 WIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLXNAAATTGGDYAL----RARVSNNGSV 451
W D +L WN E+G L V SE +W PD+VL N A G+Y + +A + G V
Sbjct: 90 WNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDV 146
Query: 452 SW 457
SW
Sbjct: 147 SW 148
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 41.9 bits (94), Expect = 7e-06
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 284 NWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVL-XNAAATTGGDYALRARVSNNGSVSW 457
+W D +L W E+G L V S+ +WRPD+VL NA A +A + + G V W
Sbjct: 84 SWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 41.9 bits (94), Expect = 7e-06
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +2
Query: 287 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLXNAAATTGGDYALRAR--VSNNGSVSW 457
W D L WNA E+ G V R+WRPD +L N A + VS+ G V W
Sbjct: 62 WTDHHLKWNASEFAGIRVIRVPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVW 121
Query: 458 I 460
+
Sbjct: 122 L 122
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 41.5 bits (93), Expect = 1e-05
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +2
Query: 281 MNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLXNAA-ATTGGDYALRARVSNNGSVS 454
+ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 78 LEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCL 137
Query: 455 WI 460
++
Sbjct: 138 YV 139
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 39.9 bits (89), Expect = 3e-05
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Frame = +2
Query: 284 NWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLXNAAATTGGDYAL----RARVSNNGS 448
+W D +L W E+G L V S+ +WRPD+VL N A G+Y + +A V +G
Sbjct: 84 SWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGL 140
Query: 449 VSW 457
V W
Sbjct: 141 VVW 143
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 39.9 bits (89), Expect = 3e-05
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Frame = +2
Query: 287 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLXNAAATTGGDYAL----RARVSNNGSV 451
W D +L WN ++G T V SE +W PD+VL N A G+Y + +A + + G V
Sbjct: 77 WNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKV 133
Query: 452 SW 457
W
Sbjct: 134 VW 135
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 39.1 bits (87), Expect = 5e-05
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 287 WIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVL-XNAAATTGGDYALRARVSNNGSVSW 457
W D + W+ E+G T L V SE +W PD+VL NA G +A + G V W
Sbjct: 77 WQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLW 135
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 38.3 bits (85), Expect = 9e-05
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Frame = +2
Query: 287 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLXNAAATTGGDYALRAR----VSNNGSV 451
W D +L W+ ++G + +++W+PD+VL N A G+Y +R + + NG V
Sbjct: 83 WTDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA---DGNYEVRYKSNVLIYPNGDV 139
Query: 452 SWI 460
W+
Sbjct: 140 LWV 142
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 31.1 bits (67), Expect = 0.013
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +2
Query: 245 SPPCEYRQIFNWMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLXN 388
S C +RQ +W+D+RL++ G+ + + R+W+PD N
Sbjct: 52 SMDCYFRQ-----SWVDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 28.7 bits (61), Expect = 0.072
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +2
Query: 245 SPPCEYRQIFNWMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLXN 388
S C +RQ +W D RLS+ S + ER+WRPD N
Sbjct: 84 SMDCYFRQ-----SWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYN 126
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 27.5 bits (58), Expect = 0.17
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2
Query: 340 PSAAAPLPCVPTQSFVDPIHPVEDLP 263
PSA AP+P +P S + + P+ ++P
Sbjct: 411 PSAGAPMPPIPNMSNMSGMPPLPNMP 436
Score = 23.0 bits (47), Expect = 3.6
Identities = 10/30 (33%), Positives = 11/30 (36%)
Frame = +2
Query: 716 PXXPPRGXXPXXXGAPXPXPRGXXPPAXTP 805
P P RG P P P PP+ P
Sbjct: 31 PQAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 25.0 bits (52), Expect = 0.88
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 58 YIILLPFLLTCAIAS-AAECENATSLSLMIDSLLAT 162
Y ILL L+TC I S + C T S + D ++AT
Sbjct: 3 YSILLSLLITCLICSPSVHC--GTRPSFVSDEMIAT 36
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 24.2 bits (50), Expect = 1.5
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +1
Query: 190 KIVVNLTLHLRHANIRES--ESTVRIQADLQLDELDRQTTELERR 318
K+ + L+ LR+ +R ES R+QAD+ L D LE R
Sbjct: 497 KLKIVLSTILRNFRVRSDVKESEFRLQADIILKRADGFKIRLEPR 541
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.2 bits (45), Expect = 6.2
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +2
Query: 401 TGGDYALRARVSNNGSVSWIKXL 469
+G + ALR N G ++W K +
Sbjct: 235 SGYEGALRCLAHNGGEIAWTKVI 257
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.2 bits (45), Expect = 6.2
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +2
Query: 401 TGGDYALRARVSNNGSVSWIKXL 469
+G + ALR N G ++W K +
Sbjct: 235 SGYEGALRCLAHNGGEIAWTKVI 257
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.2 bits (45), Expect = 6.2
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +2
Query: 401 TGGDYALRARVSNNGSVSWIKXL 469
+G + ALR N G ++W K +
Sbjct: 235 SGYEGALRCLAHNGGEIAWTKVI 257
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,227
Number of Sequences: 438
Number of extensions: 4378
Number of successful extensions: 45
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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