Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_FL5_P11
         (695 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0316 - 8878540-8878605,8880040-8880732,8881270-8881758           29   2.7  
02_05_0379 - 28454026-28454325,28454416-28454631,28454729-284549...    29   3.5  
12_02_0998 + 25126114-25126596,25129213-25129339,25129349-251294...    28   8.1  

>02_02_0316 - 8878540-8878605,8880040-8880732,8881270-8881758
          Length = 415

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -1

Query: 473 GGGGGGXXPXKKKKKG 426
           GGGGGG  P +KK+KG
Sbjct: 93  GGGGGGGPPAQKKQKG 108


>02_05_0379 -
           28454026-28454325,28454416-28454631,28454729-28454935,
           28455024-28455074
          Length = 257

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 12/16 (75%), Positives = 12/16 (75%)
 Frame = -3

Query: 474 GXGGGGGXXXKKKKKR 427
           G GGGGG   KKKKKR
Sbjct: 176 GGGGGGGDGGKKKKKR 191


>12_02_0998 +
           25126114-25126596,25129213-25129339,25129349-25129459,
           25130122-25130270,25130356-25130643,25130753-25130941,
           25131445-25131619,25132219-25132316
          Length = 539

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +2

Query: 113 PKXFWGXPPXWGXKSFFPKXEPXF 184
           P   WG PP WG  S  P   P +
Sbjct: 304 PPQTWGPPPPWGHPSNVPPGGPGY 327


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,824,423
Number of Sequences: 37544
Number of extensions: 319522
Number of successful extensions: 6348
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3971
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)