Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_FL5_P11
         (695 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr...    31   0.60 
Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical pr...    28   7.3  
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    28   7.3  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    28   7.3  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    28   7.3  

>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
           protein F15B9.4 protein.
          Length = 1140

 Score = 31.5 bits (68), Expect = 0.60
 Identities = 16/45 (35%), Positives = 16/45 (35%)
 Frame = +3

Query: 342 PPPPXXXXXGGGXPPXFFLKXXXXXXXXPFFFFFXGXXPPPPPXP 476
           PPPP      GG PP   L                G  PPPPP P
Sbjct: 539 PPPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPPPPPP 583



 Score = 28.7 bits (61), Expect = 4.2
 Identities = 15/44 (34%), Positives = 15/44 (34%)
 Frame = +1

Query: 343 PPPXXXXFXGGGPPPXFF*KXXKXXXXXPFFFFFXGXXPPPPPP 474
           PPP       GGPPP                    G  PPPPPP
Sbjct: 539 PPPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPPPPP 582



 Score = 28.3 bits (60), Expect = 5.5
 Identities = 15/45 (33%), Positives = 15/45 (33%)
 Frame = +3

Query: 342 PPPPXXXXXGGGXPPXFFLKXXXXXXXXPFFFFFXGXXPPPPPXP 476
           PPPP     GG  PP                    G  PPPPP P
Sbjct: 540 PPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPPPPPPP 584


>Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical
           protein T24B8.4 protein.
          Length = 866

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 17/43 (39%), Positives = 17/43 (39%)
 Frame = +1

Query: 346 PPXXXXFXGGGPPPXFF*KXXKXXXXXPFFFFFXGXXPPPPPP 474
           PP    F GG PPP             P F    G  PPPPPP
Sbjct: 84  PPPPPMFAGGIPPPPPM--MGGIPPPPPMF----GAPPPPPPP 120


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 16/44 (36%), Positives = 16/44 (36%)
 Frame = +1

Query: 343 PPPXXXXFXGGGPPPXFF*KXXKXXXXXPFFFFFXGXXPPPPPP 474
           PP       GG PPP             P    F G  PPPPPP
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 16/44 (36%), Positives = 16/44 (36%)
 Frame = +1

Query: 343 PPPXXXXFXGGGPPPXFF*KXXKXXXXXPFFFFFXGXXPPPPPP 474
           PP       GG PPP             P    F G  PPPPPP
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 16/44 (36%), Positives = 16/44 (36%)
 Frame = +1

Query: 343 PPPXXXXFXGGGPPPXFF*KXXKXXXXXPFFFFFXGXXPPPPPP 474
           PP       GG PPP             P    F G  PPPPPP
Sbjct: 330 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,168,649
Number of Sequences: 27780
Number of extensions: 173589
Number of successful extensions: 2050
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1236
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)