Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_FL5_P10
(1062 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.60
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.60
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.60
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 32 0.80
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.4
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 1.4
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 1.4
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.8
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 31 1.8
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 30 3.2
Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 29 4.2
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 4.2
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 4.2
Z46791-2|CAA86756.1| 283|Caenorhabditis elegans Hypothetical pr... 29 5.6
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 5.6
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 5.6
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 5.6
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 5.6
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 29 5.6
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 7.4
AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical ... 29 7.4
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 7.4
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 7.4
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 28 9.8
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 28 9.8
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 28 9.8
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 28 9.8
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 28 9.8
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 28 9.8
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.60
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 896 PPPPPXXXGGGXPPPPXXFFF 958
PPPPP GG PPPP F
Sbjct: 773 PPPPPGGFKGGPPPPPPPGMF 793
Score = 31.5 bits (68), Expect = 1.1
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 896 PPPPPXXXGGGXPPPP 943
PPPPP GG PPPP
Sbjct: 758 PPPPPPPPGGCPPPPP 773
Score = 30.7 bits (66), Expect = 1.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 692 PPPPPPXXXXXXXPPPPXXXG 754
PPPPPP PPPP G
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPG 778
Score = 30.7 bits (66), Expect = 1.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 692 PPPPPPXXXXXXXPPPPXXXG 754
PPPPPP PPPP G
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGG 779
Score = 30.7 bits (66), Expect = 1.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 692 PPPPPPXXXXXXXPPPPXXXG 754
PPPPPP PPPP G
Sbjct: 771 PPPPPPPGGFKGGPPPPPPPG 791
Score = 29.9 bits (64), Expect = 3.2
Identities = 12/18 (66%), Positives = 12/18 (66%), Gaps = 2/18 (11%)
Frame = +2
Query: 896 PPPPPXXXGG--GXPPPP 943
PPPPP GG G PPPP
Sbjct: 770 PPPPPPPPGGFKGGPPPP 787
Score = 28.3 bits (60), Expect = 9.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 896 PPPPPXXXGGGXPPPP 943
PPPPP G PPPP
Sbjct: 759 PPPPPPPGGCPPPPPP 774
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.60
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 896 PPPPPXXXGGGXPPPPXXFFF 958
PPPPP GG PPPP F
Sbjct: 773 PPPPPGGFKGGPPPPPPPGMF 793
Score = 31.5 bits (68), Expect = 1.1
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 896 PPPPPXXXGGGXPPPP 943
PPPPP GG PPPP
Sbjct: 758 PPPPPPPPGGCPPPPP 773
Score = 30.7 bits (66), Expect = 1.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 692 PPPPPPXXXXXXXPPPPXXXG 754
PPPPPP PPPP G
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPG 778
Score = 30.7 bits (66), Expect = 1.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 692 PPPPPPXXXXXXXPPPPXXXG 754
PPPPPP PPPP G
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGG 779
Score = 30.7 bits (66), Expect = 1.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 692 PPPPPPXXXXXXXPPPPXXXG 754
PPPPPP PPPP G
Sbjct: 771 PPPPPPPGGFKGGPPPPPPPG 791
Score = 29.9 bits (64), Expect = 3.2
Identities = 12/18 (66%), Positives = 12/18 (66%), Gaps = 2/18 (11%)
Frame = +2
Query: 896 PPPPPXXXGG--GXPPPP 943
PPPPP GG G PPPP
Sbjct: 770 PPPPPPPPGGFKGGPPPP 787
Score = 28.3 bits (60), Expect = 9.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 896 PPPPPXXXGGGXPPPP 943
PPPPP G PPPP
Sbjct: 759 PPPPPPPGGCPPPPPP 774
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.60
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 896 PPPPPXXXGGGXPPPPXXFFF 958
PPPPP GG PPPP F
Sbjct: 356 PPPPPGGFKGGPPPPPPPGMF 376
Score = 31.5 bits (68), Expect = 1.1
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 896 PPPPPXXXGGGXPPPP 943
PPPPP GG PPPP
Sbjct: 341 PPPPPPPPGGCPPPPP 356
Score = 30.7 bits (66), Expect = 1.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 692 PPPPPPXXXXXXXPPPPXXXG 754
PPPPPP PPPP G
Sbjct: 341 PPPPPPPPGGCPPPPPPPPPG 361
Score = 30.7 bits (66), Expect = 1.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 692 PPPPPPXXXXXXXPPPPXXXG 754
PPPPPP PPPP G
Sbjct: 342 PPPPPPPGGCPPPPPPPPPGG 362
Score = 30.7 bits (66), Expect = 1.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 692 PPPPPPXXXXXXXPPPPXXXG 754
PPPPPP PPPP G
Sbjct: 354 PPPPPPPGGFKGGPPPPPPPG 374
Score = 29.9 bits (64), Expect = 3.2
Identities = 12/18 (66%), Positives = 12/18 (66%), Gaps = 2/18 (11%)
Frame = +2
Query: 896 PPPPPXXXGG--GXPPPP 943
PPPPP GG G PPPP
Sbjct: 353 PPPPPPPPGGFKGGPPPP 370
Score = 28.3 bits (60), Expect = 9.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 896 PPPPPXXXGGGXPPPP 943
PPPPP G PPPP
Sbjct: 342 PPPPPPPGGCPPPPPP 357
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.9 bits (69), Expect = 0.80
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 896 PPPPPXXXGGGXPPPP 943
PPPPP GG PPPP
Sbjct: 579 PPPPPPMLGGPPPPPP 594
Score = 31.1 bits (67), Expect = 1.4
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 896 PPPPPXXXGGGXPPPP 943
PPPPP GG PPPP
Sbjct: 578 PPPPPPPMLGGPPPPP 593
Score = 30.7 bits (66), Expect = 1.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 692 PPPPPPXXXXXXXPPPPXXXG 754
PPPPPP PPPP G
Sbjct: 577 PPPPPPPPMLGGPPPPPPPPG 597
Score = 30.7 bits (66), Expect = 1.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 692 PPPPPPXXXXXXXPPPPXXXG 754
PPPPPP PPPP G
Sbjct: 578 PPPPPPPMLGGPPPPPPPPGG 598
Score = 29.5 bits (63), Expect = 4.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 692 PPPPPPXXXXXXXPPPP 742
PPPPPP PPPP
Sbjct: 576 PPPPPPPPPMLGGPPPP 592
Score = 28.7 bits (61), Expect = 7.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 896 PPPPPXXXGGGXPPPP 943
PPPPP G PPPP
Sbjct: 580 PPPPPMLGGPPPPPPP 595
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical protein
E02A10.2 protein.
Length = 385
Score = 31.1 bits (67), Expect = 1.4
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = -1
Query: 1047 GGGGXXKKKXXXFXXXFXPPPPPPXXXXXXKKKXXGGGGXPPPXXXGGGGG 895
GGGG PPPPPP GGGG GGGGG
Sbjct: 93 GGGGGGCGGGGGCGGGCAPPPPPPACGGGC---GGGGGGCGGGCGGGGGGG 140
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.1 bits (67), Expect = 1.4
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 896 PPPPPXXXGGGXPPPP 943
PPPPP GG PPPP
Sbjct: 84 PPPPPMFAGGIPPPPP 99
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +2
Query: 896 PPPPPXXXGGGXPPPPXXF 952
PPPPP GG PPPP F
Sbjct: 95 PPPPPMM--GGIPPPPPMF 111
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 993 PPPPPPXXXXXXKKKXXGGGGXPPPXXXGGGGG 895
PPPPPP G PPP G GG
Sbjct: 630 PPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 662
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 993 PPPPPPXXXXXXKKKXXGGGGXPPPXXXGGGGG 895
PPPPPP G PPP G GG
Sbjct: 456 PPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 488
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.8
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -2
Query: 992 PPPPPPXXXXXKKKKXXGGGGXPPXXXXGGGG 897
PPPPPP GGG GGGG
Sbjct: 302 PPPPPPPPPPPAPAPVSSGGGYSEQSSGGGGG 333
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.8
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -2
Query: 992 PPPPPPXXXXXKKKKXXGGGGXPPXXXXGGGG 897
PPPPPP GGG GGGG
Sbjct: 302 PPPPPPPPPPPAPAPVSSGGGYSEQSSGGGGG 333
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 30.7 bits (66), Expect = 1.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 692 PPPPPPXXXXXXXPPPPXXXG 754
PPPPPP PPPP G
Sbjct: 85 PPPPPPPPPTLKAPPPPPILG 105
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 30.3 bits (65), Expect = 2.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 896 PPPPPXXXGGGXPPPP 943
PPPPP G PPPP
Sbjct: 539 PPPPPVGMANGGPPPP 554
Score = 29.5 bits (63), Expect = 4.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 692 PPPPPPXXXXXXXPPPP 742
PPPPPP PPPP
Sbjct: 538 PPPPPPVGMANGGPPPP 554
Score = 29.1 bits (62), Expect = 5.6
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 896 PPPPPXXXGGGXPPPP 943
PPPP GG PPPP
Sbjct: 540 PPPPVGMANGGPPPPP 555
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.9 bits (64), Expect = 3.2
Identities = 12/18 (66%), Positives = 12/18 (66%), Gaps = 2/18 (11%)
Frame = +2
Query: 896 PPPPPXXXGGG--XPPPP 943
PPPPP GGG PPPP
Sbjct: 40 PPPPPPPCGGGYEAPPPP 57
Score = 29.5 bits (63), Expect = 4.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 692 PPPPPPXXXXXXXPPPP 742
PPPPPP PPPP
Sbjct: 41 PPPPPPCGGGYEAPPPP 57
>Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical
protein C15C6.3 protein.
Length = 541
Score = 29.5 bits (63), Expect = 4.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 692 PPPPPPXXXXXXXPPPP 742
PPPPPP PPPP
Sbjct: 479 PPPPPPENEPEEFPPPP 495
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 29.5 bits (63), Expect = 4.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 692 PPPPPPXXXXXXXPPPP 742
PPPPPP PPPP
Sbjct: 252 PPPPPPCPMPIPCPPPP 268
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.5 bits (63), Expect = 4.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 692 PPPPPPXXXXXXXPPPP 742
PPPPPP PPPP
Sbjct: 63 PPPPPPPPPPMCPPPPP 79
Score = 29.5 bits (63), Expect = 4.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 692 PPPPPPXXXXXXXPPPP 742
PPPPPP PPPP
Sbjct: 64 PPPPPPPPPMCPPPPPP 80
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.5 bits (63), Expect = 4.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 692 PPPPPPXXXXXXXPPPP 742
PPPPPP PPPP
Sbjct: 1343 PPPPPPSDDLTPVPPPP 1359
>Z46791-2|CAA86756.1| 283|Caenorhabditis elegans Hypothetical
protein C09G5.3 protein.
Length = 283
Score = 29.1 bits (62), Expect = 5.6
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +2
Query: 5 GXXGVPGENSLRKPPGFGALPXGKNQAAPIXLPXXDPXPG 124
G GVPG + PG P GK P P PG
Sbjct: 160 GEPGVPGNDGADGTPGKSGAPGGKGPQGPPGTPGRPGQPG 199
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 29.1 bits (62), Expect = 5.6
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 942 GGGGXPPPXXXGGGGG 895
GGGG PP GGGGG
Sbjct: 622 GGGGGPPRGPGGGGGG 637
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 29.1 bits (62), Expect = 5.6
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 942 GGGGXPPPXXXGGGGG 895
GGGG PP GGGGG
Sbjct: 622 GGGGGPPRGPGGGGGG 637
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.1 bits (62), Expect = 5.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 896 PPPPPXXXGGGXPPP 940
PPPPP G G PPP
Sbjct: 305 PPPPPHFMGRGMPPP 319
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.1 bits (62), Expect = 5.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 896 PPPPPXXXGGGXPPP 940
PPPPP G G PPP
Sbjct: 305 PPPPPHFMGRGMPPP 319
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 29.1 bits (62), Expect = 5.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 899 PPPPXXXGGGXPPPP 943
PPP GGG PPPP
Sbjct: 42 PPPAPACGGGAPPPP 56
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.7 bits (61), Expect = 7.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 896 PPPPPXXXGGGXPPPP 943
PPPP G G PPPP
Sbjct: 235 PPPPLPPVGAGAPPPP 250
>AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical
protein C02E7.6 protein.
Length = 70
Score = 28.7 bits (61), Expect = 7.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 896 PPPPPXXXGGGXPPPP 943
PPPP GGG PPP
Sbjct: 32 PPPPACGCGGGAAPPP 47
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.7 bits (61), Expect = 7.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 896 PPPPPXXXGGGXPPPP 943
PPPP G G PPPP
Sbjct: 221 PPPPLPPVGAGAPPPP 236
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.7 bits (61), Expect = 7.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 896 PPPPPXXXGGGXPPPP 943
PPPP G G PPPP
Sbjct: 221 PPPPLPPVGAGAPPPP 236
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 28.3 bits (60), Expect = 9.8
Identities = 12/17 (70%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
Frame = -1
Query: 942 GGGGXP-PPXXXGGGGG 895
GGGG P PP GGGGG
Sbjct: 267 GGGGYPQPPPQQGGGGG 283
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.3 bits (60), Expect = 9.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 896 PPPPPXXXGGGXPPPP 943
PPPP GG PPPP
Sbjct: 336 PPPPGMRYPGGMPPPP 351
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 28.3 bits (60), Expect = 9.8
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -1
Query: 993 PPPPPPXXXXXXKKKXXGGGGXPPP 919
PPPPPP + GG PPP
Sbjct: 770 PPPPPPPSAIPLPPRLQGGIPPPPP 794
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.3 bits (60), Expect = 9.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 896 PPPPPXXXGGGXPPPP 943
PPPP GG PPPP
Sbjct: 346 PPPPGMRYPGGMPPPP 361
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 28.3 bits (60), Expect = 9.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 896 PPPPPXXXGGGXPPPP 943
PPPP G G PPPP
Sbjct: 723 PPPPQQQRGYGYPPPP 738
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 28.3 bits (60), Expect = 9.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 896 PPPPPXXXGGGXPPPP 943
PPPP G G PPPP
Sbjct: 723 PPPPQQQRGYGYPPPP 738
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 28.3 bits (60), Expect = 9.8
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -1
Query: 993 PPPPPPXXXXXXKKKXXGGGGXPPP 919
PPPPPP + GG PPP
Sbjct: 770 PPPPPPPSAIPLPPRLQGGIPPPPP 794
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,992,403
Number of Sequences: 27780
Number of extensions: 503924
Number of successful extensions: 6156
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3499
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2835266498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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