Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_FL5_P09
         (848 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016663-5|AAC70880.1|  864|Caenorhabditis elegans Hypothetical ...    40   0.002
AC087794-3|AAG53700.1|  417|Caenorhabditis elegans Hypothetical ...    34   0.11 
U58735-1|AAC48148.1|  891|Caenorhabditis elegans Hypothetical pr...    33   0.19 
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans...    33   0.19 
AF025462-7|AAB71003.1|  805|Caenorhabditis elegans Hypothetical ...    33   0.19 
Z46381-10|CAE17898.2|  366|Caenorhabditis elegans Hypothetical p...    31   0.78 
U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z78239-4|CAI79141.2|  301|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z71185-5|CAA94911.1| 1078|Caenorhabditis elegans Hypothetical pr...    29   4.2  
AF024494-8|ABQ13073.1|  256|Caenorhabditis elegans Hypothetical ...    29   4.2  
AF026213-9|AAB71302.2|  615|Caenorhabditis elegans Protein kinas...    28   7.3  
Z82074-1|CAB04928.2|  480|Caenorhabditis elegans Hypothetical pr...    28   9.6  
AL132864-6|CAB63395.1|  480|Caenorhabditis elegans Hypothetical ...    28   9.6  

>AF016663-5|AAC70880.1|  864|Caenorhabditis elegans Hypothetical
           protein F21E9.5 protein.
          Length = 864

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 22/69 (31%), Positives = 37/69 (53%)
 Frame = +3

Query: 9   EALVELLRLRGMPEQFCGYIAHLYDTASTTLAVNNEMSSPVKVGRGVRQGDPLSPILFNV 188
           E + + L+ +G+   +   +   Y   STT    ++ +  V V RGVRQGDP+SP LF+ 
Sbjct: 477 EDVWDSLQQQGVQRGYINLLQECYTDCSTTFTPFHK-NVTVPVTRGVRQGDPISPNLFSA 535

Query: 189 VMDLILASL 215
            ++ +   L
Sbjct: 536 CLEHVFRQL 544


>AC087794-3|AAG53700.1|  417|Caenorhabditis elegans Hypothetical
           protein Y32G9A.9 protein.
          Length = 417

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 20/69 (28%), Positives = 34/69 (49%)
 Frame = +3

Query: 9   EALVELLRLRGMPEQFCGYIAHLYDTASTTLAVNNEMSSPVKVGRGVRQGDPLSPILFNV 188
           +A+ + L  +G  E +   +   Y   +T         + V V +GVRQGDP+SP LF+ 
Sbjct: 54  QAIWKSLDEQGADEAYIDLLKECYKNCTTNFTPFLRPIT-VPVTKGVRQGDPISPNLFSA 112

Query: 189 VMDLILASL 215
            ++ +   L
Sbjct: 113 CLEHVFRKL 121


>U58735-1|AAC48148.1|  891|Caenorhabditis elegans Hypothetical
           protein F20B4.7 protein.
          Length = 891

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = +3

Query: 129 VKVGRGVRQGDPLSPILFNVVMDLILASL 215
           V V +GVRQGDP+SP LF+  ++ +   L
Sbjct: 571 VPVTKGVRQGDPISPNLFSACLEHVFRKL 599


>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
           transcriptase protein.
          Length = 1066

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = +3

Query: 129 VKVGRGVRQGDPLSPILFNVVMDLILASL 215
           V V +GVRQGDP+SP LF+  ++ +   L
Sbjct: 742 VPVTKGVRQGDPISPNLFSACLEHVFRKL 770


>AF025462-7|AAB71003.1|  805|Caenorhabditis elegans Hypothetical
           protein K10F12.5 protein.
          Length = 805

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = +3

Query: 129 VKVGRGVRQGDPLSPILFNVVMDLILASL 215
           V V +GVRQGDP+SP LF+  ++ +   L
Sbjct: 481 VPVTKGVRQGDPISPNLFSACLEHVFRKL 509


>Z46381-10|CAE17898.2|  366|Caenorhabditis elegans Hypothetical
           protein M01F1.9 protein.
          Length = 366

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -2

Query: 628 IR*ALKISNLCWGLRGALEML-FRALLILCSNVTHPEASKSTPRYRHRST 482
           IR  + +SNL  G +G +E L + +L ++C       +S STP  R R T
Sbjct: 21  IRITVTVSNLSRGKQGVVEQLAWGSLQLICERTIGATSSNSTPSSRPRPT 70


>U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical
           protein F31A9.6 protein.
          Length = 358

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +3

Query: 63  YIAHLYDTASTTLAVNNEMSSPVKVGRGVRQGDPLSPILFNVVMDLILASLPERV 227
           ++       S  + +   +SS      GV QG  LSP+LF + ++ I + LPE+V
Sbjct: 49  WVNEFLSNRSFRVRIGQTLSSRKFATCGVPQGAVLSPLLFGIYVNDISSILPEKV 103


>Z78239-4|CAI79141.2|  301|Caenorhabditis elegans Hypothetical
           protein C30G7.3 protein.
          Length = 301

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -1

Query: 215 QGSQDEVHHHVEEYRRQRVPLTNPSSHFYRAAHFIVH 105
           Q   D+V     + R++RV  +NP     + AHFI+H
Sbjct: 263 QEIDDDVKDFNCQMRQRRVKASNPGGTVTKVAHFIIH 299


>Z71185-5|CAA94911.1| 1078|Caenorhabditis elegans Hypothetical
           protein C35A5.8 protein.
          Length = 1078

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +3

Query: 570 ISRAPLKPQQRLEILRAHLIPRFQHGFVLGNIS 668
           I+R PLK   RLE+   H++ +F+  +++  I+
Sbjct: 523 IARFPLKGNLRLEVSFIHMLEQFRRAYIMDQIT 555


>AF024494-8|ABQ13073.1|  256|Caenorhabditis elegans Hypothetical
           protein C38C3.3 protein.
          Length = 256

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -1

Query: 215 QGSQDEVHHHVEEYRRQRVPLTNPSSHFYRAAHFIVH 105
           Q   D+V     + R +RV  +NP+    + AHFI+H
Sbjct: 218 QEIDDDVKDFNWQMRERRVKASNPAGTATKVAHFIIH 254


>AF026213-9|AAB71302.2|  615|Caenorhabditis elegans Protein kinase
           protein 9, isoform b protein.
          Length = 615

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = -3

Query: 351 SAYRHSPQQRWTPASLPSTPQAGLGRQHRPER 256
           SAY+      WTP+  PST  AG     R  R
Sbjct: 34  SAYKSRKYSTWTPSPQPSTMNAGTQTDFRTAR 65


>Z82074-1|CAB04928.2|  480|Caenorhabditis elegans Hypothetical
           protein W06H12.1 protein.
          Length = 480

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 742 TSAGSLSHCPTAFRIWTSSIXNRSSEMFPSTKP 644
           TS G LS C  +    T+++ +RSSE  P  KP
Sbjct: 84  TSVGLLSDCHDSATSTTTTVSHRSSEEPPRRKP 116


>AL132864-6|CAB63395.1|  480|Caenorhabditis elegans Hypothetical
           protein W06H12.1 protein.
          Length = 480

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 742 TSAGSLSHCPTAFRIWTSSIXNRSSEMFPSTKP 644
           TS G LS C  +    T+++ +RSSE  P  KP
Sbjct: 84  TSVGLLSDCHDSATSTTTTVSHRSSEEPPRRKP 116


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,243,046
Number of Sequences: 27780
Number of extensions: 451221
Number of successful extensions: 1351
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1351
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)