Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_FL5_P09
         (848 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    26   0.38 
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         24   2.0  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    24   2.0  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    24   2.0  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   3.6  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   4.7  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   8.2  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 26.2 bits (55), Expect = 0.38
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -1

Query: 257 GHEFHLQPIPDPLRQGSQDEVHHHVEEYRRQ 165
           GH+   QP   PL +    E HH +   RRQ
Sbjct: 60  GHDDREQPSVYPLLRFENPETHHPIRHGRRQ 90


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 677 IXNARCPNPESSRTVAK 727
           I N RC NP++ RT  K
Sbjct: 411 ILNTRCENPDNDRTPFK 427


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 677 IXNARCPNPESSRTVAK 727
           I N RC NP++ RT  K
Sbjct: 411 ILNTRCENPDNDRTPFK 427


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 677 IXNARCPNPESSRTVAK 727
           I N RC NP++ RT  K
Sbjct: 411 ILNTRCENPDNDRTPFK 427


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = +3

Query: 447 NIGGKPLRQ-VSCVERWRYLGVDFE 518
           N  GK L   ++ + +W+YL  DF+
Sbjct: 26  NSSGKNLTNTLNVIHKWKYLDYDFD 50


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 776 RXVNDPIGGSEHPG 817
           R +N  IGG +HPG
Sbjct: 875 RTINCEIGGLQHPG 888


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 60  GYIAHLYDTASTTLAVNNEMSS 125
           GY      T STT++V NE+S+
Sbjct: 3   GYYQMKQITNSTTMSVKNEIST 24


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 242,486
Number of Sequences: 438
Number of extensions: 5411
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)