Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_FL5_O17
         (1146 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL355338-1|CAH70366.2|  663|Homo sapiens Zic family member 5 (od...    26   2.0  
AF378304-1|AAK55418.1|  639|Homo sapiens zinc family member 5 pr...    26   2.0  
Y08766-1|CAA70019.1|  638|Homo sapiens SF1-Bo isoform protein.         26   4.4  

>AL355338-1|CAH70366.2|  663|Homo sapiens Zic family member 5
           (odd-paired homolog, Drosophila) protein.
          Length = 663

 Score = 25.8 bits (54), Expect(2) = 2.0
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -1

Query: 957 APPPFXXXXXXXXXPPPPPP 898
           APPP          PPPPPP
Sbjct: 149 APPPPAPPLPPTPSPPPPPP 168



 Score = 25.8 bits (54), Expect(2) = 2.0
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = -1

Query: 915 PPPPPPXXXXXXXXXXXXGGGG 850
           PPPPPP            GGGG
Sbjct: 166 PPPPPPPPALSGYTTTNSGGGG 187


>AF378304-1|AAK55418.1|  639|Homo sapiens zinc family member 5
           protein protein.
          Length = 639

 Score = 25.8 bits (54), Expect(2) = 2.0
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -1

Query: 957 APPPFXXXXXXXXXPPPPPP 898
           APPP          PPPPPP
Sbjct: 125 APPPPAPPLPPTPSPPPPPP 144



 Score = 25.8 bits (54), Expect(2) = 2.0
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = -1

Query: 915 PPPPPPXXXXXXXXXXXXGGGG 850
           PPPPPP            GGGG
Sbjct: 142 PPPPPPPPALSGYTTTNSGGGG 163


>Y08766-1|CAA70019.1|  638|Homo sapiens SF1-Bo isoform protein.
          Length = 638

 Score = 26.2 bits (55), Expect(2) = 4.4
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = -3

Query: 916 PPPPPPPXXXXXXXXXXXGGGG 851
           PPPPPPP           GG G
Sbjct: 583 PPPPPPPPGSAGMMIPPRGGDG 604



 Score = 24.2 bits (50), Expect(2) = 4.4
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = -3

Query: 952 PPFXXXXXXXKXPPPPPPP 896
           PP          PPPPPPP
Sbjct: 570 PPGVQPPLPPGAPPPPPPP 588


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,255,129
Number of Sequences: 237096
Number of extensions: 2655186
Number of successful extensions: 26252
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11745
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 16032164540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)