Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_FL5_O15
(900 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 40 3e-05
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 40 4e-05
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 39 7e-05
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 38 1e-04
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 37 3e-04
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 36 4e-04
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 36 5e-04
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 35 9e-04
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 35 9e-04
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 35 9e-04
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 35 9e-04
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 35 9e-04
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 35 9e-04
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 35 9e-04
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 35 9e-04
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 34 0.002
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 32 0.008
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 31 0.019
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 27 0.18
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 24 2.2
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 39.9 bits (89), Expect = 3e-05
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +3
Query: 210 LXHANIRESESTXRILADLXXNWIDXRLXWNAGEWGCSTWL-VSSERLWRPDVVLL-XAG 383
L N++ T + + W D +L WN E+G L V SE +W PD+VL A
Sbjct: 70 LIEMNLKNQVMTTNVWVE--QRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD 127
Query: 384 ATTAGDXSLRARVSXNGXVSW 446
+A + G VSW
Sbjct: 128 GNYEVTLMTKATLKYTGDVSW 148
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 39.5 bits (88), Expect = 4e-05
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +3
Query: 273 NWIDXRLXWNAGEWGCSTWL-VSSERLWRPDVVLL-XAGATTAGDXSLRARVSXNGXVSW 446
+W D +L W+ E+G L V S+ +WRPD+VL A + +A ++ G V W
Sbjct: 80 SWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 139
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 38.7 bits (86), Expect = 7e-05
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +3
Query: 273 NWIDXRLXWNAGEWGCSTWL-VSSERLWRPDVVLL-XAGATTAGDXSLRARVSXNGXVSW 446
+W D +L W E+G L V S+ +WRPD+VL A + +A + G V W
Sbjct: 84 SWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 37.9 bits (84), Expect = 1e-04
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +3
Query: 273 NWIDXRLXWNAGEWGCSTWL-VSSERLWRPDVVLL-XAGATTAGDXSLRARVSXNGXVSW 446
+W D +L W E+G L V S+ +WRPD+VL A +A V +G V W
Sbjct: 84 SWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNYEVTLMTKATVYYSGLVVW 143
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 36.7 bits (81), Expect = 3e-04
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +3
Query: 153 RTIGSLPPHSXIVXNLTL-HLXHANIRESESTXRILADLXXNWIDXRLXWNAGEWG-CST 326
R +G+ + L L L N++ T + + W D +L WN ++G T
Sbjct: 37 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVWVE--QEWNDYKLKWNPDDYGGVDT 94
Query: 327 WLVSSERLWRPDVVL 371
V SE +W PD+VL
Sbjct: 95 LHVPSEHIWLPDIVL 109
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 36.3 bits (80), Expect = 4e-04
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +3
Query: 264 LXXNWIDXRLXWNAGEWGCSTWL-VSSERLWRPDVVLLXAGATTAGDXSL-RARVSXNGX 437
L W D + W+ E+G T L V SE +W PD+VL G ++ +A + G
Sbjct: 73 LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGK 132
Query: 438 VSW 446
V W
Sbjct: 133 VLW 135
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 35.9 bits (79), Expect = 5e-04
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
Frame = +3
Query: 276 WIDXRLXWNAGEW-GCSTWLVSSERLWRPDVVLLXAGATTAGDXSLRAR--VSXNGXVSW 446
W D L WNA E+ G V R+WRPD +L + VS G V W
Sbjct: 62 WTDHHLKWNASEFAGIRVIRVPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVW 121
Query: 447 I 449
+
Sbjct: 122 L 122
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 35.1 bits (77), Expect = 9e-04
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 264 LXXNWIDXRLXWNAGEW-GCSTWLVSSERLWRPDVVL 371
L W+D L WN E+ G ++ +LW+PD+++
Sbjct: 39 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILM 75
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 35.1 bits (77), Expect = 9e-04
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 264 LXXNWIDXRLXWNAGEW-GCSTWLVSSERLWRPDVVL 371
L W+D L WN E+ G ++ +LW+PD+++
Sbjct: 39 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILM 75
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 35.1 bits (77), Expect = 9e-04
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 264 LXXNWIDXRLXWNAGEW-GCSTWLVSSERLWRPDVVL 371
L W+D L WN E+ G ++ +LW+PD+++
Sbjct: 39 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILM 75
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 35.1 bits (77), Expect = 9e-04
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 264 LXXNWIDXRLXWNAGEW-GCSTWLVSSERLWRPDVVL 371
L W+D L WN E+ G ++ +LW+PD+++
Sbjct: 39 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILM 75
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 35.1 bits (77), Expect = 9e-04
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 264 LXXNWIDXRLXWNAGEW-GCSTWLVSSERLWRPDVVL 371
L W+D L WN E+ G ++ +LW+PD+++
Sbjct: 39 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILM 75
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 35.1 bits (77), Expect = 9e-04
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 264 LXXNWIDXRLXWNAGEW-GCSTWLVSSERLWRPDVVL 371
L W+D L WN E+ G ++ +LW+PD+++
Sbjct: 39 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILM 75
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 35.1 bits (77), Expect = 9e-04
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 264 LXXNWIDXRLXWNAGEW-GCSTWLVSSERLWRPDVVL 371
L W+D L WN E+ G ++ +LW+PD+++
Sbjct: 107 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILM 143
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 35.1 bits (77), Expect = 9e-04
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 264 LXXNWIDXRLXWNAGEW-GCSTWLVSSERLWRPDVVL 371
L W+D L WN E+ G ++ +LW+PD+++
Sbjct: 107 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILM 143
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 33.9 bits (74), Expect = 0.002
Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Frame = +3
Query: 222 NIRESESTXRILADLXXNWIDXRLXWNAGEW-GCSTWLVSSERLWRPDVVLL-XAGATTA 395
N+ E + L W D +L W+ ++ G + +++W+PD+VL A
Sbjct: 65 NVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNADGNYE 124
Query: 396 GDXSLRARVSXNGXVSWI 449
+ NG V W+
Sbjct: 125 VRYKSNVLIYPNGDVLWV 142
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 31.9 bits (69), Expect = 0.008
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 264 LXXNWIDXRLXWNAGEWGCSTWL-VSSERLWRPDVVL 371
L W D + WN ++G L + RLW+PDV++
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLM 112
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 30.7 bits (66), Expect = 0.019
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +3
Query: 204 LHLXHANIRESESTXRILADLXXNWIDXRLXWNAGEW-GCSTWLVSSERLWRPDVVL 371
L + H N+ E T L W L W + E+ ++ V S +W PD+V+
Sbjct: 66 LSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 27.5 bits (58), Expect = 0.18
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +3
Query: 225 IRESESTXRILADLXXNWIDXRLXWNAGEWGCSTWLVSSERLWRPD 362
I E + T + +W+D RL + G+ + + R+W+PD
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPD 89
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 23.8 bits (49), Expect = 2.2
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +3
Query: 273 NWIDXRLXWNAGEWGCSTWLVSSERLWRPD 362
+W D RL + S + ER+WRPD
Sbjct: 92 SWRDSRLSFLGPIKSLSLSIKMLERIWRPD 121
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,731
Number of Sequences: 438
Number of extensions: 2858
Number of successful extensions: 38
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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