Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_FL5_N01
         (878 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    25   0.70 
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         23   3.7  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   3.7  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   3.7  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   3.7  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   3.7  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    23   3.7  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    23   3.7  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   6.5  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   8.6  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 25.4 bits (53), Expect = 0.70
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +2

Query: 464 NCGGPGNSSAGSAV 505
           N GGPG+SSAG  V
Sbjct: 18  NLGGPGSSSAGGVV 31



 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +1

Query: 238 LRMLDVQIRKAVGQWLRLPADVPKAYYHAAVQ 333
           L ++ V +  + G+WL     +PK   +A+V+
Sbjct: 62  LSLVVVTVAISTGEWLLTEEKLPKTSSNASVE 93


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 237 IENARCPNPESSRTVAK 287
           I N RC NP++ RT  K
Sbjct: 411 ILNTRCENPDNDRTPFK 427


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +2

Query: 674 GRWNFRAHFCEXW 712
           G+W F  H C+ W
Sbjct: 100 GKWIFGIHLCKLW 112


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +2

Query: 674 GRWNFRAHFCEXW 712
           G+W F  H C+ W
Sbjct: 100 GKWIFGIHLCKLW 112


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = +2

Query: 665 ELDGRWNFRAHFCEXW 712
           E+ G W+F    C+ W
Sbjct: 102 EISGNWSFGTIMCDLW 117


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +2

Query: 674 GRWNFRAHFCEXW 712
           G+W F  H C+ W
Sbjct: 100 GKWIFGIHLCKLW 112


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 237 IENARCPNPESSRTVAK 287
           I N RC NP++ RT  K
Sbjct: 411 ILNTRCENPDNDRTPFK 427


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 237 IENARCPNPESSRTVAK 287
           I N RC NP++ RT  K
Sbjct: 411 ILNTRCENPDNDRTPFK 427


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +2

Query: 668 LDGRWNFRAHFCEXW 712
           L+ RW F   +C+ W
Sbjct: 108 LENRWLFTTDWCDVW 122


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +2

Query: 665 ELDGRWNFRAHFCEXW 712
           +L G W F   FC+ W
Sbjct: 86  DLLGYWVFGPRFCDTW 101


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 249,151
Number of Sequences: 438
Number of extensions: 5760
Number of successful extensions: 19
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)