Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_FL5_M16
(833 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 40 2e-05
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 40 2e-05
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 40 3e-05
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 40 3e-05
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 40 3e-05
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 40 3e-05
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 40 3e-05
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 40 3e-05
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 40 3e-05
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 40 4e-05
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 39 5e-05
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 39 5e-05
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 39 5e-05
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 39 7e-05
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 38 9e-05
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 38 2e-04
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 38 2e-04
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 36 5e-04
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 35 0.001
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 34 0.002
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 33 0.002
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 29 0.053
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 29 0.053
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 28 0.12
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 27 0.21
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 27 0.28
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 27 0.28
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 27 0.28
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 26 0.37
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 26 0.49
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 23 2.6
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 23 2.6
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 23 2.6
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.0
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 40.3 bits (90), Expect = 2e-05
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +3
Query: 144 STRSSQRTIGSLPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW 323
S + +R + + ++ +TL + ++ E + A L++ W+D L WN E+
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 324 -GCSTWLVSSERLWRPDVVLLN 386
G ++ +LW+PD+++ N
Sbjct: 124 GGVKDLRITPNKLWKPDILMYN 145
Score = 29.1 bits (62), Expect = 0.053
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +1
Query: 406 GXYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDXQTCTXXFGSRMHNSDEMD 573
G Y V++NGS ++ + + + +P D Q C FGS ++ +++D
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 208
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 40.3 bits (90), Expect = 2e-05
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +3
Query: 144 STRSSQRTIGSLPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW 323
S + +R + + ++ +TL + ++ E + A L++ W+D L WN E+
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 324 -GCSTWLVSSERLWRPDVVLLN 386
G ++ +LW+PD+++ N
Sbjct: 124 GGVKDLRITPNKLWKPDILMYN 145
Score = 29.1 bits (62), Expect = 0.053
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +1
Query: 406 GXYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDXQTCTXXFGSRMHNSDEMD 573
G Y V++NGS ++ + + + +P D Q C FGS ++ +++D
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 208
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 39.9 bits (89), Expect = 3e-05
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 386
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYN 77
Score = 27.5 bits (58), Expect = 0.16
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +1
Query: 406 GXYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDXQTCTXXFGSRMHNSDEMD 573
G Y V+++GS ++ + M + +P D Q C FGS ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 39.9 bits (89), Expect = 3e-05
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 386
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYN 77
Score = 26.2 bits (55), Expect = 0.37
Identities = 13/56 (23%), Positives = 27/56 (48%)
Frame = +1
Query: 406 GXYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDXQTCTXXFGSRMHNSDEMD 573
G Y V+++GS ++ + + + +P D Q C FGS ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 39.9 bits (89), Expect = 3e-05
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 386
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYN 77
Score = 26.6 bits (56), Expect = 0.28
Identities = 13/56 (23%), Positives = 27/56 (48%)
Frame = +1
Query: 406 GXYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDXQTCTXXFGSRMHNSDEMD 573
G Y V+++GS ++ + + + +P D Q C FGS ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 39.9 bits (89), Expect = 3e-05
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 386
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYN 77
Score = 26.2 bits (55), Expect = 0.37
Identities = 13/56 (23%), Positives = 27/56 (48%)
Frame = +1
Query: 406 GXYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDXQTCTXXFGSRMHNSDEMD 573
G Y V+++GS ++ + + + +P D Q C FGS ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 39.9 bits (89), Expect = 3e-05
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 386
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYN 77
Score = 27.9 bits (59), Expect = 0.12
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +1
Query: 406 GXYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDXQTCTXXFGSRMHNSDEMD 573
G Y V+++GS ++ + M + +P D Q C FGS ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 39.9 bits (89), Expect = 3e-05
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 386
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYN 77
Score = 28.7 bits (61), Expect = 0.070
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +1
Query: 406 GXYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDXQTCTXXFGSRMHNSDEMD 573
G Y V++NGS ++ + + + +P D Q C FGS ++ +++D
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 140
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 39.9 bits (89), Expect = 3e-05
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +3
Query: 195 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 362
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 363 RPDVVLLN 386
PD+VL N
Sbjct: 104 LPDIVLYN 111
Score = 27.5 bits (58), Expect = 0.16
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = +1
Query: 421 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDXQTCTXXFGSRMHNSDEMDXRD*XKNI 597
+A + G V W + + + +P D QTC FGS ++ ++D + +N+
Sbjct: 124 KAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQIDLKHINQNM 182
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 39.5 bits (88), Expect = 4e-05
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 386
++ +W D +L W+ E+G L V S+ +WRPD+VL N
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYN 115
Score = 32.3 bits (70), Expect = 0.006
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +1
Query: 415 ALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDXQTCTXXFGSRMHNSDEMDXR 579
A +A ++ G V W + + ++ +P D QTC FGS ++ ++D R
Sbjct: 126 ATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLR 180
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 39.1 bits (87), Expect = 5e-05
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +3
Query: 192 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 365
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 366 PDVVLLN 386
PD+VL N
Sbjct: 113 PDIVLYN 119
Score = 29.1 bits (62), Expect = 0.053
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +1
Query: 421 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDXQTCTXXFGSRMHNSDEMDXR 579
+A V +G V W + S+ ++ +P D QTC GS ++ ++D R
Sbjct: 132 KATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVLKLGSWTYDGFKVDLR 184
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 39.1 bits (87), Expect = 5e-05
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +3
Query: 192 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 365
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 366 PDVVLLN 386
PD+VL N
Sbjct: 113 PDIVLYN 119
Score = 32.3 bits (70), Expect = 0.006
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +1
Query: 415 ALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDXQTCTXXFGSRMHNSDEMDXR 579
A +A + + G V W + + ++ +P D QTC FGS ++ ++D R
Sbjct: 130 ATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGFKVDLR 184
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 39.1 bits (87), Expect = 5e-05
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +3
Query: 162 RTIGSLPPDSKIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CST 335
R +G+ + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 37 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 94
Query: 336 WLVSSERLWRPDVVLLN 386
V SE +W PD+VL N
Sbjct: 95 LHVPSEHIWLPDIVLYN 111
Score = 27.1 bits (57), Expect = 0.21
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +1
Query: 421 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDXQTCTXXFGSRMHNSDEMDXR 579
+A + + G V W + + ++ +P D QTC FGS ++ +D R
Sbjct: 124 KAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYTVDLR 176
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 38.7 bits (86), Expect = 7e-05
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 386
++ W D +L WN E+G L V SE +W PD+VL N
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYN 124
Score = 31.9 bits (69), Expect = 0.008
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +1
Query: 421 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDXQTCTXXFGSRMHNSDEMDXR 579
+A + G VSW + + ++ +P D Q+C FGS +N ++D +
Sbjct: 137 KATLKYTGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVDLK 189
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 38.3 bits (85), Expect = 9e-05
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +3
Query: 195 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 371
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 372 VVLLN 386
+L N
Sbjct: 92 TILYN 96
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/48 (20%), Positives = 23/48 (47%)
Frame = +1
Query: 430 VSNNGSVSWIKRLDISTPISMQLDNWPNDXQTCTXXFGSRMHNSDEMD 573
VS+ G V W+ + + ++ +P D Q C + S ++ +++
Sbjct: 113 VSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWASWTYDGYQLE 160
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 37.5 bits (83), Expect = 2e-04
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 201 VNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 377
++ L ++H N+ E TV L++ W L+W + E+ ++ V S +W PD+V
Sbjct: 62 IDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIV 121
Query: 378 L 380
+
Sbjct: 122 M 122
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +1
Query: 505 WPNDXQTCTXXFGSRMHNSDEM 570
WP D CT S H S+E+
Sbjct: 166 WPYDILNCTIHIASWSHGSNEI 187
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 37.5 bits (83), Expect = 2e-04
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +3
Query: 192 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 365
K+ VN L ++ N+ E ++ L+ W D +L W+ ++ G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 366 PDVVLLN 386
PD+VL N
Sbjct: 111 PDIVLFN 117
Score = 33.1 bits (72), Expect = 0.003
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +1
Query: 412 YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDXQTCTXXFGSRMHNSDEM 570
Y + NG V W+ + ++ + +P D QTC FGS N D++
Sbjct: 127 YKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQV 179
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 35.9 bits (79), Expect = 5e-04
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +3
Query: 159 QRTIGSLPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTW 338
+R +G+ + LTL ++ ++ E + L++ W D + WN ++G
Sbjct: 39 ERPVGNESEPLVLSFGLTL-MQIIDVDEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRD 97
Query: 339 L-VSSERLWRPDVVLLN 386
L + RLW+PDV++ N
Sbjct: 98 LRIPPHRLWKPDVLMYN 114
Score = 28.7 bits (61), Expect = 0.070
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = +1
Query: 406 GXYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDXQTCTXXFGSRMHNSDEMD 573
G Y V NNG+ ++ + + + +P D Q C FGS ++ ++D
Sbjct: 122 GTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLD 177
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 34.7 bits (76), Expect = 0.001
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 427 RVSNNGSVSWIKRLDISTPISMQLDNWPNDXQTCTXXFGS 546
R+S +G + + RL I M+L N+P D Q+C GS
Sbjct: 143 RISQDGDILYSMRLTIKAKCPMELRNFPMDRQSCPLILGS 182
Score = 28.3 bits (60), Expect = 0.092
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 276 QMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 386
+ +W D RLS+ S + ER+WRPD N
Sbjct: 90 RQSWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYN 126
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 33.9 bits (74), Expect = 0.002
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 427 RVSNNGSVSWIKRLDISTPISMQLDNWPNDXQTCTXXFGS 546
R+ +G V + RL I M L+N+P D Q C FGS
Sbjct: 111 RLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
Score = 32.3 bits (70), Expect = 0.006
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +3
Query: 234 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 386
I E + T + + +W+D+RL++ G+ + + R+W+PD N
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 33.5 bits (73), Expect = 0.002
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 430 VSNNGSVSWIKRLDISTPISMQLDNWPNDXQTCTXXFGSRMHNSDEMD 573
V ++GSVS + + + +WP D C FGS +H+ +E++
Sbjct: 151 VFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVN 198
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 29.1 bits (62), Expect = 0.053
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 427 RVSNNGSVSWIKRLDISTPISMQLDNWPNDXQTCTXXFGSRMHNSDEM 570
R+ NGSV + R+ ++ M L +P D Q C+ S +D++
Sbjct: 141 RIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDL 188
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 29.1 bits (62), Expect = 0.053
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 427 RVSNNGSVSWIKRLDISTPISMQLDNWPNDXQTCTXXFGSRMHNSDEM 570
R+ NGSV + R+ ++ M L +P D Q C+ S +D++
Sbjct: 141 RIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDL 188
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 27.9 bits (59), Expect = 0.12
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 427 RVSNNGSVSWIKRLDISTPISMQLDNWPNDXQTCT 531
R+S +GSV++ R + M L +P D Q CT
Sbjct: 142 RLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCT 176
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 27.1 bits (57), Expect = 0.21
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +1
Query: 430 VSNNGSVSWIKRLDISTPISMQLDNWPNDXQTCTXXFGSRMHNSDEM 570
+ +G V RL + ++L+ +P D Q C F S HN +M
Sbjct: 124 IDPSGMVRLNTRLQATLNCGLRLEKFPFDVQECPLIFESWTHNVLDM 170
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 26.6 bits (56), Expect = 0.28
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 427 RVSNNGSVSWIKRLDISTPISMQLDNWPNDXQTC 528
R+ ++GS++ RL I+ M L +P D Q C
Sbjct: 119 RIHHSGSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 26.6 bits (56), Expect = 0.28
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 427 RVSNNGSVSWIKRLDISTPISMQLDNWPNDXQTC 528
R+ ++GS++ RL I+ M L +P D Q C
Sbjct: 119 RIHHSGSITRSIRLTITASCPMNLQYFPMDRQLC 152
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 26.6 bits (56), Expect = 0.28
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 427 RVSNNGSVSWIKRLDISTPISMQLDNWPNDXQTC 528
R+ ++GS++ RL I+ M L +P D Q C
Sbjct: 58 RIHHSGSITRSIRLTITASCPMNLQYFPMDRQLC 91
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 26.2 bits (55), Expect = 0.37
Identities = 11/42 (26%), Positives = 21/42 (50%)
Frame = +1
Query: 445 SVSWIKRLDISTPISMQLDNWPNDXQTCTXXFGSRMHNSDEM 570
++ ++ +L + +M +P+D Q C S H +DEM
Sbjct: 150 TILYMVKLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEM 191
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 25.8 bits (54), Expect = 0.49
Identities = 8/39 (20%), Positives = 22/39 (56%)
Frame = +1
Query: 454 WIKRLDISTPISMQLDNWPNDXQTCTXXFGSRMHNSDEM 570
++ +L + +M+ +++P+D Q C+ S H + ++
Sbjct: 122 YMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDL 160
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 23.4 bits (48), Expect = 2.6
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = -1
Query: 788 AXXGXQNXDPPGNTXPAXRXXXPGASPGKH 699
A G N DPP R P A PG +
Sbjct: 15 AVFGNTNLDPPTRPTRLRREAKPEAEPGNN 44
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 23.4 bits (48), Expect = 2.6
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = -1
Query: 788 AXXGXQNXDPPGNTXPAXRXXXPGASPGKH 699
A G N DPP R P A PG +
Sbjct: 16 AVFGNTNLDPPTRPTRLRREAEPEAEPGNN 45
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 23.4 bits (48), Expect = 2.6
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = -1
Query: 788 AXXGXQNXDPPGNTXPAXRXXXPGASPGKH 699
A G N DPP R P A PG +
Sbjct: 16 AVFGNTNLDPPTRPARLRREAKPEAEPGNN 45
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 338 PSAAAPFPCVPTQS 297
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,814
Number of Sequences: 438
Number of extensions: 3909
Number of successful extensions: 87
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26702940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -