Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_FL5_M14
         (863 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for MG...    54   9e-07
AL731551-1|CAI40246.1| 3623|Homo sapiens cubilin (intrinsic fact...    30   9.5  
AL596445-1|CAH72450.1| 3623|Homo sapiens cubilin (intrinsic fact...    30   9.5  
AL365215-1|CAH73630.1| 3623|Homo sapiens cubilin (intrinsic fact...    30   9.5  
AF243129-1|AAK61830.1| 3494|Homo sapiens intrinsic factor-vitami...    30   9.5  
AF034611-1|AAC82612.1| 3623|Homo sapiens intrinsic factor-B12 re...    30   9.5  

>BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for
           MGC:134704) protein.
          Length = 44

 Score = 53.6 bits (123), Expect = 9e-07
 Identities = 22/25 (88%), Positives = 23/25 (92%)
 Frame = -1

Query: 713 KSNVAMNAWLPQASYPCGNFSGTSC 639
           KS+VAMNAW PQASYPCGNFS TSC
Sbjct: 11  KSDVAMNAWPPQASYPCGNFSDTSC 35


>AL731551-1|CAI40246.1| 3623|Homo sapiens cubilin (intrinsic
           factor-cobalamin receptor) protein.
          Length = 3623

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 719 FDVGSSYHCEXKFASVGLSPIKGN 790
           F++GSS HCE  +  +G S I G+
Sbjct: 861 FEIGSSAHCETDYVEIGSSSILGS 884


>AL596445-1|CAH72450.1| 3623|Homo sapiens cubilin (intrinsic
           factor-cobalamin receptor) protein.
          Length = 3623

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 719 FDVGSSYHCEXKFASVGLSPIKGN 790
           F++GSS HCE  +  +G S I G+
Sbjct: 861 FEIGSSAHCETDYVEIGSSSILGS 884


>AL365215-1|CAH73630.1| 3623|Homo sapiens cubilin (intrinsic
           factor-cobalamin receptor) protein.
          Length = 3623

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 719 FDVGSSYHCEXKFASVGLSPIKGN 790
           F++GSS HCE  +  +G S I G+
Sbjct: 861 FEIGSSAHCETDYVEIGSSSILGS 884


>AF243129-1|AAK61830.1| 3494|Homo sapiens intrinsic factor-vitamin
           B12 receptor protein.
          Length = 3494

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 719 FDVGSSYHCEXKFASVGLSPIKGN 790
           F++GSS HCE  +  +G S I G+
Sbjct: 732 FEIGSSAHCETDYVEIGSSSILGS 755


>AF034611-1|AAC82612.1| 3623|Homo sapiens intrinsic factor-B12
           receptor precursor protein.
          Length = 3623

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 719 FDVGSSYHCEXKFASVGLSPIKGN 790
           F++GSS HCE  +  +G S I G+
Sbjct: 861 FEIGSSAHCETDYVEIGSSSILGS 884


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,197,078
Number of Sequences: 237096
Number of extensions: 2752845
Number of successful extensions: 5843
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5840
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11039988564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)