Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_FL5_M07
(876 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends l... 31 1.6
AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP mot... 31 1.6
AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends p... 31 1.6
AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,... 31 1.6
AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,... 31 1.6
AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,... 31 1.6
BT003538-1|AAO39542.1| 995|Drosophila melanogaster RE07016p pro... 30 4.8
AE014134-2415|AAF53343.2| 995|Drosophila melanogaster CG31811-P... 30 4.8
AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation ... 29 8.4
AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA... 29 8.4
AE014134-2305|AAF53265.1| 166|Drosophila melanogaster CG15480-P... 29 8.4
>AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends long
isoform protein.
Length = 5554
Score = 31.5 bits (68), Expect = 1.6
Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Frame = +1
Query: 436 WTTADVTVEGV-NVLATPSSSRITIGGLALMHQATLPCDLGYINPIIKSPIPYTNHPRLN 612
W+ +V ++ V L TP +S+ + + QA P + P +S T P +
Sbjct: 4186 WSAKEVNIDSVIKKLDTPLASKDAKRAVEM--QAIAPAPIPNPQPGNQSMAQETALPTTS 4243
Query: 613 IHFHQSPERRTKRSSRRGLKPPLSSEAPSAYLTPSSLGMAKRGFAP 750
+ + S + T+ + PP P+ P G AKRG P
Sbjct: 4244 MSVNNSNDHDTEDETETRQLPPAKPPIPTVGRPPGRGGSAKRGRQP 4289
>AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP motif
protein long isoformprotein.
Length = 5533
Score = 31.5 bits (68), Expect = 1.6
Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Frame = +1
Query: 436 WTTADVTVEGV-NVLATPSSSRITIGGLALMHQATLPCDLGYINPIIKSPIPYTNHPRLN 612
W+ +V ++ V L TP +S+ + + QA P + P +S T P +
Sbjct: 4192 WSAKEVNIDSVIKKLDTPLASKDAKRAVEM--QAIAPAPIPNPQPGNQSMAQETALPTTS 4249
Query: 613 IHFHQSPERRTKRSSRRGLKPPLSSEAPSAYLTPSSLGMAKRGFAP 750
+ + S + T+ + PP P+ P G AKRG P
Sbjct: 4250 MSVNNSNDHDTEDETETRQLPPAKPPIPTVGRPPGRGGSAKRGRQP 4295
>AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends
protein.
Length = 5476
Score = 31.5 bits (68), Expect = 1.6
Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Frame = +1
Query: 436 WTTADVTVEGV-NVLATPSSSRITIGGLALMHQATLPCDLGYINPIIKSPIPYTNHPRLN 612
W+ +V ++ V L TP +S+ + + QA P + P +S T P +
Sbjct: 4135 WSAKEVNIDSVIKKLDTPLASKDAKRAVEM--QAIAPAPIPNPQPGNQSMAQETALPTTS 4192
Query: 613 IHFHQSPERRTKRSSRRGLKPPLSSEAPSAYLTPSSLGMAKRGFAP 750
+ + S + T+ + PP P+ P G AKRG P
Sbjct: 4193 MSVNNSNDHDTEDETETRQLPPAKPPIPTVGRPPGRGGSAKRGRQP 4238
>AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,
isoform C protein.
Length = 5476
Score = 31.5 bits (68), Expect = 1.6
Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Frame = +1
Query: 436 WTTADVTVEGV-NVLATPSSSRITIGGLALMHQATLPCDLGYINPIIKSPIPYTNHPRLN 612
W+ +V ++ V L TP +S+ + + QA P + P +S T P +
Sbjct: 4135 WSAKEVNIDSVIKKLDTPLASKDAKRAVEM--QAIAPAPIPNPQPGNQSMAQETALPTTS 4192
Query: 613 IHFHQSPERRTKRSSRRGLKPPLSSEAPSAYLTPSSLGMAKRGFAP 750
+ + S + T+ + PP P+ P G AKRG P
Sbjct: 4193 MSVNNSNDHDTEDETETRQLPPAKPPIPTVGRPPGRGGSAKRGRQP 4238
>AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,
isoform B protein.
Length = 5533
Score = 31.5 bits (68), Expect = 1.6
Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Frame = +1
Query: 436 WTTADVTVEGV-NVLATPSSSRITIGGLALMHQATLPCDLGYINPIIKSPIPYTNHPRLN 612
W+ +V ++ V L TP +S+ + + QA P + P +S T P +
Sbjct: 4192 WSAKEVNIDSVIKKLDTPLASKDAKRAVEM--QAIAPAPIPNPQPGNQSMAQETALPTTS 4249
Query: 613 IHFHQSPERRTKRSSRRGLKPPLSSEAPSAYLTPSSLGMAKRGFAP 750
+ + S + T+ + PP P+ P G AKRG P
Sbjct: 4250 MSVNNSNDHDTEDETETRQLPPAKPPIPTVGRPPGRGGSAKRGRQP 4295
>AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,
isoform A protein.
Length = 5560
Score = 31.5 bits (68), Expect = 1.6
Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Frame = +1
Query: 436 WTTADVTVEGV-NVLATPSSSRITIGGLALMHQATLPCDLGYINPIIKSPIPYTNHPRLN 612
W+ +V ++ V L TP +S+ + + QA P + P +S T P +
Sbjct: 4192 WSAKEVNIDSVIKKLDTPLASKDAKRAVEM--QAIAPAPIPNPQPGNQSMAQETALPTTS 4249
Query: 613 IHFHQSPERRTKRSSRRGLKPPLSSEAPSAYLTPSSLGMAKRGFAP 750
+ + S + T+ + PP P+ P G AKRG P
Sbjct: 4250 MSVNNSNDHDTEDETETRQLPPAKPPIPTVGRPPGRGGSAKRGRQP 4295
>BT003538-1|AAO39542.1| 995|Drosophila melanogaster RE07016p
protein.
Length = 995
Score = 29.9 bits (64), Expect = 4.8
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = +3
Query: 492 LSHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGVK 671
+S+Y+ S P+A SHP + +Q + + + P + H P+ + AP
Sbjct: 1 MSNYHPHSHPHALSHPHPQQVHNQLQNPHQNQLPPPQRHNHAAPTAAAS---ASGAPSSS 57
Query: 672 ASVVIRGSISVSHP 713
AS SI V+HP
Sbjct: 58 ASASASASILVAHP 71
>AE014134-2415|AAF53343.2| 995|Drosophila melanogaster CG31811-PB,
isoform B protein.
Length = 995
Score = 29.9 bits (64), Expect = 4.8
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = +3
Query: 492 LSHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGVK 671
+S+Y+ S P+A SHP + +Q + + + P + H P+ + AP
Sbjct: 1 MSNYHPHSHPHALSHPHPQQVHNQLQNPHQNQLPPPQRHNHAAPTAAAS---ASGAPSSS 57
Query: 672 ASVVIRGSISVSHP 713
AS SI V+HP
Sbjct: 58 ASASASASILVAHP 71
>AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation
initiation factoreIF4G protein.
Length = 1666
Score = 29.1 bits (62), Expect = 8.4
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 231 SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 356
S TF F PVL+ Y N+ Q C T + L+H PR
Sbjct: 1572 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1612
>AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA
protein.
Length = 1345
Score = 29.1 bits (62), Expect = 8.4
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 231 SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 356
S TF F PVL+ Y N+ Q C T + L+H PR
Sbjct: 1251 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1291
>AE014134-2305|AAF53265.1| 166|Drosophila melanogaster CG15480-PA
protein.
Length = 166
Score = 29.1 bits (62), Expect = 8.4
Identities = 25/97 (25%), Positives = 40/97 (41%)
Frame = +3
Query: 516 RPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGVKASVVIRGS 695
RPYA S R R + + ++ QP H P P T + + A+ V
Sbjct: 53 RPYALSENTPRKRRQETEREVQQMQEQPLYHHHSLPPTPPTTPPQHQQHPLPATQVPVTQ 112
Query: 696 ISVSHPLVTGHG*KGFRPLIFK*MMNXKLRALLXVIP 806
I V+H V H + + ++ K ++R LL + P
Sbjct: 113 IPVTHSPVFNH--QAYAYMLQKQRAVLQMRQLLNINP 147
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,370,082
Number of Sequences: 53049
Number of extensions: 846814
Number of successful extensions: 3083
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3082
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -