Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_FL5_M04
(842 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 67 2e-13
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 65 9e-13
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 64 2e-12
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 62 6e-12
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 61 1e-11
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 60 2e-11
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 60 3e-11
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 60 3e-11
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 58 8e-11
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 58 8e-11
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 57 2e-10
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 56 3e-10
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 56 5e-10
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 56 5e-10
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 55 7e-10
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 55 7e-10
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 54 2e-09
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 53 3e-09
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 53 4e-09
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 52 5e-09
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 50 4e-08
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 47 2e-07
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 46 3e-07
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 45 8e-07
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 42 7e-06
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 38 2e-04
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 37 2e-04
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 37 2e-04
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 37 2e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 33 0.003
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 31 0.018
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 28 0.12
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 27 0.16
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 2.7
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.1
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 67.3 bits (157), Expect = 2e-13
Identities = 50/159 (31%), Positives = 71/159 (44%), Gaps = 9/159 (5%)
Frame = +2
Query: 41 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 199
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 200 VRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 373
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 374 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 490
+ G V W + + + +P D QTC KFGS
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGS 165
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 64.9 bits (151), Expect = 9e-13
Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 12/184 (6%)
Frame = +2
Query: 59 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 217
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 218 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 391
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 392 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHK**RNGFRDGQKNIQYVR---VXS 562
V W + + ++ +P D QTC KFGS + +GF+ ++I +R V
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTY----DGFQVDLRHIDEIRGKNVVD 192
Query: 563 VGCD 574
+G D
Sbjct: 193 IGVD 196
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 63.7 bits (148), Expect = 2e-12
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 7/149 (4%)
Frame = +2
Query: 65 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 232
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 233 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 403
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 404 KRLDISTPISMQLDNWPNDMQTCTFKFGS 490
RL I M L+N+P D Q C +FGS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 62.1 bits (144), Expect = 6e-12
Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 7/169 (4%)
Frame = +2
Query: 5 GLFLLPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHAN 178
G L + L+ + A N + L D LL+ Y++ P ++ V+ + + L+ +
Sbjct: 6 GETLRVWFLSALVVHGAVAGNPDAKRLY-DDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQ 64
Query: 179 IRESESTVRILAD---LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-AT 343
+ + +I+ ++ +W D +L W E+G L V S+ +WRPD+VL N A
Sbjct: 65 LIDVNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGN 124
Query: 344 TAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 490
A +A + + G V W + + ++ +P D QTC KFGS
Sbjct: 125 FEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGS 173
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 61.3 bits (142), Expect = 1e-11
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 12/166 (7%)
Frame = +2
Query: 29 LTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRE 187
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 188 SESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL 364
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEV 119
Query: 365 ----RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 490
+A + + G V W + + ++ +P D QTC KFGS
Sbjct: 120 TIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGS 165
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 60.5 bits (140), Expect = 2e-11
Identities = 44/145 (30%), Positives = 69/145 (47%), Gaps = 10/145 (6%)
Frame = +2
Query: 86 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 250
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 251 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 415
WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPPAI 153
Query: 416 ISTPISMQLDNWPNDMQTCTFKFGS 490
+ + ++ +P D Q+C KFGS
Sbjct: 154 YKSSCEINVEYFPFDEQSCIMKFGS 178
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 59.7 bits (138), Expect = 3e-11
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Frame = +2
Query: 137 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 310
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 311 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 478
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 479 KFGS 490
KFGS
Sbjct: 168 KFGS 171
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 59.7 bits (138), Expect = 3e-11
Identities = 47/172 (27%), Positives = 83/172 (48%), Gaps = 10/172 (5%)
Frame = +2
Query: 5 GLFLLPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHAN 178
G L + L+ + A N + L D LL+ Y++ P ++ V+ + + L+ +
Sbjct: 6 GETLRVWFLSALVVHGAVAGNPDAKRLY-DDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQ 64
Query: 179 IRESESTVRILAD---LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATT 346
+ + +I+ ++ +W D +L W E+G L V S+ +WRPD+VL N A
Sbjct: 65 LIDVNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNAD-- 122
Query: 347 AGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 490
G+Y + +A V +G V W + S+ ++ +P D+QTC K GS
Sbjct: 123 -GNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVLKLGS 173
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 58.4 bits (135), Expect = 8e-11
Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 7/142 (4%)
Frame = +2
Query: 86 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 250
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 251 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIST 424
WN E+ G ++ +LW+PD+++ N+A G Y V++NGS ++ +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 425 PISMQLDNWPNDMQTCTFKFGS 490
+ + +P D Q C KFGS
Sbjct: 178 TCKIDITWFPFDDQHCDMKFGS 199
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 58.4 bits (135), Expect = 8e-11
Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 7/142 (4%)
Frame = +2
Query: 86 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 250
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 251 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIST 424
WN E+ G ++ +LW+PD+++ N+A G Y V++NGS ++ +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 425 PISMQLDNWPNDMQTCTFKFGS 490
+ + +P D Q C KFGS
Sbjct: 178 TCKIDITWFPFDDQHCDMKFGS 199
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 57.6 bits (133), Expect = 1e-10
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +2
Query: 176 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 349
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 350 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 490
G Y V++NGS ++ + + + +P D Q C KFGS
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 131
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 56.8 bits (131), Expect = 2e-10
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +2
Query: 176 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 349
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 350 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 490
G Y V+++GS ++ + M + +P D Q C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGS 131
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 56.4 bits (130), Expect = 3e-10
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +2
Query: 176 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 349
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 350 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 490
G Y V+++GS ++ + M + +P D Q C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGS 131
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 55.6 bits (128), Expect = 5e-10
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +2
Query: 176 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 349
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 350 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 490
G Y V+++GS ++ + + + +P D Q C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 131
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 55.6 bits (128), Expect = 5e-10
Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 7/158 (4%)
Frame = +2
Query: 38 AIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NIRESESTV 202
A+A++ + +++ LL TY+ E P ++ +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 203 RILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARV 376
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 377 SNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 490
NNG+ ++ + + + +P D Q C KFGS
Sbjct: 131 KNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGS 168
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 55.2 bits (127), Expect = 7e-10
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +2
Query: 176 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 349
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 350 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 490
G Y V+++GS ++ + + + +P D Q C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGS 131
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 55.2 bits (127), Expect = 7e-10
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +2
Query: 176 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 349
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 350 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 490
G Y V+++GS ++ + + + +P D Q C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGS 131
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 53.6 bits (123), Expect = 2e-09
Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 8/154 (5%)
Frame = +2
Query: 62 ENATSLSLMIDSLLATYDRESPPDS--KIVVNLTLHL--RHANIRESESTVRILADLQMN 229
++ T+L + L YD P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 230 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 397
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 398 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMH 499
+ + + +WP D C FGS +H
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVH 192
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 53.2 bits (122), Expect = 3e-09
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 3/120 (2%)
Frame = +2
Query: 140 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 316
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 317 VVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 490
+L N A + V S+ G V W+ + + ++ +P D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 52.8 bits (121), Expect = 4e-09
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 10/157 (6%)
Frame = +2
Query: 59 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 223
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 224 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 394
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 395 SWIKRLDISTPISMQLDN--WPNDMQTCTFKFGSRMH 499
+ TP+ + D+ WP D+ CT S H
Sbjct: 148 LCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIASWSH 182
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 52.4 bits (120), Expect = 5e-09
Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 8/147 (5%)
Frame = +2
Query: 74 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 238
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 239 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 409
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 410 LDISTPISMQLDNWPNDMQTCTFKFGS 490
L I M+L N+P D Q+C GS
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 49.6 bits (113), Expect = 4e-08
Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 12/173 (6%)
Frame = +2
Query: 8 LFLLPFLLTCAIASAAECENATSLSLMIDSLLATYDR------ESPPDSKIVVNLTLHLR 169
L LL FLL + + + ++D++L YD E+ D +V + L +R
Sbjct: 9 LVLLTFLLHPSRCTQGKVNYREKEKEVLDNILGGYDARIRPSGENATDGPAIVRVNLFVR 68
Query: 170 H-ANIRESESTVRILADLQMNWIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAA 340
A I + + + + W+D+RL +N G T L + R+W PD+ N
Sbjct: 69 SIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKE 127
Query: 341 TTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 490
+ + R+ NGSV + R+ ++ M L +P D Q C+ + S
Sbjct: 128 GHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMAS 180
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 46.8 bits (106), Expect = 2e-07
Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 12/173 (6%)
Frame = +2
Query: 8 LFLLPFLLTCAIASAAECENATSLSLMIDSLLATYDR------ESPPDSKIVVNLTLHLR 169
L LL FLL + + + ++D++L YD E+ D VV + + +R
Sbjct: 9 LVLLTFLLHPSRCTQGKVNYREKEKEVLDNILGGYDARIRPSGENATDGPAVVRVNIFVR 68
Query: 170 H-ANIRESESTVRILADLQMNWIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAA 340
+ I + + + W+D+RL +N G T L + R+W PD+ N
Sbjct: 69 SISKIDDVTMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKE 127
Query: 341 TTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 490
+ + R+ NGSV + R+ ++ M L +P D Q C+ + S
Sbjct: 128 GHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMAS 180
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 46.4 bits (105), Expect = 3e-07
Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 13/155 (8%)
Frame = +2
Query: 65 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 232
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 233 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 385
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 386 GSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 490
GS++ RL I+ M L +P D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 45.2 bits (102), Expect = 8e-07
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 13/155 (8%)
Frame = +2
Query: 65 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 232
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 233 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 385
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 386 GSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 490
GS++ RL I+ M L +P D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 41.9 bits (94), Expect = 7e-06
Identities = 38/168 (22%), Positives = 71/168 (42%), Gaps = 7/168 (4%)
Frame = +2
Query: 8 LFLLPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN 178
L ++ + ++ + + +++ I +L YD P+ ++V + L + +
Sbjct: 14 LQMIHLIAWASLENTGISDRLENVTQTISRILDGYDIRLRPNFGGEPLLVGMDLTIASFD 73
Query: 179 -IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGD 355
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 74 AISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHD 133
Query: 356 YALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 490
R R+S +GSV++ R + M L +P D Q CT + S
Sbjct: 134 VTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.5 bits (83), Expect = 2e-04
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +2
Query: 230 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 382
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 383 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 490
+GS++ RL I+ M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 37.1 bits (82), Expect = 2e-04
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 10/173 (5%)
Frame = +2
Query: 2 TGLFLLPFLLTCAIASAAE--CENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-L 160
T L +L LT AE E+ S ++D+LL + YD+ P + VN++ L
Sbjct: 34 TILCILTLALTLVTLVRAEDIFEDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVL 93
Query: 161 HLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLN 331
L A+ ES + LQ W D RL + N ++ + + +W PD ++
Sbjct: 94 LLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHG 153
Query: 332 AAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 490
R+ NG+V+++ R + +L+ +P D C+F S
Sbjct: 154 DFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 37.1 bits (82), Expect = 2e-04
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 10/173 (5%)
Frame = +2
Query: 2 TGLFLLPFLLTCAIASAAE--CENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-L 160
T L +L LT AE E+ S ++D+LL + YD+ P + VN++ L
Sbjct: 34 TILCILTLALTLVTLVRAEDIFEDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVL 93
Query: 161 HLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLN 331
L A+ ES + LQ W D RL + N ++ + + +W PD ++
Sbjct: 94 LLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHG 153
Query: 332 AAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 490
R+ NG+V+++ R + +L+ +P D C+F S
Sbjct: 154 DFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 37.1 bits (82), Expect = 2e-04
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 10/173 (5%)
Frame = +2
Query: 2 TGLFLLPFLLTCAIASAAE--CENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-L 160
T L +L LT AE E+ S ++D+LL + YD+ P + VN++ L
Sbjct: 34 TILCILTLALTLVTLVRAEDIFEDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVL 93
Query: 161 HLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLN 331
L A+ ES + LQ W D RL + N ++ + + +W PD ++
Sbjct: 94 LLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHG 153
Query: 332 AAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 490
R+ NG+V+++ R + +L+ +P D C+F S
Sbjct: 154 DFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 33.1 bits (72), Expect = 0.003
Identities = 34/157 (21%), Positives = 68/157 (43%), Gaps = 11/157 (7%)
Frame = +2
Query: 62 ENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRE----SESTVRILAD--LQ 223
E++ SL ++ YD+ P K + T+ H + +E ++ +AD L
Sbjct: 1 ESSLSLKDILPLNPKLYDKHRAP--KFLGQPTIVYFHVTVLSIDSINEESMTYVADIFLA 58
Query: 224 MNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALRAR---VSNNG 388
+W D RL N E + +WRPD NA T + ++ + ++
Sbjct: 59 QSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDK 118
Query: 389 SVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMH 499
++ ++ +L + +M+ +++P+D Q C+ S H
Sbjct: 119 TLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSH 155
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 30.7 bits (66), Expect = 0.018
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 4/121 (3%)
Frame = +2
Query: 140 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 313
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 314 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 487
D ++ R+ NG+V+++ R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 488 S 490
S
Sbjct: 257 S 257
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 27.9 bits (59), Expect = 0.12
Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 11/122 (9%)
Frame = +2
Query: 140 IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 301
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 302 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPNDMQ 466
LW+PD LNA + AL + S+ N +V + R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 467 TC 472
C
Sbjct: 129 IC 130
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 27.5 bits (58), Expect = 0.16
Identities = 15/71 (21%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +2
Query: 296 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 466
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 467 TCTFKFGSRMH 499
C + S H
Sbjct: 176 ECKLQMESLSH 186
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 23.4 bits (48), Expect = 2.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 452 PNDMQTCTFKFGSRMHK**RNGFRDGQKNIQYVR 553
P D++ FK+G H RN ++ KN++Y R
Sbjct: 655 PQDIENI-FKYGYVSHANQRNMYKLDLKNMKYTR 687
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 283 PSAAAPFPCVPTQS 242
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,706
Number of Sequences: 438
Number of extensions: 4553
Number of successful extensions: 89
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27067071
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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