Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_FL5_L09
(846 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 75 6e-14
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 66 4e-11
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 60 2e-09
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 52 5e-07
AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical ... 44 2e-04
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 74.9 bits (176), Expect = 6e-14
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 2/208 (0%)
Frame = +2
Query: 95 TAGVPQGSALSPLLFSLYINDIPRSPETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVA 268
T GVPQG+ LSPLLF +Y+NDI +A FADDT +Y S K LQ A+
Sbjct: 74 TCGVPQGAVLSPLLFGIYVNDISSILPEKVACKQFADDTKLYASTPKTE-SENNLQSALD 132
Query: 269 TLGQWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWV 448
+ W + ++ +N +K T + + RR + L G PI
Sbjct: 133 AVVDWTKGSKLTLNQSK--------------TVHVTVGKRRIDFK----YHLDGYPIERK 174
Query: 449 SKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKTCIRPV 628
+ + LG + + F H + + A F L ++ + +K + + LYKT IRP
Sbjct: 175 AITRDLGFLISEKLDFSDHWRKCINLAKFQLANMFNKYSTSNK---KLMILLYKTFIRPR 231
Query: 629 MTYASVVFAHAARTNLKSLQVIQSRFCR 712
+ Y +VV + +++ K+++ +Q+ F R
Sbjct: 232 LEYGTVVSSPTKKSDEKTIESVQNAFTR 259
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 65.7 bits (153), Expect = 4e-11
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 3/218 (1%)
Frame = +2
Query: 11 SCSSYETSCRTVRFDIE*RELVLV-PXQLTAGVPQGSALSPLLFSLYIND--IPRSPETH 181
+CS Y+ F ++ + V +++GVPQGS PLLF L+IN+ I +P +
Sbjct: 849 TCSWYKEFLENRTFSVKINKFVSKNSYPISSGVPQGSVSGPLLFILFINNLLIDLAPTIN 908
Query: 182 LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAAVLFKRGRPPNI 361
++ FADD I+++ +++ + I V+ W + + + PTKSA
Sbjct: 909 ISCFADDVKIFHT--DPTIIQNSIDIIVS----WSKLNELPLAPTKSAL----------- 951
Query: 362 TSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFIL 541
+ L +R N S ++ G PI S V+ LG+ D + F HI V + +
Sbjct: 952 ---LALGTRNKNQS----YSVDGVPITPSSTVRDLGLITDCKLKFEHHIVKV---SCLAM 1001
Query: 542 GRLYPMLCSRSKLSLRNKVTLYKTCIRPVMTYASVVFA 655
R +L + S S + LYKT + P+M Y S V+A
Sbjct: 1002 LRSKQILKAFSSNSPKFYAHLYKTYVAPIMNYCSEVYA 1039
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 60.1 bits (139), Expect = 2e-09
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 3/214 (1%)
Frame = +2
Query: 92 LTAGVPQGSALSPLLFSLYINDIPRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVAT 271
L GVPQGS +SP LF+ Y+ D+P +T L +ADD +I +K+ ++Q+ +
Sbjct: 529 LLGGVPQGSVISPNLFTFYLKDMPTQQDTMLISYADDMSIIARDKKIEKAAEKVQLHIDE 588
Query: 272 LGQWFRKWRIDINPTKSAAVLFKRGRPPNITSSIPLRSRRANTSAVSPITLFGQPIPWVS 451
+ ++ ++ + I+ KS +F S P + I PIP ++
Sbjct: 589 IAKYLKERGMSISAEKSTVTVF---------SCDPKEHK-----TKPDIYWMDDPIPVIN 634
Query: 452 KVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVTLYKT--CIRP 625
K LG+TL+ + H+ ++ R+ + S + R + LY T I+P
Sbjct: 635 APKLLGITLNTMTGTKDHVGNA-IKSMQNKTRVIKSMAGTSWGNDR-ETMLYTTQALIKP 692
Query: 626 VMTYASVVFAH-AARTNLKSLQVIQSRFCRIAVG 724
Y + + + TNL+ L++ R VG
Sbjct: 693 TALYGAPAWTSLLSDTNLEKLEIAYRSALRACVG 726
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 52.0 bits (119), Expect = 5e-07
Identities = 59/226 (26%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Frame = +2
Query: 92 LTAGVPQGSALSPLLFSLYINDIPRS--PETHLALFADDTAIYYSCRKMSLLHRRLQIAV 265
+++GVP+GS P LF ++IN + S P + FADD +Y + +Q +
Sbjct: 53 ISSGVPKGSVSGPFLFLIFINSLLLSVPPSISCSAFADDLKVYSHSPPL------IQTTI 106
Query: 266 ATLGQWFRKWRIDINPTKSAAVLFKRGRPPN-------ITSSIPLRSRRANTSAVS---- 412
+ W ++ + K AA+L K G N + +S+ R A+ + VS
Sbjct: 107 DLITTWSENNKLPLAVHK-AALLNKLGFSSNCVLLLAPLINSLVCRLLAASRTGVSTVAH 165
Query: 413 ------------PITLF---GQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGR 547
P T++ PI + + LG+ D +TF+PHIK + + L R
Sbjct: 166 SKTCLLHLGKKNPKTVYKINNLPISPSNIARDLGILTDSKLTFKPHIKKI---VSLALLR 222
Query: 548 LYPMLCSRSKLSLRNKVTLYKTCIRPVMTYASVVFAHAARTNLKSL 685
+L S L L+KT I P++ Y S V++ ++L +L
Sbjct: 223 CKQLLKSFKSLCPEFYCNLFKTYILPLIEYGSAVYSPKPSSSLSTL 268
>AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical
protein K09H9.4 protein.
Length = 328
Score = 43.6 bits (98), Expect = 2e-04
Identities = 27/97 (27%), Positives = 49/97 (50%)
Frame = +2
Query: 422 LFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCSRSKLSLRNKVT 601
L G PI + + LG + + F H K + A F L ++ + +K + +
Sbjct: 136 LDGYPIERKTITRDLGFLISEKLDFSEHWKKSINLAKFQLANIFNQYSTSNKKLM---IL 192
Query: 602 LYKTCIRPVMTYASVVFAHAARTNLKSLQVIQSRFCR 712
LYKT IRP + Y +VV + +++ K+++ +Q+ F R
Sbjct: 193 LYKTFIRPRLEYGTVVSSPTKKSDEKAIESVQNAFTR 229
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,936,966
Number of Sequences: 27780
Number of extensions: 428498
Number of successful extensions: 1023
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1023
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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