Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_FL5_L08
(850 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 64 2e-12
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 61 1e-11
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 61 1e-11
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 61 1e-11
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 60 3e-11
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 60 3e-11
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 60 3e-11
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 60 3e-11
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 60 3e-11
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 59 4e-11
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 59 4e-11
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 59 6e-11
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 58 8e-11
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 58 8e-11
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 58 1e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 55 1e-09
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 53 3e-09
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 51 2e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 48 1e-07
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 42 7e-06
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 42 7e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 40 3e-05
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 38 1e-04
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 38 2e-04
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 38 2e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 38 2e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 37 3e-04
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 36 5e-04
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 31 0.013
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 28 0.12
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 27 0.22
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 27 0.22
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 27 0.22
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 27 0.22
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 22 8.2
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.2
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 63.7 bits (148), Expect = 2e-12
Identities = 35/127 (27%), Positives = 64/127 (50%), Gaps = 10/127 (7%)
Frame = +3
Query: 252 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSV 416
W D +L W+ ++G + +++W+PD+VL N A G+Y +R + + NG V
Sbjct: 83 WTDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNAD---GNYEVRYKSNVLIYPNGDV 139
Query: 417 SWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI--DKRIYSM---FXSG 581
W+ + ++ + +P D QTC KFGS N D++ + +K + + SG
Sbjct: 140 LWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSG 199
Query: 582 AWDVTDL 602
WD+ ++
Sbjct: 200 TWDIINV 206
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 61.3 bits (142), Expect = 1e-11
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Frame = +3
Query: 249 DWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSW 422
+W+D L WN E+G L ++ +LW+PD+++ N+A G Y V++NGS +
Sbjct: 110 EWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLY 169
Query: 423 IKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 548
+ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 170 VPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 61.3 bits (142), Expect = 1e-11
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Frame = +3
Query: 249 DWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSW 422
+W+D L WN E+G L ++ +LW+PD+++ N+A G Y V++NGS +
Sbjct: 110 EWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLY 169
Query: 423 IKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 548
+ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 170 VPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 60.9 bits (141), Expect = 1e-11
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Frame = +3
Query: 249 DWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSW 422
+W+D L WN E+G L ++ +LW+PD+++ N+A G Y V++NGS +
Sbjct: 42 EWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLY 101
Query: 423 IKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 548
+ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 102 VPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 60.1 bits (139), Expect = 3e-11
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Frame = +3
Query: 249 DWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSW 422
+W+D L WN E+G L ++ +LW+PD+++ N+A G Y V+++GS +
Sbjct: 42 EWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLY 101
Query: 423 IKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 548
+ + M + +P D Q C KFGS ++ +++D V+
Sbjct: 102 VPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 60.1 bits (139), Expect = 3e-11
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Frame = +3
Query: 252 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 419
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 420 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDKRIYSM 569
+ + + +WP D C FGS +H+ +E++ +DK+ + M
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 60.1 bits (139), Expect = 3e-11
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Frame = +3
Query: 252 WIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 425
W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G V W
Sbjct: 81 WYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWK 140
Query: 426 KRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 539
+ + ++ +P D QTC KFGS ++ ++D
Sbjct: 141 PPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 60.1 bits (139), Expect = 3e-11
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Frame = +3
Query: 252 WIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSV 416
W D +L WN E+G L V SE +W PD+VL N A G+Y + +A + G V
Sbjct: 90 WNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDV 146
Query: 417 SWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 539
SW + + ++ +P D Q+C KFGS +N ++D
Sbjct: 147 SWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 59.7 bits (138), Expect = 3e-11
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Frame = +3
Query: 249 DWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSW 422
+W+D L WN E+G L ++ +LW+PD+++ N+A G Y V+++GS +
Sbjct: 42 EWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLY 101
Query: 423 IKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 548
+ + M + +P D Q C KFGS ++ +++D V+
Sbjct: 102 VPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 59.3 bits (137), Expect = 4e-11
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Frame = +3
Query: 252 WIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 425
W D +L W E+G L V S+ +WRPD+VL N A A +A + + G V W
Sbjct: 85 WYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWK 144
Query: 426 KRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 539
+ + ++ +P D QTC KFGS ++ ++D
Sbjct: 145 PPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 59.3 bits (137), Expect = 4e-11
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 6/121 (4%)
Frame = +3
Query: 249 DWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSW 422
+W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+ +
Sbjct: 79 EWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLY 138
Query: 423 IKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDKR----IYSMFXSGAWD 590
+ + + + +P D Q C KFGS ++ ++D + I S +G WD
Sbjct: 139 VPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNGEWD 198
Query: 591 V 593
+
Sbjct: 199 L 199
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 58.8 bits (136), Expect = 6e-11
Identities = 29/102 (28%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Frame = +3
Query: 249 DWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSW 422
+W+D L WN E+G L ++ +LW+PD+++ N+A G Y V+++GS +
Sbjct: 42 EWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLY 101
Query: 423 IKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 548
+ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 102 VPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 58.4 bits (135), Expect = 8e-11
Identities = 29/102 (28%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Frame = +3
Query: 249 DWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSW 422
+W+D L WN E+G L ++ +LW+PD+++ N+A G Y V+++GS +
Sbjct: 42 EWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLY 101
Query: 423 IKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 548
+ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 102 VPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 58.4 bits (135), Expect = 8e-11
Identities = 29/102 (28%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Frame = +3
Query: 249 DWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSW 422
+W+D L WN E+G L ++ +LW+PD+++ N+A G Y V+++GS +
Sbjct: 42 EWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLY 101
Query: 423 IKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 548
+ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 102 VPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 58.0 bits (134), Expect = 1e-10
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Frame = +3
Query: 246 NDWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVS 419
++W D + W+ E+G T L V SE +W PD+VL N A G + +A + G V
Sbjct: 75 HEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVL 134
Query: 420 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 539
W + + + +P D QTC KFGS ++ ++D
Sbjct: 135 WTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQID 174
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 56.8 bits (131), Expect = 2e-10
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Frame = +3
Query: 252 WIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSV 416
W D +L W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V
Sbjct: 85 WYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYYSGLV 141
Query: 417 SWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 539
W + S+ ++ +P D+QTC K GS ++ ++D
Sbjct: 142 VWQPPAVYKSSCSIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 54.8 bits (126), Expect = 1e-09
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Frame = +3
Query: 249 DWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGS 413
+W D +L WN ++G T V SE +W PD+VL N A G+Y + +A + + G
Sbjct: 76 EWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGK 132
Query: 414 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 539
V W + + ++ +P D QTC KFGS ++ +D
Sbjct: 133 VVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 53.2 bits (122), Expect = 3e-09
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 9/143 (6%)
Frame = +3
Query: 138 SGVSPRLQNRSQP-DPAFETC*HS*VRVHRADTGRSSNDWI-----DKRLSWNAGEW-GC 296
+GV P +N SQP F H + V + ++N W+ D L WNA E+ G
Sbjct: 19 AGVRPA-ENSSQPLAVVFGLSLHHIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGI 77
Query: 297 STWLVSSERLWRPDVVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDISTPISMQLDN 470
V R+WRPD +L N A + V S+ G V W+ + + ++
Sbjct: 78 RVIRVPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEF 137
Query: 471 WPNDMQTCTFKFGSRMHNSDEMD 539
+P D Q C K+ S ++ +++
Sbjct: 138 FPFDEQRCVLKWASWTYDGYQLE 160
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 50.8 bits (116), Expect = 2e-08
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Frame = +3
Query: 252 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSW 422
W+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 61 WVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLY 120
Query: 423 IKRLDISTPISMQLDNWPNDMQTCTFKFGS 512
RL I M L+N+P D Q C +FGS
Sbjct: 121 SSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 47.6 bits (108), Expect = 1e-07
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Frame = +3
Query: 252 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSW 422
W D RLS+ S + ER+WRPD N + + R+S +G + +
Sbjct: 93 WRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILY 152
Query: 423 IKRLDISTPISMQLDNWPNDMQTCTFKFGS 512
RL I M+L N+P D Q+C GS
Sbjct: 153 SMRLTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 41.9 bits (94), Expect = 7e-06
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Frame = +3
Query: 252 WIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSV 416
W+D+RL +N G T L + R+W PD+ N + + R+ NGSV
Sbjct: 90 WLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSV 148
Query: 417 SWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 545
+ R+ ++ M L +P D Q C+ + S +D++ F+
Sbjct: 149 LYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 41.9 bits (94), Expect = 7e-06
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Frame = +3
Query: 252 WIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSV 416
W+D+RL +N G T L + R+W PD+ N + + R+ NGSV
Sbjct: 90 WLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSV 148
Query: 417 SWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 545
+ R+ ++ M L +P D Q C+ + S +D++ F+
Sbjct: 149 LYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 39.9 bits (89), Expect = 3e-05
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Frame = +3
Query: 252 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSW 422
W D+RL+++ E + +E++W PD N + D R R+S +GSV++
Sbjct: 92 WKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTY 151
Query: 423 IKRLDISTPISMQLDNWPNDMQTCTFKFGS 512
R + M L +P D Q CT + S
Sbjct: 152 GMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 37.9 bits (84), Expect = 1e-04
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Frame = +3
Query: 252 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAGDY---ALRARVSNNGSVS 419
W L+W + E+ ++ V S +W PD+V+ ++ + D ++ V N+G++
Sbjct: 90 WEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM-HSVTSVGIDLEMPSVECIVFNSGTIL 148
Query: 420 WIKRLDISTPISMQLDN--WPNDMQTCTFKFGSRMHNSDEM 536
+ TP+ + D+ WP D+ CT S H S+E+
Sbjct: 149 CVP-FTTYTPVC-EYDHTWWPYDILNCTIHIASWSHGSNEI 187
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.5 bits (83), Expect = 2e-04
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +3
Query: 252 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 404
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 405 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 512
+GS++ RL I+ M L +P D Q C + S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.5 bits (83), Expect = 2e-04
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +3
Query: 252 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 404
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 405 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 512
+GS++ RL I+ M L +P D Q C + S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.5 bits (83), Expect = 2e-04
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +3
Query: 252 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 404
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 405 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 512
+GS++ RL I+ M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 36.7 bits (81), Expect = 3e-04
Identities = 16/77 (20%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +3
Query: 324 LWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 494
+WRPD NA T + ++ + ++ ++ ++ +L + +M+ +++P+D Q C
Sbjct: 87 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQIC 146
Query: 495 TFKFGSRMHNSDEMDFV 545
+ S H + ++ F+
Sbjct: 147 SMMIESLSHTTQDLVFI 163
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 35.9 bits (79), Expect = 5e-04
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +3
Query: 318 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 488
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 489 TCTFKFGSRMHNSDEMDFVID 551
C + S H +DEM F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 31.1 bits (67), Expect = 0.013
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +3
Query: 324 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 494
+W P V + N ++A T + + + +G V RL + ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 495 TFKFGSRMHNSDEM 536
F S HN +M
Sbjct: 157 PLIFESWTHNVLDM 170
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 27.9 bits (59), Expect = 0.12
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Frame = +3
Query: 318 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPND 482
+ LW+PD LNA + AL + S+ N +V + R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 483 MQTCTFKFGSRMHNSDEM 536
+Q C S ++ ++
Sbjct: 127 IQICPIYIESFSYHKQKL 144
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 27.1 bits (57), Expect = 0.22
Identities = 20/101 (19%), Positives = 41/101 (40%), Gaps = 3/101 (2%)
Frame = +3
Query: 252 WIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSW 422
W D RL + N ++ + + +W PD ++ R+ NG+V++
Sbjct: 117 WYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNY 176
Query: 423 IKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 545
+ R + +L+ +P D C+F S + + +V
Sbjct: 177 LMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 27.1 bits (57), Expect = 0.22
Identities = 20/101 (19%), Positives = 41/101 (40%), Gaps = 3/101 (2%)
Frame = +3
Query: 252 WIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSW 422
W D RL + N ++ + + +W PD ++ R+ NG+V++
Sbjct: 117 WYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNY 176
Query: 423 IKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 545
+ R + +L+ +P D C+F S + + +V
Sbjct: 177 LMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 27.1 bits (57), Expect = 0.22
Identities = 20/101 (19%), Positives = 41/101 (40%), Gaps = 3/101 (2%)
Frame = +3
Query: 252 WIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSW 422
W D RL + N ++ + + +W PD ++ R+ NG+V++
Sbjct: 168 WYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNY 227
Query: 423 IKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 545
+ R + +L+ +P D C+F S + + +V
Sbjct: 228 LMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 268
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 27.1 bits (57), Expect = 0.22
Identities = 20/101 (19%), Positives = 41/101 (40%), Gaps = 3/101 (2%)
Frame = +3
Query: 252 WIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSW 422
W D RL + N ++ + + +W PD ++ R+ NG+V++
Sbjct: 117 WYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNY 176
Query: 423 IKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 545
+ R + +L+ +P D C+F S + + +V
Sbjct: 177 LMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.8 bits (44), Expect = 8.2
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +1
Query: 601 CPVRCXXRTVARWXLAWQCS 660
C VRC + RW W+ S
Sbjct: 19 CSVRCSAASGLRWFEIWRDS 38
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.2
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 305 PSAAAPFPCVPTQS 264
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,841
Number of Sequences: 438
Number of extensions: 4347
Number of successful extensions: 81
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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