Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_FL5_L07
(825 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 247 6e-66
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 239 1e-63
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 236 2e-62
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 236 2e-62
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 232 2e-61
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 231 5e-61
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 167 6e-42
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 167 6e-42
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 121 7e-28
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 121 7e-28
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 120 2e-27
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 119 3e-27
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 119 3e-27
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 115 4e-26
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 114 6e-26
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 114 6e-26
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 113 1e-25
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 112 3e-25
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 112 3e-25
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 112 3e-25
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 112 3e-25
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 110 1e-24
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 107 1e-23
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 91 9e-19
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 91 9e-19
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 90 2e-18
Z82074-1|CAB04928.2| 480|Caenorhabditis elegans Hypothetical pr... 30 2.3
AL132864-6|CAB63395.1| 480|Caenorhabditis elegans Hypothetical ... 30 2.3
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 28 9.3
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 247 bits (605), Expect = 6e-66
Identities = 110/116 (94%), Positives = 115/116 (99%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 273
MREIVHIQAGQCGNQIGAKFWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEASGGKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 274 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 441
PRA LVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+V
Sbjct: 61 PRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNV 116
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 441 LXVVRKEAESCDC 479
L VVRKEAESCDC
Sbjct: 117 LDVVRKEAESCDC 129
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +2
Query: 482 QGFN*HTRSAGAPVPVXAXLLISKIRKXYPDRII 583
QGF G LLISKIR+ YPDRI+
Sbjct: 131 QGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIM 164
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 239 bits (586), Expect = 1e-63
Identities = 105/116 (90%), Positives = 112/116 (96%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 273
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 274 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 441
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+V
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNV 116
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +2
Query: 482 QGFN*HTRSAGAPVPVXAXLLISKIRKXYPDRII 583
QGF G LLISKIR+ YPDRI+
Sbjct: 131 QGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 164
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +3
Query: 441 LXVVRKEAESCDC 479
L VVRKEAE CDC
Sbjct: 117 LDVVRKEAEGCDC 129
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 236 bits (577), Expect = 2e-62
Identities = 104/116 (89%), Positives = 111/116 (95%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 273
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 274 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 441
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+V
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNV 116
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +2
Query: 482 QGFN*HTRSAGAPVPVXAXLLISKIRKXYPDRII 583
QGF G LLISKIR+ YPDRI+
Sbjct: 131 QGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 164
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 236 bits (577), Expect = 2e-62
Identities = 104/116 (89%), Positives = 111/116 (95%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 273
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 274 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 441
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+V
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNV 116
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +2
Query: 482 QGFN*HTRSAGAPVPVXAXLLISKIRKXYPDRII 583
QGF G LLISKIR+ YPDRI+
Sbjct: 131 QGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 164
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 232 bits (568), Expect = 2e-61
Identities = 101/116 (87%), Positives = 111/116 (95%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 273
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 274 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 441
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+V
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNV 116
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 231 bits (565), Expect = 5e-61
Identities = 100/116 (86%), Positives = 111/116 (95%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 273
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 274 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 441
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+V
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNV 116
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +2
Query: 482 QGFN*HTRSAGAPVPVXAXLLISKIRKXYPDRII 583
QGF G LLISKIR+ YPDRI+
Sbjct: 131 QGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 164
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 167 bits (407), Expect = 6e-42
Identities = 72/123 (58%), Positives = 95/123 (77%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 273
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 274 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVXTSF 453
PRAILVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD V +
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 454 ERK 462
R+
Sbjct: 121 RRE 123
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 167 bits (407), Expect = 6e-42
Identities = 72/123 (58%), Positives = 95/123 (77%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 273
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 274 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVXTSF 453
PRAILVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD V +
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 454 ERK 462
R+
Sbjct: 121 RRE 123
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 121 bits (291), Expect = 7e-28
Identities = 51/122 (41%), Positives = 73/122 (59%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 273
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 274 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVXTSF 453
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+V
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 454 ER 459
R
Sbjct: 121 RR 122
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 121 bits (291), Expect = 7e-28
Identities = 51/122 (41%), Positives = 73/122 (59%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 273
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 274 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVXTSF 453
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+V
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 454 ER 459
R
Sbjct: 121 RR 122
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 120 bits (288), Expect = 2e-27
Identities = 58/128 (45%), Positives = 76/128 (59%), Gaps = 2/128 (1%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGK 267
MREIV I GQ G QIG WE+ EHGI P G D+ +E N +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 268 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVXT 447
+VPRAI VDLEP +D VR+G + ++F P+ + G+ A NN+A+GHYT G EL+D V
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 448 SFERKRNR 471
R R
Sbjct: 121 RVRRLTER 128
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 119 bits (286), Expect = 3e-27
Identities = 51/122 (41%), Positives = 74/122 (60%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 273
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 274 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVXTSF 453
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+V
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 454 ER 459
R
Sbjct: 121 RR 122
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 119 bits (286), Expect = 3e-27
Identities = 51/122 (41%), Positives = 74/122 (60%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 273
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 274 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVXTSF 453
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+V
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 454 ER 459
R
Sbjct: 121 RR 122
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 115 bits (277), Expect = 4e-26
Identities = 51/126 (40%), Positives = 77/126 (61%), Gaps = 2/126 (1%)
Frame = +1
Query: 88 NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASG 261
N+ RE++ I GQ G Q+G WE+ EHGI P G + + L ++ N +++E
Sbjct: 4 NRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMA 63
Query: 262 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 441
GK+VPRAI+VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 64 GKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVV 123
Query: 442 XTSFER 459
R
Sbjct: 124 MDRVRR 129
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 114 bits (275), Expect = 6e-26
Identities = 48/122 (39%), Positives = 72/122 (59%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 273
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 274 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVXTSF 453
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 454 ER 459
R
Sbjct: 121 RR 122
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 114 bits (275), Expect = 6e-26
Identities = 48/122 (39%), Positives = 72/122 (59%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 273
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 274 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVXTSF 453
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 454 ER 459
R
Sbjct: 121 RR 122
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 113 bits (273), Expect = 1e-25
Identities = 51/116 (43%), Positives = 73/116 (62%), Gaps = 1/116 (0%)
Frame = +1
Query: 97 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAY-HGDSDLQLERINVYYNEASGGKYV 273
RE V I GQ G QIG WE+ EHG+D G + + + + + +++E+ GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 274 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 441
PRAI VDLEP +D +R+G +G +F PD + G+ A NN+A+GHYT G EL+D V
Sbjct: 66 PRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVV 121
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 112 bits (270), Expect = 3e-25
Identities = 53/124 (42%), Positives = 75/124 (60%), Gaps = 3/124 (2%)
Frame = +1
Query: 97 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL---QLERINVYYNEASGGK 267
RE++ I GQ G QIG WE+ EHGI P G YH + D + E IN ++ E +GGK
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK 66
Query: 268 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVXT 447
+VPR + VDLEP +D VR+G + +F P+ + G+ A N +A+G YT G E++D V
Sbjct: 67 HVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMD 126
Query: 448 SFER 459
+R
Sbjct: 127 RVKR 130
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 112 bits (270), Expect = 3e-25
Identities = 48/116 (41%), Positives = 72/116 (62%), Gaps = 2/116 (1%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 267
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 268 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 435
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIID 116
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 112 bits (270), Expect = 3e-25
Identities = 48/116 (41%), Positives = 72/116 (62%), Gaps = 2/116 (1%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 267
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 268 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 435
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIID 116
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 112 bits (270), Expect = 3e-25
Identities = 48/116 (41%), Positives = 72/116 (62%), Gaps = 2/116 (1%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 267
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 268 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 435
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIID 116
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 110 bits (265), Expect = 1e-24
Identities = 47/115 (40%), Positives = 71/115 (61%), Gaps = 2/115 (1%)
Frame = +1
Query: 97 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 270
RE++ I GQ G QIG WE+ EHGI P G D L + + +++E G++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 271 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 435
VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIID 115
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 107 bits (257), Expect = 1e-23
Identities = 48/125 (38%), Positives = 74/125 (59%)
Frame = +1
Query: 94 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 273
MRE++ I GQ G QIG WE+ EHGI P G + D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGTSM-EPDGNSGSLGTFFSDTGYGRHV 59
Query: 274 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVXTSF 453
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E++D+
Sbjct: 60 PRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRI 119
Query: 454 ERKRN 468
R N
Sbjct: 120 RRLAN 124
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 91.1 bits (216), Expect = 9e-19
Identities = 44/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Frame = +1
Query: 103 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 282
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 283 ILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSV 441
+LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + +
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKI 120
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 91.1 bits (216), Expect = 9e-19
Identities = 44/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Frame = +1
Query: 103 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 282
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 283 ILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSV 441
+LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + +
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKI 120
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 90.2 bits (214), Expect = 2e-18
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 3/99 (3%)
Frame = +1
Query: 172 EHGIDPTGAYHGDSDL---QLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQ 342
EHGI P G YH + D + E IN ++ E +GGK+VPR + VDLEP +D VR+G +
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRS 63
Query: 343 IFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVXTSFER 459
+F P+ + G+ A N +A+G YT G E++D V +R
Sbjct: 64 LFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKR 102
>Z82074-1|CAB04928.2| 480|Caenorhabditis elegans Hypothetical
protein W06H12.1 protein.
Length = 480
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -3
Query: 520 RCPRXASVSVESLGQSHDSASFRTTXKLNRRAQHPPCSVP 401
+C + SV L HDSA+ TT +R ++ PP P
Sbjct: 77 KCTTCGATSVGLLSDCHDSATSTTTTVSHRSSEEPPRRKP 116
>AL132864-6|CAB63395.1| 480|Caenorhabditis elegans Hypothetical
protein W06H12.1 protein.
Length = 480
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -3
Query: 520 RCPRXASVSVESLGQSHDSASFRTTXKLNRRAQHPPCSVP 401
+C + SV L HDSA+ TT +R ++ PP P
Sbjct: 77 KCTTCGATSVGLLSDCHDSATSTTTTVSHRSSEEPPRRKP 116
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 160 IISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDL 297
I S+ H I T + H DS R + GG + R IL+D+
Sbjct: 101 IASEHHHISTTSSCHSDSGNSSSRDVITPFTVHGGASIGRLILIDI 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,056,140
Number of Sequences: 27780
Number of extensions: 269674
Number of successful extensions: 684
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 671
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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