Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_FL5_L04
(868 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 67 2e-13
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 65 9e-13
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 63 3e-12
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 61 1e-11
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 61 1e-11
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 61 1e-11
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 60 3e-11
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 59 5e-11
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 59 5e-11
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 59 6e-11
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 58 1e-10
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 57 2e-10
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 56 3e-10
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 56 3e-10
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 56 3e-10
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 54 1e-09
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 54 2e-09
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 54 2e-09
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 52 5e-09
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 48 1e-07
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 45 8e-07
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 45 1e-06
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 44 2e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 42 7e-06
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 36 6e-04
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 33 0.003
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 33 0.003
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 33 0.003
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 30 0.032
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 29 0.042
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 27 0.22
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 3.6
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.8
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 8.4
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 66.9 bits (156), Expect = 2e-13
Identities = 50/159 (31%), Positives = 71/159 (44%), Gaps = 9/159 (5%)
Frame = +3
Query: 69 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 227
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 228 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 401
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 402 VSNNGSVSWIKRLDXSTPISMQLDNWPXDMQTCTXKFGS 518
+ G V W + + + +P D QTC KFGS
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGS 165
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 64.9 bits (151), Expect = 9e-13
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 11/163 (6%)
Frame = +3
Query: 93 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 260
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 261 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 431
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 432 KRLDXSTPISMQLDNWPXDMQTCTXKFGS----RMPIVTKWIS 548
RL M L+N+P D Q C +FGS + ++ KW S
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGSFGYTKRDVIYKWNS 164
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 63.3 bits (147), Expect = 3e-12
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 9/153 (5%)
Frame = +3
Query: 87 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 245
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 246 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 419
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 420 VSWIKRLDXSTPISMQLDNWPXDMQTCTXKFGS 518
V W + + ++ +P D QTC KFGS
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGS 169
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 61.3 bits (142), Expect = 1e-11
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Frame = +3
Query: 165 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 338
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 339 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDXSTPISMQLDNWPXDMQTCTX 506
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 507 KFGS 518
KFGS
Sbjct: 168 KFGS 171
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 61.3 bits (142), Expect = 1e-11
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 12/166 (7%)
Frame = +3
Query: 57 LTCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRE 215
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 216 SESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL 392
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEV 119
Query: 393 ----RARVSNNGSVSWIKRLDXSTPISMQLDNWPXDMQTCTXKFGS 518
+A + + G V W + + ++ +P D QTC KFGS
Sbjct: 120 TIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGS 165
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 60.9 bits (141), Expect = 1e-11
Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 7/142 (4%)
Frame = +3
Query: 114 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 278
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 279 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDXST 452
W E+G L V S+ +WRPD+VL N A A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 453 PISMQLDNWPXDMQTCTXKFGS 518
+ ++ +P D QTC KFGS
Sbjct: 152 SCEIDVEYFPFDEQTCVLKFGS 173
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 60.1 bits (139), Expect = 3e-11
Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 12/147 (8%)
Frame = +3
Query: 114 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 272
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 273 LSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKR 437
L WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPP 151
Query: 438 LDXSTPISMQLDNWPXDMQTCTXKFGS 518
+ + ++ +P D Q+C KFGS
Sbjct: 152 AIYKSSCEINVEYFPFDEQSCIMKFGS 178
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 59.3 bits (137), Expect = 5e-11
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +3
Query: 204 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 377
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 378 GDYALRARVSNNGSVSWIKRLDXSTPISMQLDNWPXDMQTCTXKFGS 518
G Y V++NGS ++ + + + +P D Q C KFGS
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 199
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 59.3 bits (137), Expect = 5e-11
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +3
Query: 204 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 377
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 378 GDYALRARVSNNGSVSWIKRLDXSTPISMQLDNWPXDMQTCTXKFGS 518
G Y V++NGS ++ + + + +P D Q C KFGS
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 199
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 58.8 bits (136), Expect = 6e-11
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +3
Query: 204 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 377
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 378 GDYALRARVSNNGSVSWIKRLDXSTPISMQLDNWPXDMQTCTXKFGS 518
G Y V++NGS ++ + + + +P D Q C KFGS
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 131
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 58.0 bits (134), Expect = 1e-10
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +3
Query: 204 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 377
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 378 GDYALRARVSNNGSVSWIKRLDXSTPISMQLDNWPXDMQTCTXKFGS 518
G Y V+++GS ++ + M + +P D Q C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGS 131
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 58.0 bits (134), Expect = 1e-10
Identities = 41/145 (28%), Positives = 73/145 (50%), Gaps = 10/145 (6%)
Frame = +3
Query: 114 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 278
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 279 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 443
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 444 XSTPISMQLDNWPXDMQTCTXKFGS 518
+ S+ ++ +P D+QTC K GS
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKLGS 173
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 57.6 bits (133), Expect = 1e-10
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +3
Query: 204 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 377
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 378 GDYALRARVSNNGSVSWIKRLDXSTPISMQLDNWPXDMQTCTXKFGS 518
G Y V+++GS ++ + M + +P D Q C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGS 131
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 56.8 bits (131), Expect = 2e-10
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +3
Query: 204 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 377
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 378 GDYALRARVSNNGSVSWIKRLDXSTPISMQLDNWPXDMQTCTXKFGS 518
G Y V+++GS ++ + + + +P D Q C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 131
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 56.4 bits (130), Expect = 3e-10
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +3
Query: 204 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 377
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 378 GDYALRARVSNNGSVSWIKRLDXSTPISMQLDNWPXDMQTCTXKFGS 518
G Y V+++GS ++ + + + +P D Q C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGS 131
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 56.4 bits (130), Expect = 3e-10
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +3
Query: 204 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 377
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 378 GDYALRARVSNNGSVSWIKRLDXSTPISMQLDNWPXDMQTCTXKFGS 518
G Y V+++GS ++ + + + +P D Q C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGS 131
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 56.4 bits (130), Expect = 3e-10
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 7/165 (4%)
Frame = +3
Query: 45 YQFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NI 209
+ + A+A++ + +++ LL TY+ P +V++ L L ++
Sbjct: 4 WTLMAAIALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDV 63
Query: 210 RESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GD 383
E + L++ W D + WN ++G L + RLW+PDV++ N+A G
Sbjct: 64 DEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGT 123
Query: 384 YALRARVSNNGSVSWIKRLDXSTPISMQLDNWPXDMQTCTXKFGS 518
Y V NNG+ ++ + + + +P D Q C KFGS
Sbjct: 124 YPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGS 168
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 54.4 bits (125), Expect = 1e-09
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 3/120 (2%)
Frame = +3
Query: 168 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 344
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 345 VVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDXSTPISMQLDNWPXDMQTCTXKFGS 518
+L N A + V S+ G V W+ + + ++ +P D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 54.0 bits (124), Expect = 2e-09
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 10/154 (6%)
Frame = +3
Query: 87 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 251
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 252 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 422
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 423 SWIKRLDXSTPISMQLDN--WPXDMQTCTXKFGS 518
+ TP+ + D+ WP D+ CT S
Sbjct: 148 LCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIAS 179
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 54.0 bits (124), Expect = 2e-09
Identities = 41/166 (24%), Positives = 72/166 (43%), Gaps = 8/166 (4%)
Frame = +3
Query: 45 YQFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIR 212
+ +LL C ++ T+L + L YD + P S +I N+T+ L +
Sbjct: 29 FSYLLNCK-----NYDHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFD 83
Query: 213 ESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AG 380
+ S + + + + + W D LSW ++ G + V S+ +W PD+ + N+ T G
Sbjct: 84 DWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTG 143
Query: 381 DYALRARVSNNGSVSWIKRLDXSTPISMQLDNWPXDMQTCTXKFGS 518
V ++GSVS + + + +WP D C FGS
Sbjct: 144 IPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRINFGS 189
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 52.4 bits (120), Expect = 5e-09
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 8/147 (5%)
Frame = +3
Query: 102 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 266
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 267 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 437
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 438 LDXSTPISMQLDNWPXDMQTCTXKFGS 518
L M+L N+P D Q+C GS
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 47.6 bits (108), Expect = 1e-07
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 12/147 (8%)
Frame = +3
Query: 114 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 272
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 273 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 437
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 438 LDXSTPISMQLDNWPXDMQTCTXKFGS 518
+ + M L +P D Q C+ + S
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMAS 180
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 45.2 bits (102), Expect = 8e-07
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 13/149 (8%)
Frame = +3
Query: 93 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 260
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 261 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 413
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 414 GSVSWIKRLDXSTPISMQLDNWPXDMQTC 500
GS++ RL + M L +P D Q C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 44.8 bits (101), Expect = 1e-06
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 12/147 (8%)
Frame = +3
Query: 114 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 272
++D++L YD P D VV + + +R + I + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 273 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 437
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 438 LDXSTPISMQLDNWPXDMQTCTXKFGS 518
+ + M L +P D Q C+ + S
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMAS 180
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 44.0 bits (99), Expect = 2e-06
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 13/149 (8%)
Frame = +3
Query: 93 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 260
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 261 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 413
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 414 GSVSWIKRLDXSTPISMQLDNWPXDMQTC 500
GS++ RL + M L +P D Q C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 41.9 bits (94), Expect = 7e-06
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +3
Query: 207 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 386
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 387 ALR---ARVSNNGSVSWIKRLDXSTPISMQLDNWPXDMQTCTXKFGS 518
R R+S +GSV++ R + M L +P D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 35.5 bits (78), Expect = 6e-04
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Frame = +3
Query: 258 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 410
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 411 NGSVSWIKRLDXSTPISMQLDNWPXDMQTC 500
+GS++ RL + M L +P D Q C
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLC 91
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 33.5 bits (73), Expect = 0.003
Identities = 34/146 (23%), Positives = 63/146 (43%), Gaps = 8/146 (5%)
Frame = +3
Query: 90 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQM 254
E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 255 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 425
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 426 WIKRLDXSTPISMQLDNWPXDMQTCT 503
++ R +L+ +P D C+
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCS 201
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 33.5 bits (73), Expect = 0.003
Identities = 34/146 (23%), Positives = 63/146 (43%), Gaps = 8/146 (5%)
Frame = +3
Query: 90 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQM 254
E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 255 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 425
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 426 WIKRLDXSTPISMQLDNWPXDMQTCT 503
++ R +L+ +P D C+
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCS 201
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 33.5 bits (73), Expect = 0.003
Identities = 34/146 (23%), Positives = 63/146 (43%), Gaps = 8/146 (5%)
Frame = +3
Query: 90 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQM 254
E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 255 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 425
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 426 WIKRLDXSTPISMQLDNWPXDMQTCT 503
++ R +L+ +P D C+
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCS 201
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 29.9 bits (64), Expect = 0.032
Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 11/122 (9%)
Frame = +3
Query: 168 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 329
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 330 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDXSTPISMQLDNWPXDMQ 494
LW+PD LNA + AL + S+ N +V + R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 495 TC 500
C
Sbjct: 129 IC 130
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 29.5 bits (63), Expect = 0.042
Identities = 26/116 (22%), Positives = 49/116 (42%), Gaps = 4/116 (3%)
Frame = +3
Query: 168 IVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 341
+ VN++ L L A+ ES ++ LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 342 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDXSTPISMQLDNWPXDMQTCT 503
D ++ R+ NG+V+++ R +L+ +P D C+
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCS 252
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 27.1 bits (57), Expect = 0.22
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +3
Query: 330 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSWIKRLDXSTPISMQLDNWPXDMQTC 500
+W P V + N ++A T + + + +G V RL + ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 501 TXKFGS 518
F S
Sbjct: 157 PLIFES 162
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.0 bits (47), Expect = 3.6
Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Frame = +3
Query: 324 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDXSTPISMQLDNWPXDMQ 494
+ +WRPD NA + T + + + ++ ++ +L +M +P D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 495 TCTXKFGS 518
C + S
Sbjct: 176 ECKLQMES 183
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.8
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 311 PSAAAPLPCVPTQS 270
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.8 bits (44), Expect = 8.4
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -3
Query: 110 GQ*CCVFAFCRTSYSTSEEKLVTRII 33
G+ CC F T Y + K VT+ I
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQCI 627
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,439
Number of Sequences: 438
Number of extensions: 4950
Number of successful extensions: 86
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -