Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_FL5_K14
(904 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 58 1e-10
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 54 2e-09
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 54 2e-09
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 52 7e-09
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 52 7e-09
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 51 2e-08
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 51 2e-08
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 50 3e-08
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 49 7e-08
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 49 7e-08
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 48 1e-07
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 48 1e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 47 2e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 47 3e-07
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 47 3e-07
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 47 3e-07
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 46 5e-07
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 46 5e-07
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 43 4e-06
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 42 8e-06
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 42 1e-05
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 39 5e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 38 2e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 34 0.002
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 25 1.2
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.8
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 57.6 bits (133), Expect = 1e-10
Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 9/156 (5%)
Frame = +1
Query: 76 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 234
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 235 VRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 408
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 409 VSNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTFK 516
+ G V W + + + + D QTC K
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMK 162
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 54.0 bits (124), Expect = 2e-09
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 7/143 (4%)
Frame = +1
Query: 100 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 267
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 268 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 438
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 439 KRLDISTPISMQLDNWXNDMQTC 507
RL I M L+N+ D Q C
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRC 144
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 53.6 bits (123), Expect = 2e-09
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 9/150 (6%)
Frame = +1
Query: 94 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 252
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 253 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 426
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 427 VSWIKRLDISTPISMQLDNWXNDMQTCTFK 516
V W + + ++ + D QTC K
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMK 166
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 52.0 bits (119), Expect = 7e-09
Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 10/142 (7%)
Frame = +1
Query: 121 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 285
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 286 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 450
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 451 ISTPISMQLDNWXNDMQTCTFK 516
+ S+ ++ + D+QTC K
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLK 170
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 52.0 bits (119), Expect = 7e-09
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 7/139 (5%)
Frame = +1
Query: 121 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 285
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 286 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDIST 459
W E+G L V S+ +WRPD+VL NA A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 460 PISMQLDNWXNDMQTCTFK 516
+ ++ + D QTC K
Sbjct: 152 SCEIDVEYFPFDEQTCVLK 170
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 50.8 bits (116), Expect = 2e-08
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 12/162 (7%)
Frame = +1
Query: 67 TCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRES 225
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 226 ESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL- 399
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVT 120
Query: 400 ---RARVSNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTFK 516
+A + + G V W + + ++ + D QTC K
Sbjct: 121 IMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMK 162
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 50.8 bits (116), Expect = 2e-08
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 10/142 (7%)
Frame = +1
Query: 121 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 285
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 286 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 450
WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPPAI 153
Query: 451 ISTPISMQLDNWXNDMQTCTFK 516
+ + ++ + D Q+C K
Sbjct: 154 YKSSCEINVEYFPFDEQSCIMK 175
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 50.0 bits (114), Expect = 3e-08
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 6/121 (4%)
Frame = +1
Query: 172 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 345
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 346 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTF 513
PD+VL N A G+Y +R + + NG V W+ + ++ + + D QTC
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 514 K 516
K
Sbjct: 168 K 168
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.8 bits (111), Expect = 7e-08
Identities = 32/139 (23%), Positives = 64/139 (46%), Gaps = 7/139 (5%)
Frame = +1
Query: 121 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 285
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 286 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIST 459
WN E+ G ++ +LW+PD+++ N+A G Y V++NGS ++ +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 460 PISMQLDNWXNDMQTCTFK 516
+ + + D Q C K
Sbjct: 178 TCKIDITWFPFDDQHCDMK 196
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.8 bits (111), Expect = 7e-08
Identities = 32/139 (23%), Positives = 64/139 (46%), Gaps = 7/139 (5%)
Frame = +1
Query: 121 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 285
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 286 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIST 459
WN E+ G ++ +LW+PD+++ N+A G Y V++NGS ++ +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 460 PISMQLDNWXNDMQTCTFK 516
+ + + D Q C K
Sbjct: 178 TCKIDITWFPFDDQHCDMK 196
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 48.0 bits (109), Expect = 1e-07
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Frame = +1
Query: 211 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 384
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTFK 516
G Y V++NGS ++ + + + + D Q C K
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMK 128
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 48.0 bits (109), Expect = 1e-07
Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 3/117 (2%)
Frame = +1
Query: 175 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 351
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 352 VVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTFK 516
+L N A + VS+ G V W+ + + ++ + D Q C K
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLK 148
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 47.2 bits (107), Expect = 2e-07
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Frame = +1
Query: 211 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 384
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTFK 516
G Y V+++GS ++ + M + + D Q C K
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMK 128
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 46.8 bits (106), Expect = 3e-07
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Frame = +1
Query: 211 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 384
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTFK 516
G Y V+++GS ++ + M + + D Q C K
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMK 128
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 46.8 bits (106), Expect = 3e-07
Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 8/141 (5%)
Frame = +1
Query: 109 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 273
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 274 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 444
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 445 LDISTPISMQLDNWXNDMQTC 507
L I M+L N+ D Q+C
Sbjct: 156 LTIKAKCPMELRNFPMDRQSC 176
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 46.8 bits (106), Expect = 3e-07
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 10/149 (6%)
Frame = +1
Query: 94 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 258
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 259 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 429
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 430 SWIKRLDISTPISMQLDN--WXNDMQTCT 510
+ TP+ + D+ W D+ CT
Sbjct: 148 LCVP-FTTYTPV-CEYDHTWWPYDILNCT 174
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 46.0 bits (104), Expect = 5e-07
Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Frame = +1
Query: 211 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 384
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTFK 516
G Y V+++GS ++ + + + + D Q C K
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMK 128
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 46.0 bits (104), Expect = 5e-07
Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 7/155 (4%)
Frame = +1
Query: 73 AIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NIRESESTV 237
A+A++ + +++ LL TY+ E P ++ +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 238 RILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARV 411
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 412 SNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTFK 516
NNG+ ++ + + + + D Q C K
Sbjct: 131 KNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMK 165
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Frame = +1
Query: 211 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 384
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTFK 516
G Y V+++GS ++ + + + + D Q C K
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMK 128
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Frame = +1
Query: 211 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 384
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWXNDMQTCTFK 516
G Y V+++GS ++ + + + + D Q C K
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMK 128
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 42.7 bits (96), Expect = 4e-06
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 13/149 (8%)
Frame = +1
Query: 100 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 267
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 268 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 420
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 421 GSVSWIKRLDISTPISMQLDNWXNDMQTC 507
GS++ RL I+ M L + D Q C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 41.9 bits (94), Expect = 8e-06
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 12/144 (8%)
Frame = +1
Query: 121 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 279
++D++L YD E+ D +V + L +R A I + + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 280 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 444
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 445 LDISTPISMQLDNWXNDMQTCTFK 516
+ ++ M L + D Q C+ +
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLR 177
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 41.5 bits (93), Expect = 1e-05
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 13/149 (8%)
Frame = +1
Query: 100 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 267
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 268 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 420
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 421 GSVSWIKRLDISTPISMQLDNWXNDMQTC 507
GS++ RL I+ M L + D Q C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 39.1 bits (87), Expect = 5e-05
Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 12/144 (8%)
Frame = +1
Query: 121 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 279
++D++L YD E+ D VV + + +R + I + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 280 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 444
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 445 LDISTPISMQLDNWXNDMQTCTFK 516
+ ++ M L + D Q C+ +
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLR 177
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 37.5 bits (83), Expect = 2e-04
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 7/136 (5%)
Frame = +1
Query: 124 IDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWN 291
I +L YD P+ ++V + L + + I E I L W D+RL+++
Sbjct: 41 ISRILDGYDIRLRPNFGGEPLLVGMDLTIASFDAISEVNMDYTITMYLNQYWKDERLAFS 100
Query: 292 AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTP 462
E + +E++W PD N + D R R+S +GSV++ R +
Sbjct: 101 QEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLA 160
Query: 463 ISMQLDNWXNDMQTCT 510
M L + D Q CT
Sbjct: 161 CMMDLHYYPLDSQNCT 176
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 33.9 bits (74), Expect = 0.002
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Frame = +1
Query: 265 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 417
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 418 NGSVSWIKRLDISTPISMQLDNWXNDMQTC 507
+GS++ RL I+ M L + D Q C
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLC 91
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 24.6 bits (51), Expect = 1.2
Identities = 26/122 (21%), Positives = 51/122 (41%), Gaps = 11/122 (9%)
Frame = +1
Query: 175 IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 336
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 337 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWXNDMQ 501
LW+PD LNA + AL + S+ N +V + R+ M+ + D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 502 TC 507
C
Sbjct: 129 IC 130
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.8
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 318 PSAAAPFPCVPTQS 277
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,845
Number of Sequences: 438
Number of extensions: 4487
Number of successful extensions: 72
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29267238
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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