Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_FL5_K08
(874 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 46 3e-07
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 46 5e-07
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 44 2e-06
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 44 2e-06
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 44 2e-06
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 42 6e-06
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 42 6e-06
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 42 7e-06
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 42 7e-06
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 42 7e-06
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 42 1e-05
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 41 1e-05
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 41 2e-05
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 41 2e-05
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 40 3e-05
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 40 4e-05
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 40 4e-05
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 40 4e-05
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 38 1e-04
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 38 2e-04
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 36 5e-04
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 33 0.003
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 33 0.003
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 32 0.006
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 32 0.006
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 32 0.006
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 30 0.024
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 27 0.17
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 27 0.30
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 24 2.1
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 24 2.1
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 24 2.1
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 24 2.1
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 3.7
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 47.6 bits (108), Expect = 1e-07
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Frame = +3
Query: 318 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISXPISMQLDNWPNDM 485
+++W+PD+VL N A G+Y +R + + NG V W+ ++ + +P D
Sbjct: 106 DKVWKPDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQ 162
Query: 486 QTCTFKFGSRMXNSD 530
QTC KFGS N D
Sbjct: 163 QTCIMKFGSWTFNGD 177
Score = 25.4 bits (53), Expect = 0.69
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +2
Query: 158 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLTWNA---GGVGLQHL 304
K+ VN L ++ N+ E ++ L+ W D +L W+ GG+G+ L
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRL 103
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 46.4 bits (105), Expect = 3e-07
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISXPISMQLDNWPNDM 485
V S+ +WRPD+VL N A A +A + + G V W + ++ +P D
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDE 164
Query: 486 QTCTFKFGS 512
QTC KFGS
Sbjct: 165 QTCVLKFGS 173
Score = 22.2 bits (45), Expect = 6.4
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 288 TPPAFQVSRLSIQFI*RSACIRTVDSDSRML 196
+PPAF SR + C+R + ++ML
Sbjct: 471 SPPAFSHSRCPPEIHKSCICVRFIAEHTKML 501
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 46.0 bits (104), Expect = 5e-07
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISXPISMQLDNWPNDM 485
V S+ +WRPD+VL N A A +A ++ G V W + ++ +P D
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDE 160
Query: 486 QTCTFKFGS 512
QTC KFGS
Sbjct: 161 QTCVMKFGS 169
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 44.0 bits (99), Expect = 2e-06
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISXPISMQLDNWP 476
V S+ +WRPD+VL N A G+Y + +A V +G V W S+ ++ +P
Sbjct: 105 VPSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFP 161
Query: 477 NDMQTCTFKFGS 512
D+QTC K GS
Sbjct: 162 YDVQTCVLKLGS 173
Score = 22.2 bits (45), Expect = 6.4
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 288 TPPAFQVSRLSIQFI*RSACIRTVDSDSRML 196
+PPAF SR + C+R + ++ML
Sbjct: 471 SPPAFSHSRCPPEIHKSCICVRFIAEHTKML 501
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 44.0 bits (99), Expect = 2e-06
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Frame = +3
Query: 291 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISXPISM 458
G V SE +W PD+VL N A G+Y + +A + G VSW +
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPPAIYKSSCEI 160
Query: 459 QLDNWPNDMQTCTFKFGSRMXNSDXXD 539
++ +P D Q+C KFGS N D
Sbjct: 161 NVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 43.6 bits (98), Expect = 2e-06
Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +3
Query: 285 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISXPISM 458
E+G T L V SE +W PD+VL N A G + +A + G V W +
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEI 147
Query: 459 QLDNWPNDMQTCTFKFGS 512
+ +P D QTC KFGS
Sbjct: 148 DVRYFPFDQQTCFMKFGS 165
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 42.3 bits (95), Expect = 6e-06
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISXPISMQLDNWPNDM 485
++ +LW+PD+++ N+A G Y V++NGS ++ + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 486 QTCTFKFGSRMXNSDXXDXVI 548
Q C KFGS + + D V+
Sbjct: 191 QHCDMKFGSWTYDGNQVDLVL 211
Score = 25.0 bits (52), Expect = 0.91
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRIQADLQMNWIDKRLTWNAGGVG 292
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 42.3 bits (95), Expect = 6e-06
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISXPISMQLDNWPNDM 485
++ +LW+PD+++ N+A G Y V++NGS ++ + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 486 QTCTFKFGSRMXNSDXXDXVI 548
Q C KFGS + + D V+
Sbjct: 191 QHCDMKFGSWTYDGNQVDLVL 211
Score = 25.0 bits (52), Expect = 0.91
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRIQADLQMNWIDKRLTWNAGGVG 292
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 41.9 bits (94), Expect = 7e-06
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISXPISMQLDNWPNDM 485
++ +LW+PD+++ N+A G Y V++NGS ++ + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 486 QTCTFKFGSRMXNSDXXDXVI 548
Q C KFGS + + D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.0 bits (52), Expect = 0.91
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRIQADLQMNWIDKRLTWNAGGVG 292
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 41.9 bits (94), Expect = 7e-06
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +3
Query: 318 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISXPISMQLDNWPNDMQ 488
ER+WRPD N + + R+S +G + + RL I M+L N+P D Q
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQ 174
Query: 489 TCTFKFGS 512
+C GS
Sbjct: 175 SCPLILGS 182
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 41.9 bits (94), Expect = 7e-06
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = +3
Query: 291 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISXPISM 458
G T V SE +W PD+VL N A G+Y + +A + + G V W +
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEI 147
Query: 459 QLDNWPNDMQTCTFKFGS 512
++ +P D QTC KFGS
Sbjct: 148 DVEYFPFDEQTCFMKFGS 165
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 41.5 bits (93), Expect = 1e-05
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISXPISMQLDNWPNDM 485
+ RLW+PDV++ N+A G Y V NNG+ ++ + + +P D
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 486 QTCTFKFGS 512
Q C KFGS
Sbjct: 160 QRCEMKFGS 168
Score = 23.8 bits (49), Expect = 2.1
Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 7/91 (7%)
Frame = +2
Query: 41 RFLLTCAIASAAE--CENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-N 199
R+ L AIA AA + +++ LL TY+ P +V++ L L +
Sbjct: 3 RWTLMAAIALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIID 62
Query: 200 IRESESTVRIQADLQMNWIDKRLTWNAGGVG 292
+ E + L++ W D + WN G
Sbjct: 63 VDEKNQLLITNLWLKLEWNDVNMRWNVSDYG 93
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 41.1 bits (92), Expect = 1e-05
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISXPISMQLDNWPNDM 485
++ +LW+PD+++ N+A G Y V+++GS ++ M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDD 122
Query: 486 QTCTFKFGSRMXNSDXXDXVI 548
Q C KFGS + + D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.0 bits (52), Expect = 0.91
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRIQADLQMNWIDKRLTWNAGGVG 292
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 40.7 bits (91), Expect = 2e-05
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISXPISMQLDNWPNDM 485
++ +LW+PD+++ N+A G Y V+++GS ++ M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDD 122
Query: 486 QTCTFKFGSRMXNSDXXDXVI 548
Q C KFGS + + D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.0 bits (52), Expect = 0.91
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRIQADLQMNWIDKRLTWNAGGVG 292
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 40.7 bits (91), Expect = 2e-05
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISXPISMQLDNWPN 479
V S+ +W PD+ + N+ T G V ++GSVS + + + +WP
Sbjct: 119 VKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPY 178
Query: 480 DMQTCTFKFGSRMXNSDXXDXVIDKR 557
D C FGS + + + + +DK+
Sbjct: 179 DTHRCRINFGSWVHSGEEVNIFLDKK 204
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 39.9 bits (89), Expect = 3e-05
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISXPISMQLDNWPNDM 485
++ +LW+PD+++ N+A G Y V+++GS ++ + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 486 QTCTFKFGSRMXNSDXXDXVI 548
Q C KFGS + + D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.0 bits (52), Expect = 0.91
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRIQADLQMNWIDKRLTWNAGGVG 292
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 39.5 bits (88), Expect = 4e-05
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISXPISMQLDNWPNDM 485
++ +LW+PD+++ N+A G Y V+++GS ++ + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDD 122
Query: 486 QTCTFKFGSRMXNSDXXDXVI 548
Q C KFGS + + D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.0 bits (52), Expect = 0.91
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRIQADLQMNWIDKRLTWNAGGVG 292
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 39.5 bits (88), Expect = 4e-05
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISXPISMQLDNWPNDM 485
++ +LW+PD+++ N+A G Y V+++GS ++ + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDD 122
Query: 486 QTCTFKFGSRMXNSDXXDXVI 548
Q C KFGS + + D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 25.0 bits (52), Expect = 0.91
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRIQADLQMNWIDKRLTWNAGGVG 292
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 39.5 bits (88), Expect = 4e-05
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +3
Query: 321 RLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWIKRLDISXPISMQLDNWPNDMQT 491
R+W+PD N + T R+ +G V + RL I M L+N+P D Q
Sbjct: 84 RIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQR 143
Query: 492 CTFKFGS 512
C +FGS
Sbjct: 144 CPLQFGS 150
Score = 33.9 bits (74), Expect = 0.002
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +2
Query: 86 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 253
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 254 IDKRLTWNAG 283
+D+RL + G
Sbjct: 62 VDRRLAFQGG 71
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 37.9 bits (84), Expect = 1e-04
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +2
Query: 80 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 244
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 245 MNWIDKRLTWNA 280
+ W LTW +
Sbjct: 88 LMWEQSHLTWKS 99
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 37.5 bits (83), Expect = 2e-04
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDISXPISMQLDNWPND 482
V R+WRPD +L N A + V S+ G V W+ + ++ +P D
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFD 141
Query: 483 MQTCTFKFGS 512
Q C K+ S
Sbjct: 142 EQRCVLKWAS 151
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 35.9 bits (79), Expect = 5e-04
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +3
Query: 315 SERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISXPISMQLDNWPNDM 485
+E++W PD N + D R R+S +GSV++ R + M L +P D
Sbjct: 113 AEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDS 172
Query: 486 QTCTFKFGS 512
Q CT + S
Sbjct: 173 QNCTVEIES 181
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 33.5 bits (73), Expect = 0.003
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = +3
Query: 306 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISXPISMQLDNWP 476
L + R+W PD+ N + + R+ NGSV + R+ ++ M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 477 NDMQTCTFKFGSRMXNSD 530
D Q C+ + S +D
Sbjct: 169 LDRQVCSLRMASYGWTTD 186
Score = 27.9 bits (59), Expect = 0.13
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Frame = +2
Query: 107 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 265
++D++L YD P D VV + + +R + I + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 266 LTWNAGGVGLQHL 304
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 33.5 bits (73), Expect = 0.003
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = +3
Query: 306 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISXPISMQLDNWP 476
L + R+W PD+ N + + R+ NGSV + R+ ++ M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 477 NDMQTCTFKFGSRMXNSD 530
D Q C+ + S +D
Sbjct: 169 LDRQVCSLRMASYGWTTD 186
Score = 30.7 bits (66), Expect = 0.018
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Frame = +2
Query: 107 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 265
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 266 LTWNAGGVGLQHL 304
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 32.3 bits (70), Expect = 0.006
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
Frame = +3
Query: 291 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 443
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 444 XPISMQLDNWPNDMQTCTFKFGS 512
M L +P D Q C + S
Sbjct: 136 ASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 32.3 bits (70), Expect = 0.006
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
Frame = +3
Query: 291 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 443
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 444 XPISMQLDNWPNDMQTCTFKFGS 512
M L +P D Q C + S
Sbjct: 136 ASCPMNLQYFPMDRQLCHIEIES 158
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 32.3 bits (70), Expect = 0.006
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
Frame = +3
Query: 291 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 443
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 18 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 74
Query: 444 XPISMQLDNWPNDMQTCTFKFGS 512
M L +P D Q C + S
Sbjct: 75 ASCPMNLQYFPMDRQLCHIEIES 97
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 30.3 bits (65), Expect = 0.024
Identities = 14/66 (21%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +3
Query: 324 LWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISXPISMQLDNWPNDMQTC 494
+WRPD NA T + ++ + ++ ++ ++ +L + +M+ +++P+D Q C
Sbjct: 87 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQIC 146
Query: 495 TFKFGS 512
+ S
Sbjct: 147 SMMIES 152
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 27.5 bits (58), Expect = 0.17
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = +3
Query: 318 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISXPISMQLDNWPND 482
+ LW+PD LNA + AL + S+ N +V + R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 483 MQTC 494
+Q C
Sbjct: 127 IQIC 130
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 26.6 bits (56), Expect = 0.30
Identities = 15/74 (20%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +3
Query: 318 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISXPISMQLDNWPNDMQ 488
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 489 TCTFKFGSRMXNSD 530
C + S +D
Sbjct: 176 ECKLQMESLSHTTD 189
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 23.8 bits (49), Expect = 2.1
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +3
Query: 393 RVSNNGSVSWIKRLDISXPISMQLDNWPNDMQTCTFKFGS 512
R+ NG+V+++ R + +L+ +P D C+F S
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.8 bits (49), Expect = 2.1
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +3
Query: 393 RVSNNGSVSWIKRLDISXPISMQLDNWPNDMQTCTFKFGS 512
R+ NG+V+++ R + +L+ +P D C+F S
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.8 bits (49), Expect = 2.1
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +3
Query: 393 RVSNNGSVSWIKRLDISXPISMQLDNWPNDMQTCTFKFGS 512
R+ NG+V+++ R + +L+ +P D C+F S
Sbjct: 218 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 257
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 23.8 bits (49), Expect = 2.1
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +3
Query: 393 RVSNNGSVSWIKRLDISXPISMQLDNWPNDMQTCTFKFGS 512
R+ NG+V+++ R + +L+ +P D C+F S
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -1
Query: 103 GQ*CCVFAFCRTSYSTSEEKPVTRII 26
G+ CC F T Y + K VT+ I
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQCI 627
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,583
Number of Sequences: 438
Number of extensions: 5575
Number of successful extensions: 73
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -