Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_FL5_K02
(862 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 125 9e-29
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 125 9e-29
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 114 1e-25
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 101 2e-21
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 96 5e-20
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 96 5e-20
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 95 1e-19
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 86 5e-17
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 86 5e-17
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 69 1e-11
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 65 1e-10
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 63 4e-10
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 63 4e-10
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 63 4e-10
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 63 4e-10
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 63 4e-10
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 60 4e-09
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 60 4e-09
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 60 4e-09
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 60 4e-09
U14102-1|AAC46495.1| 299|Drosophila melanogaster putative rever... 45 2e-04
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 40 0.003
AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ... 34 0.22
BT003186-1|AAO24941.1| 756|Drosophila melanogaster RE65015p pro... 31 1.5
AY119084-1|AAM50944.1| 543|Drosophila melanogaster LP10938p pro... 31 1.5
AY069838-1|AAL39983.1| 555|Drosophila melanogaster SD08447p pro... 31 1.5
AE014298-1054|AAF46269.1| 555|Drosophila melanogaster CG12155-P... 31 1.5
AE013599-3359|AAF46819.1| 543|Drosophila melanogaster CG3292-PA... 31 1.5
BT012324-1|AAS77449.1| 381|Drosophila melanogaster AT25482p pro... 31 2.0
BT011556-1|AAS15692.1| 293|Drosophila melanogaster AT30717p pro... 31 2.0
AY075365-1|AAR82806.1| 301|Drosophila melanogaster GM08848p pro... 31 2.0
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 31 2.0
AE014298-807|AAF46093.1| 293|Drosophila melanogaster CG15764-PA... 31 2.0
AE014297-1138|AAN13466.1| 1420|Drosophila melanogaster CG12819-P... 31 2.0
AE014297-1137|AAF54522.2| 1430|Drosophila melanogaster CG12819-P... 31 2.0
BT010037-1|AAQ22506.1| 409|Drosophila melanogaster LD43171p pro... 31 2.7
AE014298-2534|AAN09435.1| 409|Drosophila melanogaster CG32564-P... 31 2.7
AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein. 30 3.6
BT004847-1|AAO45203.1| 955|Drosophila melanogaster RE70412p pro... 30 4.7
AY128472-1|AAM75065.1| 836|Drosophila melanogaster RE28238p pro... 30 4.7
AE014298-2109|AAF48429.2| 955|Drosophila melanogaster CG9095-PA... 30 4.7
AE014134-2320|AAN10833.1| 836|Drosophila melanogaster CG6043-PC... 30 4.7
AE014134-2318|AAN10831.1| 759|Drosophila melanogaster CG6043-PB... 30 4.7
AE014134-2317|AAF53274.2| 759|Drosophila melanogaster CG6043-PA... 30 4.7
AE014134-2316|AAN10830.1| 918|Drosophila melanogaster CG6043-PD... 30 4.7
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 29 6.2
AY071124-1|AAL48746.1| 420|Drosophila melanogaster RE17165p pro... 29 8.2
AE014296-2897|AAF49349.4| 926|Drosophila melanogaster CG13731-P... 29 8.2
AE014296-850|AAF47902.2| 420|Drosophila melanogaster CG15021-PA... 29 8.2
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 125 bits (301), Expect = 9e-29
Identities = 61/201 (30%), Positives = 109/201 (54%)
Frame = +2
Query: 122 PGSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFK 301
P + L+LFADD A+Y + + +++ +Q+ + +++KW+I INP K+ A+ F
Sbjct: 685 PQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAIFFT 744
Query: 302 RGRPPNTTLSIPLPTRRVNNPAPAVRPITMYDQPIPWAPKVKYLGVTLDSRMTFRPHIKT 481
+ R P LP R++ + D PI W ++YLG+ D ++TF+ HI
Sbjct: 745 KRRKPRY-----LPDRQLR----------ILDSPIQWVDNIRYLGIIFDKKLTFKYHINN 789
Query: 482 VRDRAAFILGRLYPMICRRSKMSLRNKMTLYKTCIRPVMTYASVVFAHAXRIHLKSFQII 661
+ I+ LYP+I R+SK+S+ NK+ ++KT P++ Y S V+ + H+K QI
Sbjct: 790 TIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQIC 849
Query: 662 QSRFCRIAVGTPWFVRNVDLH 724
Q++ ++ + P++ LH
Sbjct: 850 QNKLLKLIMNLPYYTNTKYLH 870
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 125 bits (301), Expect = 9e-29
Identities = 61/201 (30%), Positives = 109/201 (54%)
Frame = +2
Query: 122 PGSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFK 301
P + L+LFADD A+Y + + +++ +Q+ + +++KW+I INP K+ A+ F
Sbjct: 633 PQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAIFFT 692
Query: 302 RGRPPNTTLSIPLPTRRVNNPAPAVRPITMYDQPIPWAPKVKYLGVTLDSRMTFRPHIKT 481
+ R P LP R++ + D PI W ++YLG+ D ++TF+ HI
Sbjct: 693 KRRKPRY-----LPDRQLR----------ILDSPIQWVDNIRYLGIIFDKKLTFKYHINN 737
Query: 482 VRDRAAFILGRLYPMICRRSKMSLRNKMTLYKTCIRPVMTYASVVFAHAXRIHLKSFQII 661
+ I+ LYP+I R+SK+S+ NK+ ++KT P++ Y S V+ + H+K QI
Sbjct: 738 TIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQIC 797
Query: 662 QSRFCRIAVGTPWFVRNVDLH 724
Q++ ++ + P++ LH
Sbjct: 798 QNKLLKLIMNLPYYTNTKYLH 818
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 114 bits (275), Expect = 1e-25
Identities = 69/199 (34%), Positives = 96/199 (48%), Gaps = 2/199 (1%)
Frame = +2
Query: 143 LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLF--KRGRPP 316
LA FADD + Y R + +Q A +W R+W I IN +KS V F KR PP
Sbjct: 671 LATFADDVCVTYRSRCEHDAADGIQDFAYRFSEWARRWNIGINSSKSNNVCFTLKRRTPP 730
Query: 317 NTTLSIPLPTRRVNNPAPAVRPITMYDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRA 496
P+ + + P+P KYLGV LD R+TF H+ +R R
Sbjct: 731 ---------------------PVYIEEVPVPQPNAAKYLGVLLDRRLTFSKHVTDIRTRL 769
Query: 497 AFILGRLYPMICRRSKMSLRNKMTLYKTCIRPVMTYASVVFAHAXRIHLKSFQIIQSRFC 676
+ + Y ++ RSK+SL NK+T+YK + P Y ++ A H+K Q IQ++
Sbjct: 770 RAKVAKHYWLLSSRSKLSLSNKLTIYKQILAPNWKYGCQIWGLACDSHIKRIQAIQNKVA 829
Query: 677 RIAVGTPWFVRNVDLHDXL 733
R+ G WFVRN LH L
Sbjct: 830 RLITGCEWFVRNTTLHRDL 848
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 101 bits (241), Expect = 2e-21
Identities = 64/198 (32%), Positives = 95/198 (47%)
Frame = +2
Query: 143 LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNT 322
LA +ADD A+ YS R LQ TT+ W ++W + +NP K+ F
Sbjct: 675 LATYADDIALLYSSNCCNEAARGLQEYLTTLAAWCKRWILKVNPQKTINPCF-------- 726
Query: 323 TLSIPLPTRRVNNPAPAVRPITMYDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAF 502
TL P AP + DQP + KYLG+TLD R+TF PH+K R
Sbjct: 727 TLKTLSPV-----TAPIELEGVILDQP----SQAKYLGITLDKRLTFGPHLKATTRRCYQ 777
Query: 503 ILGRLYPMICRRSKMSLRNKMTLYKTCIRPVMTYASVVFAHAXRIHLKSFQIIQSRFCRI 682
+ +L ++ R+S M+LR K +Y C+ P+ Y ++ A + + Q++Q+R R
Sbjct: 778 RMQQLRWLLNRKSTMTLRAKRAVYVHCVAPIWLYGIQIWGIAAKSNYNRIQVLQNRAMRA 837
Query: 683 AVGTPWFVRNVDLHDXLN 736
P++VR LH LN
Sbjct: 838 ITDCPYYVRGTTLHRDLN 855
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 96.3 bits (229), Expect = 5e-20
Identities = 65/194 (33%), Positives = 93/194 (47%)
Frame = +2
Query: 152 FADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLS 331
FADDTAI + L T++ +W WRI IN K V F TL+
Sbjct: 665 FADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQVTF--------TLN 716
Query: 332 IPLPTRRVNNPAPAVRPITMYDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILG 511
P P+ + + IP A +V YLGV LD R+T+R HI+
Sbjct: 717 --------KQTCP---PLVLNNICIPQADEVTYLGVHLDRRLTWRKHIEAKSKHLKLKAR 765
Query: 512 RLYPMICRRSKMSLRNKMTLYKTCIRPVMTYASVVFAHAXRIHLKSFQIIQSRFCRIAVG 691
L+ +I RS +SL K LY + ++P+ TY S ++ +A R ++ Q QSR RI G
Sbjct: 766 NLHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITG 825
Query: 692 TPWFVRNVDLHDXL 733
PW++RN ++H L
Sbjct: 826 APWYLRNENIHRDL 839
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 96.3 bits (229), Expect = 5e-20
Identities = 65/194 (33%), Positives = 93/194 (47%)
Frame = +2
Query: 152 FADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLS 331
FADDTAI + L T++ +W WRI IN K V F TL+
Sbjct: 665 FADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQVTF--------TLN 716
Query: 332 IPLPTRRVNNPAPAVRPITMYDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILG 511
P P+ + + IP A +V YLGV LD R+T+R HI+
Sbjct: 717 --------KQTCP---PLVLNNICIPQADEVTYLGVHLDRRLTWRKHIEAKSKHLKLKAR 765
Query: 512 RLYPMICRRSKMSLRNKMTLYKTCIRPVMTYASVVFAHAXRIHLKSFQIIQSRFCRIAVG 691
L+ +I RS +SL K LY + ++P+ TY S ++ +A R ++ Q QSR RI G
Sbjct: 766 NLHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITG 825
Query: 692 TPWFVRNVDLHDXL 733
PW++RN ++H L
Sbjct: 826 APWYLRNENIHRDL 839
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 94.7 bits (225), Expect = 1e-19
Identities = 65/217 (29%), Positives = 104/217 (47%)
Frame = +2
Query: 86 PXYYSVCISTIYPGSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRID 265
P Y + + I P + ++ FADDTAI R +L + +W WRI
Sbjct: 646 PTLYLIYTADI-PTNSRLTVSTFADDTAILSRSRSPIQATAQLALYLIDIKKWLSDWRIK 704
Query: 266 INPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMYDQPIPWAPKVKYLGVTL 445
+N K V F TL+ R + P P+ + P+P A +V YLGV L
Sbjct: 705 VNEQKCKHVTF--------TLN------RQDCP-----PLLLNSIPLPKADEVTYLGVHL 745
Query: 446 DSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKMTLYKTCIRPVMTYASVVFAH 625
D R+T+R HI+ + + L+ +I S +SL +K+ LY + ++P+ TY S ++ +
Sbjct: 746 DRRLTWRRHIEAKKTQLKLKANNLHWLINSGSPLSLDHKVLLYNSILKPIWTYGSQLWGN 805
Query: 626 AXRIHLKSFQIIQSRFCRIAVGTPWFVRNVDLHDXLN 736
A ++ Q QS+ R G PW+VR+ ++ LN
Sbjct: 806 ASNSNIDIIQRAQSKILRTITGAPWYVRSENIQRDLN 842
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 86.2 bits (204), Expect = 5e-17
Identities = 63/223 (28%), Positives = 98/223 (43%), Gaps = 7/223 (3%)
Frame = +2
Query: 86 PXYYSVCISTIYPGSPETH-------LALFADDTAIYYSCRKKALLHRRLQTAATTMGQW 244
P YSV S + +P T +A +ADDTA+ + LQ QW
Sbjct: 650 PTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQQW 709
Query: 245 FRKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMYDQPIPWAPKV 424
W + IN K V F N T S P +++ + I
Sbjct: 710 AENWNVRINAEKCANVTFA-----NRTGSCP--------------GVSLNGRLIRHHQAY 750
Query: 425 KYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKMTLYKTCIRPVMTY 604
KYLG+TLD ++TF HI ++ + R+ +I R+K+SL K+ +YK+ + P + Y
Sbjct: 751 KYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFY 810
Query: 605 ASVVFAHAXRIHLKSFQIIQSRFCRIAVGTPWFVRNVDLHDXL 733
V+ A + HL +I+Q++ R G PW++R D+ L
Sbjct: 811 GLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDL 853
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p protein.
Length = 718
Score = 86.2 bits (204), Expect = 5e-17
Identities = 63/223 (28%), Positives = 98/223 (43%), Gaps = 7/223 (3%)
Frame = +2
Query: 86 PXYYSVCISTIYPGSPETH-------LALFADDTAIYYSCRKKALLHRRLQTAATTMGQW 244
P YSV S + +P T +A +ADDTA+ + LQ QW
Sbjct: 452 PTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQQW 511
Query: 245 FRKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMYDQPIPWAPKV 424
W + IN K V F N T S P +++ + I
Sbjct: 512 AENWNVRINAEKCANVTFA-----NRTGSCP--------------GVSLNGRLIRHHQAY 552
Query: 425 KYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKMTLYKTCIRPVMTY 604
KYLG+TLD ++TF HI ++ + R+ +I R+K+SL K+ +YK+ + P + Y
Sbjct: 553 KYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFY 612
Query: 605 ASVVFAHAXRIHLKSFQIIQSRFCRIAVGTPWFVRNVDLHDXL 733
V+ A + HL +I+Q++ R G PW++R D+ L
Sbjct: 613 GLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDL 655
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 68.5 bits (160), Expect = 1e-11
Identities = 61/231 (26%), Positives = 98/231 (42%), Gaps = 8/231 (3%)
Frame = +2
Query: 59 PESARLRPLPXYYSVCIST-----IYPGSPETHLAL--FADDTAIYYSCRKKALLHRRLQ 217
P+ + L PL YS+ S IY SP + L +ADDT + S R +
Sbjct: 699 PQGSNLGPL--LYSIFSSDMPLPYIYRPSPTQRIMLSTYADDTIVLSSDTLATAATRNNE 756
Query: 218 TAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMYD 397
T W KW I +N K+ V+F TL LPT +N + +
Sbjct: 757 NYLKTFSDWADKWGISVNAAKTGHVIF--------TLKNDLPTNSMN--------VKIKG 800
Query: 398 QPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKMTLYK 577
Q I K YLGVTLDS++T H+ + + + +L ++ RSK+ + K+ + K
Sbjct: 801 QTIKKESKQSYLGVTLDSKLTLSSHVTKLLGKYSTAYRKLTWILNGRSKLPTKTKILILK 860
Query: 578 TCIRPVMTYASVVFAH-AXRIHLKSFQIIQSRFCRIAVGTPWFVRNVDLHD 727
+ + P+ YA + ++ Q+ ++R R + RN + D
Sbjct: 861 SVLSPIWQYAIAAWGPLVTDAQIRRVQVEENRKIRDICRAGRYTRNQTIRD 911
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 64.9 bits (151), Expect = 1e-10
Identities = 54/190 (28%), Positives = 84/190 (44%), Gaps = 7/190 (3%)
Frame = +2
Query: 59 PESARLRPLPXYYSVCIST-----IYPGSPETHLAL--FADDTAIYYSCRKKALLHRRLQ 217
P+ + L PL YS+ S IY SP + L +ADDT + S R +
Sbjct: 687 PQGSNLGPL--LYSIFSSDMPLPYIYRPSPTERIMLSTYADDTIVLSSDTLATAATRNNE 744
Query: 218 TAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMYD 397
+ W KW I +N K+ V+F TL LPT ++R + +
Sbjct: 745 NYLKSFSDWADKWGISVNAAKTGHVIF--------TLKNDLPT--------SLRTMKIKG 788
Query: 398 QPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKMTLYK 577
Q I K YLGV LDS++T H+ + + ++ ++ RRSK+ + KM + K
Sbjct: 789 QVIKIESKQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILK 848
Query: 578 TCIRPVMTYA 607
+ + P+ YA
Sbjct: 849 SVLSPIWQYA 858
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 63.3 bits (147), Expect = 4e-10
Identities = 57/231 (24%), Positives = 96/231 (41%), Gaps = 8/231 (3%)
Frame = +2
Query: 59 PESARLRPLPXYYSVCIST-----IYPGSPETHLAL--FADDTAIYYSCRKKALLHRRLQ 217
P+ + L P+ YS+ S IY SP + L +ADDT + S R +
Sbjct: 571 PQGSNLGPI--LYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNE 628
Query: 218 TAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMYD 397
T W KW I +N K+ V++ TL +PT ++ + +
Sbjct: 629 NYLKTFSDWADKWGISVNAAKTGHVIY--------TLKNDIPTN--------LKTMKIKG 672
Query: 398 QPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKMTLYK 577
Q I K YLGV LDS++T PH+ V + ++ ++ RSK+ KM + K
Sbjct: 673 QAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILK 732
Query: 578 TCIRPVMTYASVVFAH-AXRIHLKSFQIIQSRFCRIAVGTPWFVRNVDLHD 727
+ + P+ YA + ++ Q+ ++R R + +N + D
Sbjct: 733 SVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRD 783
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 63.3 bits (147), Expect = 4e-10
Identities = 57/231 (24%), Positives = 96/231 (41%), Gaps = 8/231 (3%)
Frame = +2
Query: 59 PESARLRPLPXYYSVCIST-----IYPGSPETHLAL--FADDTAIYYSCRKKALLHRRLQ 217
P+ + L P+ YS+ S IY SP + L +ADDT + S R +
Sbjct: 687 PQGSNLGPI--LYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNE 744
Query: 218 TAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMYD 397
T W KW I +N K+ V++ TL +PT ++ + +
Sbjct: 745 NYLKTFSDWADKWGISVNAAKTGHVIY--------TLKNDIPTN--------LKTMKIKG 788
Query: 398 QPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKMTLYK 577
Q I K YLGV LDS++T PH+ V + ++ ++ RSK+ KM + K
Sbjct: 789 QAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILK 848
Query: 578 TCIRPVMTYASVVFAH-AXRIHLKSFQIIQSRFCRIAVGTPWFVRNVDLHD 727
+ + P+ YA + ++ Q+ ++R R + +N + D
Sbjct: 849 SVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRD 899
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 63.3 bits (147), Expect = 4e-10
Identities = 57/231 (24%), Positives = 96/231 (41%), Gaps = 8/231 (3%)
Frame = +2
Query: 59 PESARLRPLPXYYSVCIST-----IYPGSPETHLAL--FADDTAIYYSCRKKALLHRRLQ 217
P+ + L P+ YS+ S IY SP + L +ADDT + S R +
Sbjct: 687 PQGSNLGPI--LYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNE 744
Query: 218 TAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMYD 397
T W KW I +N K+ V++ TL +PT ++ + +
Sbjct: 745 NYLKTFSDWADKWGISVNAAKTGHVIY--------TLKNDIPTN--------LKTMKIKG 788
Query: 398 QPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKMTLYK 577
Q I K YLGV LDS++T PH+ V + ++ ++ RSK+ KM + K
Sbjct: 789 QAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILK 848
Query: 578 TCIRPVMTYASVVFAH-AXRIHLKSFQIIQSRFCRIAVGTPWFVRNVDLHD 727
+ + P+ YA + ++ Q+ ++R R + +N + D
Sbjct: 849 SVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRD 899
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 63.3 bits (147), Expect = 4e-10
Identities = 57/231 (24%), Positives = 96/231 (41%), Gaps = 8/231 (3%)
Frame = +2
Query: 59 PESARLRPLPXYYSVCIST-----IYPGSPETHLAL--FADDTAIYYSCRKKALLHRRLQ 217
P+ + L P+ YS+ S IY SP + L +ADDT + S R +
Sbjct: 649 PQGSNLGPI--LYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNE 706
Query: 218 TAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMYD 397
T W KW I +N K+ V++ TL +PT ++ + +
Sbjct: 707 NYLKTFSDWADKWGISVNAAKTGHVIY--------TLKNDIPTN--------LKTMKIKG 750
Query: 398 QPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKMTLYK 577
Q I K YLGV LDS++T PH+ V + ++ ++ RSK+ KM + K
Sbjct: 751 QAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILK 810
Query: 578 TCIRPVMTYASVVFAH-AXRIHLKSFQIIQSRFCRIAVGTPWFVRNVDLHD 727
+ + P+ YA + ++ Q+ ++R R + +N + D
Sbjct: 811 SVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRD 861
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 63.3 bits (147), Expect = 4e-10
Identities = 57/231 (24%), Positives = 96/231 (41%), Gaps = 8/231 (3%)
Frame = +2
Query: 59 PESARLRPLPXYYSVCIST-----IYPGSPETHLAL--FADDTAIYYSCRKKALLHRRLQ 217
P+ + L P+ YS+ S IY SP + L +ADDT + S R +
Sbjct: 687 PQGSNLGPI--LYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNE 744
Query: 218 TAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMYD 397
T W KW I +N K+ V++ TL +PT ++ + +
Sbjct: 745 NYLKTFSDWADKWGISVNAAKTGHVIY--------TLKNDIPTN--------LKTMKIKG 788
Query: 398 QPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKMTLYK 577
Q I K YLGV LDS++T PH+ V + ++ ++ RSK+ KM + K
Sbjct: 789 QAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILK 848
Query: 578 TCIRPVMTYASVVFAH-AXRIHLKSFQIIQSRFCRIAVGTPWFVRNVDLHD 727
+ + P+ YA + ++ Q+ ++R R + +N + D
Sbjct: 849 SVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRD 899
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 60.1 bits (139), Expect = 4e-09
Identities = 47/199 (23%), Positives = 81/199 (40%), Gaps = 1/199 (0%)
Frame = +2
Query: 143 LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNT 322
LA +ADDT I + L Q +W +KW I IN K+ +LF +
Sbjct: 284 LATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTN 343
Query: 323 TLSIPLPTRRVNNPAPAVRPITMYDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAF 502
+ PL +N A K +YLG+ LD R+TF H+ ++ +
Sbjct: 344 IYTPPL----INGQRAAK------------LNKQRYLGLMLDRRLTFCAHMTLLKGKTIA 387
Query: 503 ILGRLYPMICRRSKMSLRNKMTLYKTCIRPVMTYASVVFAH-AXRIHLKSFQIIQSRFCR 679
+L +I + S + K+ L+K + P+ YA ++ K Q +++++ R
Sbjct: 388 AYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIR 447
Query: 680 IAVGTPWFVRNVDLHDXLN 736
+ + R D+ N
Sbjct: 448 RIINASRYTRQADIRTKYN 466
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 60.1 bits (139), Expect = 4e-09
Identities = 47/199 (23%), Positives = 81/199 (40%), Gaps = 1/199 (0%)
Frame = +2
Query: 143 LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNT 322
LA +ADDT I + L Q +W +KW I IN K+ +LF +
Sbjct: 731 LATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTN 790
Query: 323 TLSIPLPTRRVNNPAPAVRPITMYDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAF 502
+ PL +N A K +YLG+ LD R+TF H+ ++ +
Sbjct: 791 IYTPPL----INGQRAAK------------LNKQRYLGLMLDRRLTFCAHMTLLKGKTIA 834
Query: 503 ILGRLYPMICRRSKMSLRNKMTLYKTCIRPVMTYASVVFAH-AXRIHLKSFQIIQSRFCR 679
+L +I + S + K+ L+K + P+ YA ++ K Q +++++ R
Sbjct: 835 AYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIR 894
Query: 680 IAVGTPWFVRNVDLHDXLN 736
+ + R D+ N
Sbjct: 895 RIINASRYTRQADIRTKYN 913
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 60.1 bits (139), Expect = 4e-09
Identities = 47/199 (23%), Positives = 81/199 (40%), Gaps = 1/199 (0%)
Frame = +2
Query: 143 LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNT 322
LA +ADDT I + L Q +W +KW I IN K+ +LF +
Sbjct: 731 LATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTN 790
Query: 323 TLSIPLPTRRVNNPAPAVRPITMYDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAF 502
+ PL +N A K +YLG+ LD R+TF H+ ++ +
Sbjct: 791 IYTPPL----INGQRAAK------------LNKQRYLGLMLDRRLTFCAHMTLLKGKTIA 834
Query: 503 ILGRLYPMICRRSKMSLRNKMTLYKTCIRPVMTYASVVFAH-AXRIHLKSFQIIQSRFCR 679
+L +I + S + K+ L+K + P+ YA ++ K Q +++++ R
Sbjct: 835 AYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIR 894
Query: 680 IAVGTPWFVRNVDLHDXLN 736
+ + R D+ N
Sbjct: 895 RIINASRYTRQADIRTKYN 913
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 60.1 bits (139), Expect = 4e-09
Identities = 47/199 (23%), Positives = 81/199 (40%), Gaps = 1/199 (0%)
Frame = +2
Query: 143 LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNT 322
LA +ADDT I + L Q +W +KW I IN K+ +LF +
Sbjct: 731 LATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTN 790
Query: 323 TLSIPLPTRRVNNPAPAVRPITMYDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAF 502
+ PL +N A K +YLG+ LD R+TF H+ ++ +
Sbjct: 791 IYTPPL----INGQRAAK------------LNKQRYLGLMLDRRLTFCAHMTLLKGKTIA 834
Query: 503 ILGRLYPMICRRSKMSLRNKMTLYKTCIRPVMTYASVVFAH-AXRIHLKSFQIIQSRFCR 679
+L +I + S + K+ L+K + P+ YA ++ K Q +++++ R
Sbjct: 835 AYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIR 894
Query: 680 IAVGTPWFVRNVDLHDXLN 736
+ + R D+ N
Sbjct: 895 RIINASRYTRQADIRTKYN 913
>U14102-1|AAC46495.1| 299|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 299
Score = 44.8 bits (101), Expect = 2e-04
Identities = 22/70 (31%), Positives = 37/70 (52%)
Frame = +2
Query: 398 QPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKMTLYK 577
Q I K YLGV LDS++T H+ + + ++ ++ RRSK+ + KM + K
Sbjct: 4 QVIKIESKQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILK 63
Query: 578 TCIRPVMTYA 607
+ + P+ YA
Sbjct: 64 SVLSPIWQYA 73
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 40.3 bits (90), Expect = 0.003
Identities = 23/85 (27%), Positives = 42/85 (49%)
Frame = +2
Query: 365 APAVRPITMYDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSK 544
AP VR + +P+ +YLG+T+ M F HI ++R R ++G L ++
Sbjct: 718 APTVR---FAGRNLPYVRSCRYLGITVSEGMKFLTHIASLRQRMTGVVGALARVLRADWG 774
Query: 545 MSLRNKMTLYKTCIRPVMTYASVVF 619
S R + T+Y + P + + + V+
Sbjct: 775 FSPRARRTIYDGLMAPCVLFGAPVW 799
>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
protein.
Length = 1286
Score = 34.3 bits (75), Expect = 0.22
Identities = 19/60 (31%), Positives = 25/60 (41%)
Frame = +3
Query: 246 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCTTSPYRGPRRS 425
S SG +T TPR S+ G TPR + + T P + CT+ P RS
Sbjct: 887 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSCPTTTTPRSTTTTCTSGPTTTTPRS 946
Score = 33.5 bits (73), Expect = 0.38
Identities = 22/68 (32%), Positives = 28/68 (41%)
Frame = +3
Query: 246 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCTTSPYRGPRRS 425
S S +T TPR S+ G TPR + + T P + CT SP RS
Sbjct: 471 STSRPTTTTPRSTTTTSTSGPTTTTPRSTTTTTTSGPTTTTPRSTTTTCTCSPTTTTPRS 530
Query: 426 NI*ASPST 449
+PST
Sbjct: 531 T--TTPST 536
Score = 31.1 bits (67), Expect = 2.0
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = +3
Query: 246 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCTTSPYRGPRRS 425
S SG +T TPR S+ G TPR + + T P + T+ P RS
Sbjct: 599 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS 658
Query: 426 NI*ASPS 446
S S
Sbjct: 659 TTTTSTS 665
Score = 31.1 bits (67), Expect = 2.0
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = +3
Query: 246 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCTTSPYRGPRRS 425
S SG +T TPR S+ G TPR + + T P + T+ P RS
Sbjct: 615 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS 674
Query: 426 NI*ASPS 446
S S
Sbjct: 675 TTTTSTS 681
Score = 31.1 bits (67), Expect = 2.0
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = +3
Query: 246 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCTTSPYRGPRRS 425
S SG +T TPR S+ G TPR + + T P + T+ P RS
Sbjct: 631 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS 690
Query: 426 NI*ASPS 446
S S
Sbjct: 691 TTTTSTS 697
Score = 31.1 bits (67), Expect = 2.0
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = +3
Query: 246 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCTTSPYRGPRRS 425
S SG +T TPR S+ G TPR + + T P + T+ P RS
Sbjct: 647 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS 706
Query: 426 NI*ASPS 446
S S
Sbjct: 707 TTTTSTS 713
Score = 31.1 bits (67), Expect = 2.0
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = +3
Query: 246 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCTTSPYRGPRRS 425
S SG +T TPR S+ G TPR + + T P + T+ P RS
Sbjct: 663 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS 722
Query: 426 NI*ASPS 446
S S
Sbjct: 723 TTTTSTS 729
Score = 31.1 bits (67), Expect = 2.0
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = +3
Query: 246 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCTTSPYRGPRRS 425
S SG +T TPR S+ G TPR + + T P + T+ P RS
Sbjct: 679 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS 738
Query: 426 NI*ASPS 446
S S
Sbjct: 739 TTTTSTS 745
Score = 31.1 bits (67), Expect = 2.0
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = +3
Query: 246 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCTTSPYRGPRRS 425
S SG +T TPR S+ G TPR + + T P + T+ P RS
Sbjct: 695 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS 754
Query: 426 NI*ASPS 446
S S
Sbjct: 755 TTTTSTS 761
Score = 31.1 bits (67), Expect = 2.0
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = +3
Query: 246 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCTTSPYRGPRRS 425
S SG +T TPR S+ G TPR + + T P + T+ P RS
Sbjct: 711 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS 770
Query: 426 NI*ASPS 446
S S
Sbjct: 771 TTTTSTS 777
Score = 31.1 bits (67), Expect = 2.0
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = +3
Query: 246 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCTTSPYRGPRRS 425
S SG +T TPR S+ G TPR + + T P + T+ P RS
Sbjct: 727 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS 786
Query: 426 NI*ASPS 446
S S
Sbjct: 787 TTTTSTS 793
Score = 31.1 bits (67), Expect = 2.0
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = +3
Query: 246 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCTTSPYRGPRRS 425
S SG +T TPR S+ G TPR + + T P + T+ P RS
Sbjct: 743 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS 802
Query: 426 NI*ASPS 446
S S
Sbjct: 803 TTTTSTS 809
Score = 31.1 bits (67), Expect = 2.0
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = +3
Query: 246 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCTTSPYRGPRRS 425
S SG +T TPR S+ G TPR + + T P + T+ P RS
Sbjct: 759 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS 818
Query: 426 NI*ASPS 446
S S
Sbjct: 819 TTTTSTS 825
Score = 31.1 bits (67), Expect = 2.0
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = +3
Query: 246 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCTTSPYRGPRRS 425
S SG +T TPR S+ G TPR + + T P + T+ P RS
Sbjct: 775 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS 834
Query: 426 NI*ASPS 446
S S
Sbjct: 835 TTTTSTS 841
Score = 31.1 bits (67), Expect = 2.0
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = +3
Query: 246 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCTTSPYRGPRRS 425
S SG +T TPR S+ G TPR + + T P + T+ P RS
Sbjct: 791 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS 850
Query: 426 NI*ASPS 446
S S
Sbjct: 851 TTTTSTS 857
Score = 31.1 bits (67), Expect = 2.0
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = +3
Query: 246 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCTTSPYRGPRRS 425
S SG +T TPR S+ G TPR + + T P + T+ P RS
Sbjct: 807 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS 866
Query: 426 NI*ASPS 446
S S
Sbjct: 867 TTTTSTS 873
Score = 31.1 bits (67), Expect = 2.0
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = +3
Query: 246 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCTTSPYRGPRRS 425
S SG +T TPR S+ G TPR + + T P + T+ P RS
Sbjct: 823 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS 882
Query: 426 NI*ASPS 446
S S
Sbjct: 883 TTTTSTS 889
Score = 31.1 bits (67), Expect = 2.0
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = +3
Query: 246 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCTTSPYRGPRRS 425
S SG +T TPR S+ G TPR + + T P + T+ P RS
Sbjct: 839 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS 898
Query: 426 NI*ASPS 446
S S
Sbjct: 899 TTTTSTS 905
Score = 31.1 bits (67), Expect = 2.0
Identities = 20/67 (29%), Positives = 26/67 (38%)
Frame = +3
Query: 246 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCTTSPYRGPRRS 425
S SG +T TPR S+ G TPR + + T P + T+ P RS
Sbjct: 855 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS 914
Query: 426 NI*ASPS 446
S S
Sbjct: 915 TTTTSTS 921
Score = 29.9 bits (64), Expect = 4.7
Identities = 18/60 (30%), Positives = 24/60 (40%)
Frame = +3
Query: 246 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCTTSPYRGPRRS 425
S SG +T TPR S+ G TPR + + T P + T+ P RS
Sbjct: 871 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSCPTTTTPRS 930
Score = 29.5 bits (63), Expect = 6.2
Identities = 18/60 (30%), Positives = 24/60 (40%)
Frame = +3
Query: 246 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCTTSPYRGPRRS 425
S SG +T TPR S+ TPR + + T P + CT+ P RS
Sbjct: 903 STSGPTTTTPRSTTTTSTSCPTTTTPRSTTTTCTSGPTTTTPRSTTTTCTSCPTTTTPRS 962
>BT003186-1|AAO24941.1| 756|Drosophila melanogaster RE65015p
protein.
Length = 756
Score = 31.5 bits (68), Expect = 1.5
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +3
Query: 348 GASITPPPPFAQSRCTTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYAIVP 497
GAS PPPP Q T +P G R ++ SP+T +PT +R+ P
Sbjct: 121 GASAAPPPPPPQQPSTLAPPTG--RLSVPGSPATA--RKSPTPQRFEPPP 166
>AY119084-1|AAM50944.1| 543|Drosophila melanogaster LP10938p
protein.
Length = 543
Score = 31.5 bits (68), Expect = 1.5
Identities = 17/29 (58%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -1
Query: 595 DGAYASFVECHLISKG-HFTSPTYHRVET 512
DG Y FVE LI G HF SPTY ET
Sbjct: 366 DGGYFLFVEGGLIDYGNHFNSPTYSLSET 394
>AY069838-1|AAL39983.1| 555|Drosophila melanogaster SD08447p
protein.
Length = 555
Score = 31.5 bits (68), Expect = 1.5
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 187 EEGVASSTTSDRSYHHGTVVPEVAHRH*PHEKH 285
EEGV+ T S +HH + H H PH H
Sbjct: 203 EEGVSDDTVSQHHHHHHHGHHQQEHHHQPHHHH 235
>AE014298-1054|AAF46269.1| 555|Drosophila melanogaster CG12155-PA
protein.
Length = 555
Score = 31.5 bits (68), Expect = 1.5
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 187 EEGVASSTTSDRSYHHGTVVPEVAHRH*PHEKH 285
EEGV+ T S +HH + H H PH H
Sbjct: 203 EEGVSDDTVSQHHHHHHHGHHQQEHHHQPHHHH 235
>AE013599-3359|AAF46819.1| 543|Drosophila melanogaster CG3292-PA
protein.
Length = 543
Score = 31.5 bits (68), Expect = 1.5
Identities = 17/29 (58%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -1
Query: 595 DGAYASFVECHLISKG-HFTSPTYHRVET 512
DG Y FVE LI G HF SPTY ET
Sbjct: 366 DGGYFLFVEGGLIDYGNHFNSPTYSLSET 394
>BT012324-1|AAS77449.1| 381|Drosophila melanogaster AT25482p
protein.
Length = 381
Score = 31.1 bits (67), Expect = 2.0
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Frame = +3
Query: 177 TRVGRRRCFI--DDFRPQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTP---R*ASLS 341
TR RR + D RP P D+ + G ++ + R +S + +RTP R ASL+
Sbjct: 4 TRARTRRLSLLETDSRPSTPQLDTVAELGTASPRATRRTRLNSSTLDVRTPTRTRRASLA 63
Query: 342 RLGASITPPPPFAQSRCTTSPYRGPR 419
R G + P P + R +P + R
Sbjct: 64 R-GETPEPTTPSSVKRTARTPAKNTR 88
>BT011556-1|AAS15692.1| 293|Drosophila melanogaster AT30717p
protein.
Length = 293
Score = 31.1 bits (67), Expect = 2.0
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = +3
Query: 261 STLTPR---KAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRC 392
S+L PR KA + LRTPR +TPPPP RC
Sbjct: 83 SSLAPRPAPKAFKMRKTDTHLRTPRVVQCKTARIPVTPPPPPPSPRC 129
>AY075365-1|AAR82806.1| 301|Drosophila melanogaster GM08848p
protein.
Length = 301
Score = 31.1 bits (67), Expect = 2.0
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Frame = +3
Query: 177 TRVGRRRCFI--DDFRPQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTP---R*ASLS 341
TR RR + D RP P D+ + G ++ + R +S + +RTP R ASL+
Sbjct: 14 TRARTRRLSLLETDSRPSTPQLDTVAELGTASPRATRRTRLNSSTLDVRTPTRTRRASLA 73
Query: 342 RLGASITPPPPFAQSRCTTSPYRGPR 419
R G + P P + R +P + R
Sbjct: 74 R-GETPEPTTPSSVKRTARTPAKNTR 98
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 31.1 bits (67), Expect = 2.0
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +2
Query: 413 APKVKYLGVTLDSRMTFRPHIKTVRDRAAF---ILGRLYPMI 529
A +KYLGV +D R++F+ H + +AA L R+ P +
Sbjct: 714 AETLKYLGVLIDRRLSFKAHARYASKKAAMTAAALARIMPNV 755
>AE014298-807|AAF46093.1| 293|Drosophila melanogaster CG15764-PA
protein.
Length = 293
Score = 31.1 bits (67), Expect = 2.0
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = +3
Query: 261 STLTPR---KAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRC 392
S+L PR KA + LRTPR +TPPPP RC
Sbjct: 83 SSLAPRPAPKAFKMRKTDTHLRTPRVVQCKTARIPVTPPPPPPSPRC 129
>AE014297-1138|AAN13466.1| 1420|Drosophila melanogaster CG12819-PA,
isoform A protein.
Length = 1420
Score = 31.1 bits (67), Expect = 2.0
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Frame = +3
Query: 177 TRVGRRRCFI--DDFRPQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTP---R*ASLS 341
TR RR + D RP P D+ + G ++ + R +S + +RTP R ASL+
Sbjct: 4 TRARTRRLSLLETDSRPSTPQLDTVAELGTASPRATRRTRLNSSTLDVRTPTRTRRASLA 63
Query: 342 RLGASITPPPPFAQSRCTTSPYRGPR 419
R G + P P + R +P + R
Sbjct: 64 R-GETPEPTTPSSVKRTARTPAKNTR 88
>AE014297-1137|AAF54522.2| 1430|Drosophila melanogaster CG12819-PB,
isoform B protein.
Length = 1430
Score = 31.1 bits (67), Expect = 2.0
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Frame = +3
Query: 177 TRVGRRRCFI--DDFRPQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTP---R*ASLS 341
TR RR + D RP P D+ + G ++ + R +S + +RTP R ASL+
Sbjct: 14 TRARTRRLSLLETDSRPSTPQLDTVAELGTASPRATRRTRLNSSTLDVRTPTRTRRASLA 73
Query: 342 RLGASITPPPPFAQSRCTTSPYRGPR 419
R G + P P + R +P + R
Sbjct: 74 R-GETPEPTTPSSVKRTARTPAKNTR 98
>BT010037-1|AAQ22506.1| 409|Drosophila melanogaster LD43171p
protein.
Length = 409
Score = 30.7 bits (66), Expect = 2.7
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +2
Query: 305 GRPPNTTLSIPLPTRRVNNPAPAVRPITMYDQPIPWAPK 421
G P T S P P V APA PI+ P+ +AP+
Sbjct: 280 GPAPAVTYSAPAPVPVVRYSAPAPAPISYAPAPVSYAPQ 318
Score = 29.5 bits (63), Expect = 6.2
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +2
Query: 314 PNTTLSIPLPTRRVNNPAPAVRPITMYDQPIPWAPKVK 427
P T S P P V APA P Y P P AP V+
Sbjct: 215 PAVTYSAPAPAPAVTYSAPAPAPAVTYSAPAP-APVVR 251
>AE014298-2534|AAN09435.1| 409|Drosophila melanogaster CG32564-PA
protein.
Length = 409
Score = 30.7 bits (66), Expect = 2.7
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +2
Query: 305 GRPPNTTLSIPLPTRRVNNPAPAVRPITMYDQPIPWAPK 421
G P T S P P V APA PI+ P+ +AP+
Sbjct: 280 GPAPAVTYSAPAPVPVVRYSAPAPAPISYAPAPVSYAPQ 318
Score = 29.5 bits (63), Expect = 6.2
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +2
Query: 314 PNTTLSIPLPTRRVNNPAPAVRPITMYDQPIPWAPKVK 427
P T S P P V APA P Y P P AP V+
Sbjct: 215 PAVTYSAPAPAPAVTYSAPAPAPAVTYSAPAP-APVVR 251
>AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein.
Length = 433
Score = 30.3 bits (65), Expect = 3.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 269 NPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAP 370
N + ++ +L K+ R PNT + LPT PAP
Sbjct: 301 NQSTASVMLVKKSRNPNTITNTDLPTSSTKVPAP 334
>BT004847-1|AAO45203.1| 955|Drosophila melanogaster RE70412p
protein.
Length = 955
Score = 29.9 bits (64), Expect = 4.7
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +3
Query: 321 PR*ASLSRLGASITPPPPFAQSRCTTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYAIVPP 500
P AS + +S+ PPPF +++ R P R + + S +G S T Y + P
Sbjct: 564 PTAASTIPVPSSVATPPPFRPKVVSSTTSRTPYRPAVSTASSGIGGSSTSTVGTYPSLSP 623
Query: 501 SS*DVS 518
+ +++
Sbjct: 624 TQVEIN 629
>AY128472-1|AAM75065.1| 836|Drosophila melanogaster RE28238p
protein.
Length = 836
Score = 29.9 bits (64), Expect = 4.7
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +3
Query: 348 GASITPPPPFAQSRCTTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYAIVP 497
GAS PPPP Q T +P G R + SP+T +PT +R+ P
Sbjct: 198 GASAAPPPPPPQQPSTLAPPTG--RLSAPGSPATA--RKSPTPQRFEPPP 243
>AE014298-2109|AAF48429.2| 955|Drosophila melanogaster CG9095-PA
protein.
Length = 955
Score = 29.9 bits (64), Expect = 4.7
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +3
Query: 321 PR*ASLSRLGASITPPPPFAQSRCTTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYAIVPP 500
P AS + +S+ PPPF +++ R P R + + S +G S T Y + P
Sbjct: 564 PTAASTIPVPSSVATPPPFRPKVVSSTTSRTPYRPAVSTASSGIGGSSTSTVGTYPSLSP 623
Query: 501 SS*DVS 518
+ +++
Sbjct: 624 TQVEIN 629
>AE014134-2320|AAN10833.1| 836|Drosophila melanogaster CG6043-PC,
isoform C protein.
Length = 836
Score = 29.9 bits (64), Expect = 4.7
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +3
Query: 348 GASITPPPPFAQSRCTTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYAIVP 497
GAS PPPP Q T +P G R + SP+T +PT +R+ P
Sbjct: 198 GASAAPPPPPPQQPSTLAPPTG--RLSAPGSPATA--RKSPTPQRFEPPP 243
>AE014134-2318|AAN10831.1| 759|Drosophila melanogaster CG6043-PB,
isoform B protein.
Length = 759
Score = 29.9 bits (64), Expect = 4.7
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +3
Query: 348 GASITPPPPFAQSRCTTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYAIVP 497
GAS PPPP Q T +P G R + SP+T +PT +R+ P
Sbjct: 121 GASAAPPPPPPQQPSTLAPPTG--RLSAPGSPATA--RKSPTPQRFEPPP 166
>AE014134-2317|AAF53274.2| 759|Drosophila melanogaster CG6043-PA,
isoform A protein.
Length = 759
Score = 29.9 bits (64), Expect = 4.7
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +3
Query: 348 GASITPPPPFAQSRCTTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYAIVP 497
GAS PPPP Q T +P G R + SP+T +PT +R+ P
Sbjct: 121 GASAAPPPPPPQQPSTLAPPTG--RLSAPGSPATA--RKSPTPQRFEPPP 166
>AE014134-2316|AAN10830.1| 918|Drosophila melanogaster CG6043-PD,
isoform D protein.
Length = 918
Score = 29.9 bits (64), Expect = 4.7
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +3
Query: 348 GASITPPPPFAQSRCTTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYAIVP 497
GAS PPPP Q T +P G R + SP+T +PT +R+ P
Sbjct: 121 GASAAPPPPPPQQPSTLAPPTG--RLSAPGSPATA--RKSPTPQRFEPPP 166
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 29.5 bits (63), Expect = 6.2
Identities = 19/96 (19%), Positives = 41/96 (42%)
Frame = +2
Query: 404 IPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKMTLYKTC 583
IP +K LG+TL+++ + HI + + L + + + + + + K
Sbjct: 731 IPSVTSLKILGITLNNKYKWNTHINLLLPKLHNKLNIIKCLSSLKFNCNTHTLLNVAKAT 790
Query: 584 IRPVMTYASVVFAHAXRIHLKSFQIIQSRFCRIAVG 691
I + Y ++ HA + L + + R+A+G
Sbjct: 791 IIAKLEYGLFLYGHAPKSILNKIKTPFNSAIRLALG 826
>AY071124-1|AAL48746.1| 420|Drosophila melanogaster RE17165p
protein.
Length = 420
Score = 29.1 bits (62), Expect = 8.2
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = +2
Query: 308 RPPNTTLSIPLPTRRVNNPAPAVRPITMYDQPIPWAPKVKYLGVTLDSR 454
RPP P PT + P+P P Y QP P AP G T R
Sbjct: 331 RPPAPPAPAPGPTYQPRPPSPPAPPAPTY-QPQPPAPPAPAPGPTYQPR 378
>AE014296-2897|AAF49349.4| 926|Drosophila melanogaster CG13731-PA
protein.
Length = 926
Score = 29.1 bits (62), Expect = 8.2
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 308 RPPNTTLSIPLPTRRVNNPAPAVRPITMYDQPIP 409
RPP + P TRR+ PAP P T ++P+P
Sbjct: 459 RPPTRPPTYPPTTRRLTTPAPTYLPPT--NKPLP 490
Score = 29.1 bits (62), Expect = 8.2
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 308 RPPNTTLSIPLPTRRVNNPAPAVRPITMYDQPIP 409
RPP + P TRR+ PAP P T ++P+P
Sbjct: 670 RPPTRPPTYPPTTRRLTTPAPTYLPPT--NKPLP 701
Score = 29.1 bits (62), Expect = 8.2
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 308 RPPNTTLSIPLPTRRVNNPAPAVRPITMYDQPIP 409
RPP + P TRR+ PAP P T ++P+P
Sbjct: 773 RPPTRPPTYPPTTRRLTTPAPTYLPPT--NKPLP 804
>AE014296-850|AAF47902.2| 420|Drosophila melanogaster CG15021-PA
protein.
Length = 420
Score = 29.1 bits (62), Expect = 8.2
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = +2
Query: 308 RPPNTTLSIPLPTRRVNNPAPAVRPITMYDQPIPWAPKVKYLGVTLDSR 454
RPP P PT + P+P P Y QP P AP G T R
Sbjct: 331 RPPAPPAPAPGPTYQPRPPSPPAPPAPTY-QPQPPAPPAPAPGPTYQPR 378
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,266,265
Number of Sequences: 53049
Number of extensions: 959551
Number of successful extensions: 3196
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 2765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3161
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4147514904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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