Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_FL5_K02
(862 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 43 3e-04
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 39 0.005
AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical ... 38 0.007
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 34 0.15
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 33 0.26
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 32 0.46
U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical pr... 31 1.4
AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical... 30 1.8
U53180-1|AAK68285.1| 492|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 29 5.6
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 29 5.6
Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical pr... 28 7.4
AF039051-4|AAB94264.1| 539|Caenorhabditis elegans Hypothetical ... 28 7.4
AC024812-3|AAF59551.1| 183|Caenorhabditis elegans Hypothetical ... 28 7.4
AF047659-9|AAC04421.1| 254|Caenorhabditis elegans Hypothetical ... 28 9.8
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 42.7 bits (96), Expect = 3e-04
Identities = 51/208 (24%), Positives = 87/208 (41%), Gaps = 1/208 (0%)
Frame = +2
Query: 59 PESARLRPLPX-YYSVCISTIYPGSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTM 235
P+ A L PL Y IS+I P + FADDT +Y S K LQ+A +
Sbjct: 78 PQGAVLSPLLFGIYVNDISSILP--EKVACKQFADDTKLYASTPKTES-ENNLQSALDAV 134
Query: 236 GQWFRKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMYDQPIPWA 415
W + ++ +N +K T+ + + RR++ + PI
Sbjct: 135 VDWTKGSKLTLNQSK--------------TVHVTVGKRRIDFK------YHLDGYPIERK 174
Query: 416 PKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKMTLYKTCIRPV 595
+ LG + ++ F H + + A F L ++ +K + + LYKT IRP
Sbjct: 175 AITRDLGFLISEKLDFSDHWRKCINLAKFQLANMFNKYSTSNKKLM---ILLYKTFIRPR 231
Query: 596 MTYASVVFAHAXRIHLKSFQIIQSRFCR 679
+ Y +VV + + K+ + +Q+ F R
Sbjct: 232 LEYGTVVSSPTKKSDEKTIESVQNAFTR 259
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 38.7 bits (86), Expect = 0.005
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Frame = +2
Query: 380 PITMYD-QPIPWAPK--VKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMS 550
P T+Y +P +P + LG+ DS++TF+PHIK + + L R ++ +
Sbjct: 178 PKTVYKINNLPISPSNIARDLGILTDSKLTFKPHIKKI---VSLALLRCKQLLKSFKSLC 234
Query: 551 LRNKMTLYKTCIRPVMTYASVVFA 622
L+KT I P++ Y S V++
Sbjct: 235 PEFYCNLFKTYILPLIEYGSAVYS 258
>AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical
protein K09H9.4 protein.
Length = 328
Score = 38.3 bits (85), Expect = 0.007
Identities = 25/93 (26%), Positives = 43/93 (46%)
Frame = +2
Query: 401 PIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKMTLYKT 580
PI + LG + ++ F H K + A F L ++ +K + + LYKT
Sbjct: 140 PIERKTITRDLGFLISEKLDFSEHWKKSINLAKFQLANIFNQYSTSNKKLM---ILLYKT 196
Query: 581 CIRPVMTYASVVFAHAXRIHLKSFQIIQSRFCR 679
IRP + Y +VV + + K+ + +Q+ F R
Sbjct: 197 FIRPRLEYGTVVSSPTKKSDEKAIESVQNAFTR 229
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 33.9 bits (74), Expect = 0.15
Identities = 23/74 (31%), Positives = 36/74 (48%)
Frame = +2
Query: 401 PIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKMTLYKT 580
PI + V+ LG+ D ++ F HI V + + R ++ S S + LYKT
Sbjct: 969 PITPSSTVRDLGLITDCKLKFEHHIVKV---SCLAMLRSKQILKAFSSNSPKFYAHLYKT 1025
Query: 581 CIRPVMTYASVVFA 622
+ P+M Y S V+A
Sbjct: 1026 YVAPIMNYCSEVYA 1039
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 33.1 bits (72), Expect = 0.26
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +2
Query: 281 STAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMYDQPIPWAP 418
ST + PP T P P R+ NP+P+ +P + P P P
Sbjct: 449 STGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 494
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 32.3 bits (70), Expect = 0.46
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +2
Query: 281 STAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMYDQPIPWAP 418
ST + PP T P P R+ NP+P+ +P + P P P
Sbjct: 456 STGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 501
>U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical protein
M02E1.1a protein.
Length = 1077
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +2
Query: 326 LSIPLPTRRVNNPAPAVRPITMYDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRA 496
++ PLP+ P VRP T +D IP+ ++G + T + R RA
Sbjct: 890 MATPLPSFN-GRPPSVVRPRTAFDMNIPYGTDSNFIGAKQFKKNTLSVEMTNARQRA 945
>AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical
protein Y75B8A.13 protein.
Length = 1420
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 299 KRGRPPNTTLSIPLPTRRVNNPAPAVRPITMYDQPIPWAP 418
K +PP + +PLP RR + P V P + P P P
Sbjct: 233 KTTKPPQHLIILPLPPRRASPAPPRVIPHVIMQPPRPRPP 272
>U53180-1|AAK68285.1| 492|Caenorhabditis elegans Hypothetical
protein D1014.7 protein.
Length = 492
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 44 PXTSQPESARLRPLPXYYSVCISTIYPGSPE 136
P S P RL P Y++VC++T+Y P+
Sbjct: 187 PEYSVPIVPRLNKPPHYFTVCMATLYGDEPK 217
>Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical
protein B0240.4 protein.
Length = 588
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 341 PTRRVNNPAPAVRPITMYDQPIPW 412
P R V++P +PIT++DQ + W
Sbjct: 46 PNRTVSSPRVQQKPITIFDQIVDW 69
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
K04H4.1b protein.
Length = 1502
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 700 PRGSDGYPAKTGLNNLKG 647
PRG DG+P + GL+ L G
Sbjct: 1153 PRGDDGFPGRDGLDGLPG 1170
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 700 PRGSDGYPAKTGLNNLKG 647
PRG DG+P + GL+ L G
Sbjct: 1410 PRGDDGFPGRDGLDGLPG 1427
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 700 PRGSDGYPAKTGLNNLKG 647
PRG DG+P + GL+ L G
Sbjct: 1409 PRGDDGFPGRDGLDGLPG 1426
>Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical
protein F56H6.11 protein.
Length = 663
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -2
Query: 357 LTRLVGRGMLSVVFGGRPLLKSTAVLFVGLMSMRHFRNHCPM 232
LT VG G+L ++ PLL + + ++G +S + H P+
Sbjct: 275 LTATVGTGLLMLLSENNPLLSNKVLTYIGDISYSLYLVHWPI 316
>AF039051-4|AAB94264.1| 539|Caenorhabditis elegans Hypothetical
protein C14C6.6 protein.
Length = 539
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 44 PXTSQPESARLRPLPXYYSVCISTIYPGSPE 136
P S P R+ P Y++VC++T+Y P+
Sbjct: 213 PEFSVPIIPRIEKPPHYFTVCMATLYGQEPK 243
>AC024812-3|AAF59551.1| 183|Caenorhabditis elegans Hypothetical
protein Y54E10BR.5 protein.
Length = 183
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -2
Query: 387 VIGRTAGAGLLTRLVGRGMLSVVFGGRPLLKSTAVLFVGLMSMRHFRN 244
V+GRT G LL + GM++++ P LK + F+GL + H N
Sbjct: 141 VVGRTKG--LLPYV---GMVTIIMNDYPKLKYAVLAFLGLFVLLHKEN 183
>AF047659-9|AAC04421.1| 254|Caenorhabditis elegans Hypothetical
protein K07H8.9 protein.
Length = 254
Score = 27.9 bits (59), Expect = 9.8
Identities = 21/77 (27%), Positives = 30/77 (38%)
Frame = -1
Query: 541 TSPTYHRVETS*DEGGTIAYRLDVGAECHPTVEGDA*IFDLRGPRYGLVVHRDWANGGGG 362
T PTY+ + GT A +L+ C + G+ YG +H+ +G
Sbjct: 131 TYPTYNFIGRIIGPRGTTAKQLEKDTGCRIMIRGNH-----SNKMYGNALHKTHGDGSQD 185
Query: 361 VIDAPSRERDAQRGVRR 311
ID P R G RR
Sbjct: 186 AIDLPLRVIVETSGPRR 202
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,986,123
Number of Sequences: 27780
Number of extensions: 437348
Number of successful extensions: 1511
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1510
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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