Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_FL5_J15
(872 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 48 9e-08
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 46 3e-07
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 44 1e-06
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 42 7e-06
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 42 7e-06
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 42 1e-05
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 41 2e-05
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 41 2e-05
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 40 2e-05
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 40 2e-05
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 40 2e-05
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 40 4e-05
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 40 4e-05
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 39 5e-05
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 39 5e-05
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 38 1e-04
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 38 1e-04
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 37 3e-04
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 36 4e-04
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 35 9e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 34 0.001
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 33 0.005
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 33 0.005
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 33 0.005
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 33 0.005
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 32 0.008
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 32 0.008
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 32 0.008
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 31 0.014
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 31 0.018
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 26 0.52
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 4.9
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 4.9
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 4.9
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 4.9
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 48.4 bits (110), Expect = 9e-08
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Frame = +3
Query: 288 VSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS*IKRLDISTPISMQLDNWPN 458
V S+ +W PD+ + N+ T G V ++GSVS + + + +WP
Sbjct: 119 VKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPY 178
Query: 459 DMQTCTFXFGSRMHNSDEMDFVIDKRIYSM 548
D C FGS +H+ +E++ +DK+ + M
Sbjct: 179 DTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 46.4 bits (105), Expect = 3e-07
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Frame = +3
Query: 297 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVS*IKRLDISTPISMQLDNWPNDM 464
+++W+PD+VL N A G+Y +R + + NG V + + ++ + +P D
Sbjct: 106 DKVWKPDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQ 162
Query: 465 QTCTFXFGSRMHNSDEMDFVI--DKRIYSM---FESGAWDV 572
QTC FGS N D++ + +K + ++SG WD+
Sbjct: 163 QTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDI 203
Score = 23.4 bits (48), Expect = 2.8
Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 137 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGRVG 271
K+ VN L ++ N+ E ++ L+ W D +L W+ G
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYG 96
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 44.4 bits (100), Expect = 1e-06
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
Frame = +3
Query: 288 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVS*IKRLDISTPISMQLDNWPNDM 464
+ RLW+PDV++ N+A G Y V NNG+ + + + + +P D
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 465 QTCTFXFGSRMHNSDEMDFVIDKR----IYSMFESGAWDV 572
Q C FGS ++ ++D + I S +G WD+
Sbjct: 160 QRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNGEWDL 199
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 41.9 bits (94), Expect = 7e-06
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +3
Query: 288 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVS*IKRLDISTPISMQLDNWPNDM 464
++ +LW+PD+++ N+A G Y V++NGS + + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 465 QTCTFXFGSRMHNSDEMDFVI 527
Q C FGS ++ +++D V+
Sbjct: 191 QHCDMKFGSWTYDGNQVDLVL 211
Score = 26.2 bits (55), Expect = 0.39
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 176 NIRESESTVRIQADLQMNWIDKRLSWNAGRVG 271
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 41.9 bits (94), Expect = 7e-06
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +3
Query: 288 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVS*IKRLDISTPISMQLDNWPNDM 464
++ +LW+PD+++ N+A G Y V++NGS + + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 465 QTCTFXFGSRMHNSDEMDFVI 527
Q C FGS ++ +++D V+
Sbjct: 191 QHCDMKFGSWTYDGNQVDLVL 211
Score = 26.2 bits (55), Expect = 0.39
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 176 NIRESESTVRIQADLQMNWIDKRLSWNAGRVG 271
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 41.5 bits (93), Expect = 1e-05
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +3
Query: 288 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVS*IKRLDISTPISMQLDNWPNDM 464
++ +LW+PD+++ N+A G Y V++NGS + + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 465 QTCTFXFGSRMHNSDEMDFVI 527
Q C FGS ++ +++D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 26.2 bits (55), Expect = 0.39
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 176 NIRESESTVRIQADLQMNWIDKRLSWNAGRVG 271
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 40.7 bits (91), Expect = 2e-05
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +3
Query: 288 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVS*IKRLDISTPISMQLDNWPNDM 464
++ +LW+PD+++ N+A G Y V+++GS + + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDD 122
Query: 465 QTCTFXFGSRMHNSDEMDFVI 527
Q C FGS ++ +++D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 26.2 bits (55), Expect = 0.39
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 176 NIRESESTVRIQADLQMNWIDKRLSWNAGRVG 271
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 40.7 bits (91), Expect = 2e-05
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +3
Query: 297 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVS*IKRLDISTPISMQLDNWPNDMQ 467
ER+WRPD N + + R+S +G + RL I M+L N+P D Q
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQ 174
Query: 468 TCTFXFGS 491
+C GS
Sbjct: 175 SCPLILGS 182
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 40.3 bits (90), Expect = 2e-05
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +3
Query: 288 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVS*IKRLDISTPISMQLDNWPNDM 464
++ +LW+PD+++ N+A G Y V+++GS + + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDD 122
Query: 465 QTCTFXFGSRMHNSDEMDFVI 527
Q C FGS ++ +++D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 26.2 bits (55), Expect = 0.39
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 176 NIRESESTVRIQADLQMNWIDKRLSWNAGRVG 271
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 40.3 bits (90), Expect = 2e-05
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +3
Query: 288 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVS*IKRLDISTPISMQLDNWPNDM 464
V S+ +WRPD+VL NA A +A + + G V + + ++ +P D
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDE 164
Query: 465 QTCTFXFGSRMHNSDEMD 518
QTC FGS ++ ++D
Sbjct: 165 QTCVLKFGSWTYDGFKVD 182
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 40.3 bits (90), Expect = 2e-05
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +3
Query: 288 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVS*IKRLDISTPISMQLDNWPNDM 464
V S+ +WRPD+VL NA A +A ++ G V + + ++ +P D
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDE 160
Query: 465 QTCTFXFGSRMHNSDEMD 518
QTC FGS ++ ++D
Sbjct: 161 QTCVMKFGSWTYDGFQVD 178
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 39.5 bits (88), Expect = 4e-05
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +3
Query: 288 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVS*IKRLDISTPISMQLDNWPNDM 464
++ +LW+PD+++ N+A G Y V+++GS + + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 465 QTCTFXFGSRMHNSDEMDFVI 527
Q C FGS ++ +++D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 26.2 bits (55), Expect = 0.39
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 176 NIRESESTVRIQADLQMNWIDKRLSWNAGRVG 271
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 39.5 bits (88), Expect = 4e-05
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +3
Query: 270 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVS*IKRLDISTPISM 437
G V SE +W PD+VL N A G+Y + +A + G VS + +
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPPAIYKSSCEI 160
Query: 438 QLDNWPNDMQTCTFXFGSRMHNSDEMD 518
++ +P D Q+C FGS +N ++D
Sbjct: 161 NVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 39.1 bits (87), Expect = 5e-05
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +3
Query: 288 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVS*IKRLDISTPISMQLDNWPNDM 464
++ +LW+PD+++ N+A G Y V+++GS + + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDD 122
Query: 465 QTCTFXFGSRMHNSDEMDFVI 527
Q C FGS ++ +++D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 26.2 bits (55), Expect = 0.39
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 176 NIRESESTVRIQADLQMNWIDKRLSWNAGRVG 271
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 39.1 bits (87), Expect = 5e-05
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +3
Query: 288 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVS*IKRLDISTPISMQLDNWPNDM 464
++ +LW+PD+++ N+A G Y V+++GS + + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDD 122
Query: 465 QTCTFXFGSRMHNSDEMDFVI 527
Q C FGS ++ +++D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 26.2 bits (55), Expect = 0.39
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 176 NIRESESTVRIQADLQMNWIDKRLSWNAGRVG 271
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 37.9 bits (84), Expect = 1e-04
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Frame = +3
Query: 288 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVS*IKRLDISTPISMQLDNWP 455
V S+ +WRPD+VL N A G+Y + +A V +G V + S+ ++ +P
Sbjct: 105 VPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFP 161
Query: 456 NDMQTCTFXFGSRMHNSDEMD 518
D+QTC GS ++ ++D
Sbjct: 162 YDVQTCVLKLGSWTYDGFKVD 182
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 37.9 bits (84), Expect = 1e-04
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +3
Query: 264 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVS*IKRLDISTPISM 437
E+G T L V SE +W PD+VL N A G + +A + G V + +
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEI 147
Query: 438 QLDNWPNDMQTCTFXFGSRMHNSDEMD 518
+ +P D QTC FGS ++ ++D
Sbjct: 148 DVRYFPFDQQTCFMKFGSWTYDGIQID 174
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 36.7 bits (81), Expect = 3e-04
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +3
Query: 300 RLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVS*IKRLDISTPISMQLDNWPNDMQT 470
R+W+PD N + T R+ +G V RL I M L+N+P D Q
Sbjct: 84 RIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQR 143
Query: 471 CTFXFGS 491
C FGS
Sbjct: 144 CPLQFGS 150
Score = 35.1 bits (77), Expect = 9e-04
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = +2
Query: 65 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 232
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 233 IDKRLSWNAGR 265
+D+RL++ G+
Sbjct: 62 VDRRLAFQGGK 72
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 36.3 bits (80), Expect = 4e-04
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +2
Query: 59 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 223
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 224 MNWIDKRLSWNA 259
+ W L+W +
Sbjct: 88 LMWEQSHLTWKS 99
Score = 30.7 bits (66), Expect = 0.018
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Frame = +3
Query: 288 VSSERLWRPDVVLLNAAATTAGDY---ALRARVSNNGSVS*IKRLDISTPISMQLDN--W 452
V S +W PD+V+ ++ + D ++ V N+G++ + TP+ + D+ W
Sbjct: 110 VKSYEIWVPDIVM-HSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPVC-EYDHTWW 166
Query: 453 PNDMQTCTFXFGSRMHNSDEM 515
P D+ CT S H S+E+
Sbjct: 167 PYDILNCTIHIASWSHGSNEI 187
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 35.1 bits (77), Expect = 9e-04
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +3
Query: 270 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVS*IKRLDISTPISM 437
G T V SE +W PD+VL N A G+Y + +A + + G V + +
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEI 147
Query: 438 QLDNWPNDMQTCTFXFGSRMHNSDEMD 518
++ +P D QTC FGS ++ +D
Sbjct: 148 DVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 34.3 bits (75), Expect = 0.001
Identities = 16/77 (20%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +3
Query: 303 LWRPDVVLLNAAATTAGDYALRAR---VSNNGSVS*IKRLDISTPISMQLDNWPNDMQTC 473
+WRPD NA T + ++ + ++ ++ + +L + +M+ +++P+D Q C
Sbjct: 87 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQIC 146
Query: 474 TFXFGSRMHNSDEMDFV 524
+ S H + ++ F+
Sbjct: 147 SMMIESLSHTTQDLVFI 163
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 32.7 bits (71), Expect = 0.005
Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Frame = +3
Query: 297 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVS*IKRLDISTPISMQLDNWPNDMQ 467
+ +WRPD NA + T + + + ++ + +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 468 TCTFXFGSRMHNSDEMDFVID 530
C S H +DEM F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 32.7 bits (71), Expect = 0.005
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +3
Query: 285 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVS*IKRLDISTPISMQLDNWP 455
L + R+W PD+ N + + R+ NGSV R+ ++ M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 456 NDMQTCTFXFGSRMHNSDEMDFV 524
D Q C+ S +D++ F+
Sbjct: 169 LDRQVCSLRMASYGWTTDDLVFL 191
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 32.7 bits (71), Expect = 0.005
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +3
Query: 285 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVS*IKRLDISTPISMQLDNWP 455
L + R+W PD+ N + + R+ NGSV R+ ++ M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 456 NDMQTCTFXFGSRMHNSDEMDFV 524
D Q C+ S +D++ F+
Sbjct: 169 LDRQVCSLRMASYGWTTDDLVFL 191
Score = 27.9 bits (59), Expect = 0.13
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Frame = +2
Query: 86 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 244
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 245 LSWN 256
L +N
Sbjct: 95 LRFN 98
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 32.7 bits (71), Expect = 0.005
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = +3
Query: 294 SERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVS*IKRLDISTPISMQLDNWPNDM 464
+E++W PD N + D R R+S +GSV+ R + M L +P D
Sbjct: 113 AEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDS 172
Query: 465 QTCT 476
Q CT
Sbjct: 173 QNCT 176
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 31.9 bits (69), Expect = 0.008
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Frame = +3
Query: 270 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVS*IKRLDIS 422
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 423 TPISMQLDNWPNDMQTC 473
M L +P D Q C
Sbjct: 136 ASCPMNLQYFPMDRQLC 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 31.9 bits (69), Expect = 0.008
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Frame = +3
Query: 270 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVS*IKRLDIS 422
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 423 TPISMQLDNWPNDMQTC 473
M L +P D Q C
Sbjct: 136 ASCPMNLQYFPMDRQLC 152
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 31.9 bits (69), Expect = 0.008
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Frame = +3
Query: 270 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVS*IKRLDIS 422
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 18 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 74
Query: 423 TPISMQLDNWPNDMQTC 473
M L +P D Q C
Sbjct: 75 ASCPMNLQYFPMDRQLC 91
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 31.1 bits (67), Expect = 0.014
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +3
Query: 303 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVS*IKRLDISTPISMQLDNWPNDMQTC 473
+W P V + N ++A T + + + +G V RL + ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 474 TFXFGSRMHNSDEM 515
F S HN +M
Sbjct: 157 PLIFESWTHNVLDM 170
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 30.7 bits (66), Expect = 0.018
Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Frame = +3
Query: 288 VSSERLWRPDVVLLNAAATTAGDYALRAR--VSNNGSVS*IKRLDISTPISMQLDNWPND 461
V R+WRPD +L N A + VS+ G V + + + ++ +P D
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFD 141
Query: 462 MQTCTFXFGSRMHNSDEMD 518
Q C + S ++ +++
Sbjct: 142 EQRCVLKWASWTYDGYQLE 160
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 25.8 bits (54), Expect = 0.52
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Frame = +3
Query: 297 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVS*IKRLDISTPISMQLDNWPND 461
+ LW+PD LNA + AL + S+ N +V R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 462 MQTCTFXFGSRMHNSDEM 515
+Q C S ++ ++
Sbjct: 127 IQICPIYIESFSYHKQKL 144
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.6 bits (46), Expect = 4.9
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +3
Query: 372 RVSNNGSVS*IKRLDISTPISMQLDNWPNDMQTCTFXFGSRMHNSDEMDFV 524
R+ NG+V+ + R + +L+ +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 22.6 bits (46), Expect = 4.9
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +3
Query: 372 RVSNNGSVS*IKRLDISTPISMQLDNWPNDMQTCTFXFGSRMHNSDEMDFV 524
R+ NG+V+ + R + +L+ +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.6 bits (46), Expect = 4.9
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +3
Query: 372 RVSNNGSVS*IKRLDISTPISMQLDNWPNDMQTCTFXFGSRMHNSDEMDFV 524
R+ NG+V+ + R + +L+ +P D C+F S + + +V
Sbjct: 218 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 268
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.6 bits (46), Expect = 4.9
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +3
Query: 372 RVSNNGSVS*IKRLDISTPISMQLDNWPNDMQTCTFXFGSRMHNSDEMDFV 524
R+ NG+V+ + R + +L+ +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,416
Number of Sequences: 438
Number of extensions: 4570
Number of successful extensions: 66
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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