Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_FL5_J13
(884 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 64 1e-12
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 64 1e-12
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 64 2e-12
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 63 4e-12
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 63 4e-12
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 63 4e-12
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 63 4e-12
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 62 7e-12
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 62 9e-12
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 61 1e-11
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 61 2e-11
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 60 3e-11
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 60 4e-11
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 60 4e-11
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 58 8e-11
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 58 8e-11
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 55 8e-10
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 55 1e-09
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 54 2e-09
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 50 2e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 48 9e-08
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 48 2e-07
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 45 1e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 41 1e-05
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 38 1e-04
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 38 1e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 38 1e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 36 4e-04
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 36 4e-04
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 34 0.002
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 34 0.002
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 34 0.002
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 32 0.008
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 31 0.014
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 30 0.025
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.6
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 64.5 bits (150), Expect = 1e-12
Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 6/132 (4%)
Frame = +2
Query: 185 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 358
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 359 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 526
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 527 KFGSXMHNSDEM 562
KFGS N D++
Sbjct: 168 KFGSWTFNGDQV 179
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 64.5 bits (150), Expect = 1e-12
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
Frame = +2
Query: 266 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 439
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 440 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHNSDEMDFR 571
V W + + ++ +P D QTC KFGS ++ ++D R
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLR 180
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 64.1 bits (149), Expect = 2e-12
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 3/132 (2%)
Frame = +2
Query: 185 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 358
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 359 PDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 535
PD+VL N A A +A + + G V W + + ++ +P D QTC KFG
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFG 172
Query: 536 SXMHNSDEMDFR 571
S ++ ++D R
Sbjct: 173 SWTYDGFKVDLR 184
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 62.9 bits (146), Expect = 4e-12
Identities = 36/145 (24%), Positives = 72/145 (49%), Gaps = 2/145 (1%)
Frame = +2
Query: 137 STRSSQRTIGSLPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW 316
S + +R + + ++ +TL + ++ E + A L++ W+D L WN E+
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 317 GCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQL 490
G L ++ +LW+PD+++ N+A G Y V++NGS ++ + + +
Sbjct: 124 GGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDI 183
Query: 491 DNWPNDMQTCTFKFGSXMHNSDEMD 565
+P D Q C KFGS ++ +++D
Sbjct: 184 TWFPFDDQHCDMKFGSWTYDGNQVD 208
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 62.9 bits (146), Expect = 4e-12
Identities = 36/145 (24%), Positives = 72/145 (49%), Gaps = 2/145 (1%)
Frame = +2
Query: 137 STRSSQRTIGSLPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW 316
S + +R + + ++ +TL + ++ E + A L++ W+D L WN E+
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 317 GCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQL 490
G L ++ +LW+PD+++ N+A G Y V++NGS ++ + + +
Sbjct: 124 GGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDI 183
Query: 491 DNWPNDMQTCTFKFGSXMHNSDEMD 565
+P D Q C KFGS ++ +++D
Sbjct: 184 TWFPFDDQHCDMKFGSWTYDGNQVD 208
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 62.9 bits (146), Expect = 4e-12
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 5/139 (3%)
Frame = +2
Query: 188 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 355
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 356 RPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKF 532
PD+VL N A G + +A + G V W + + + +P D QTC KF
Sbjct: 104 LPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163
Query: 533 GSXMHNSDEMDFRD*QKNI 589
GS ++ ++D + +N+
Sbjct: 164 GSWTYDGIQIDLKHINQNM 182
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 62.9 bits (146), Expect = 4e-12
Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 5/107 (4%)
Frame = +2
Query: 266 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 430
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKY 142
Query: 431 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHNSDEMDFR 571
G VSW + + ++ +P D Q+C KFGS +N ++D +
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVDLK 189
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 62.1 bits (144), Expect = 7e-12
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Frame = +2
Query: 224 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 397
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 398 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHNSDEMD 565
G Y V++NGS ++ + + + +P D Q C KFGS ++ +++D
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 140
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 61.7 bits (143), Expect = 9e-12
Identities = 40/135 (29%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Frame = +2
Query: 185 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 358
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 359 PDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 526
PD+VL N A G+Y + +A V +G V W + S+ ++ +P D+QTC
Sbjct: 113 PDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVL 169
Query: 527 KFGSXMHNSDEMDFR 571
K GS ++ ++D R
Sbjct: 170 KLGSWTYDGFKVDLR 184
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 61.3 bits (142), Expect = 1e-11
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Frame = +2
Query: 224 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 397
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 398 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHNSDEMD 565
G Y V+++GS ++ + M + +P D Q C KFGS ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 60.9 bits (141), Expect = 2e-11
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Frame = +2
Query: 224 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 397
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 398 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHNSDEMD 565
G Y V+++GS ++ + M + +P D Q C KFGS ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 60.1 bits (139), Expect = 3e-11
Identities = 31/116 (26%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Frame = +2
Query: 224 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 397
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 398 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHNSDEMD 565
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 59.7 bits (138), Expect = 4e-11
Identities = 31/116 (26%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Frame = +2
Query: 224 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 397
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 398 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHNSDEMD 565
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 59.7 bits (138), Expect = 4e-11
Identities = 31/116 (26%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Frame = +2
Query: 224 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 397
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 398 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHNSDEMD 565
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 58.4 bits (135), Expect = 8e-11
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 6/145 (4%)
Frame = +2
Query: 155 RTIGSLPPDSKIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CST 328
R +G+ + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 37 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 94
Query: 329 WLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDN 496
V SE +W PD+VL N A G+Y + +A + + G V W + + ++
Sbjct: 95 LHVPSEHIWLPDIVLYNNAD---GNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEY 151
Query: 497 WPNDMQTCTFKFGSXMHNSDEMDFR 571
+P D QTC KFGS ++ +D R
Sbjct: 152 FPFDEQTCFMKFGSWTYDGYTVDLR 176
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 58.4 bits (135), Expect = 8e-11
Identities = 36/142 (25%), Positives = 67/142 (47%), Gaps = 2/142 (1%)
Frame = +2
Query: 152 QRTIGSLPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTW 331
+R +G+ + LTL ++ ++ E + L++ W D + WN ++G
Sbjct: 39 ERPVGNESEPLVLSFGLTL-MQIIDVDEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRD 97
Query: 332 L-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 505
L + RLW+PDV++ N+A G Y V NNG+ ++ + + + +P
Sbjct: 98 LRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPF 157
Query: 506 DMQTCTFKFGSXMHNSDEMDFR 571
D Q C KFGS ++ ++D +
Sbjct: 158 DDQRCEMKFGSWTYDGFQLDLQ 179
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 55.2 bits (127), Expect = 8e-10
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 6/133 (4%)
Frame = +2
Query: 185 KIVVNLTLHL--RHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLW 355
+I N+T+ L + + S + + + + + W D LSW ++ G + V S+ +W
Sbjct: 66 QIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIW 125
Query: 356 RPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 526
PD+ + N+ T G V ++GSVS + + + +WP D C
Sbjct: 126 VPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRI 185
Query: 527 KFGSXMHNSDEMD 565
FGS +H+ +E++
Sbjct: 186 NFGSWVHSGEEVN 198
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 54.8 bits (126), Expect = 1e-09
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 3/129 (2%)
Frame = +2
Query: 188 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 364
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 365 VVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 538
+L N A + V S+ G V W+ + + ++ +P D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
Query: 539 XMHNSDEMD 565
++ +++
Sbjct: 152 WTYDGYQLE 160
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -3
Query: 591 CIFFCQSRKSISSLLCIXEPNLNV 520
C+FF + S + +LC P+ N+
Sbjct: 434 CVFFLTTIVSTTVILCGSPPSANI 457
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 53.6 bits (123), Expect = 2e-09
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Frame = +2
Query: 227 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TA 397
I E + T + + +W+D+RL++ G+ + + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 398 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHNSDEMDFR 571
R+ +G V + RL I M L+N+P D Q C +FGS + ++ ++
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGSFGYTKRDVIYK 161
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 50.4 bits (115), Expect = 2e-08
Identities = 32/128 (25%), Positives = 61/128 (47%), Gaps = 5/128 (3%)
Frame = +2
Query: 194 VNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 370
++ L ++H N+ E TV L++ W L+W + E+ ++ V S +W PD+V
Sbjct: 62 IDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIV 121
Query: 371 L--LNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDN--WPNDMQTCTFKFGS 538
+ + + ++ V N+G++ + TP+ + D+ WP D+ CT S
Sbjct: 122 MHSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIAS 179
Query: 539 XMHNSDEM 562
H S+E+
Sbjct: 180 WSHGSNEI 187
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 48.4 bits (110), Expect = 9e-08
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = +2
Query: 269 QMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGS 439
+ +W D RLS+ S + ER+WRPD N + + R+S +G
Sbjct: 90 RQSWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGD 149
Query: 440 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 538
+ + RL I M+L N+P D Q+C GS
Sbjct: 150 ILYSMRLTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 47.6 bits (108), Expect = 2e-07
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 6/144 (4%)
Frame = +2
Query: 155 RTIGSLPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWN--AGEWGCS 325
R G D +V + L +R A I + + + + W+D+RL +N G
Sbjct: 48 RPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYL 107
Query: 326 TWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDN 496
T L + R+W PD+ N + + R+ NGSV + R+ ++ M L
Sbjct: 108 T-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKL 166
Query: 497 WPNDMQTCTFKFGSXMHNSDEMDF 568
+P D Q C+ + S +D++ F
Sbjct: 167 YPLDRQVCSLRMASYGWTTDDLVF 190
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 44.8 bits (101), Expect = 1e-06
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 6/144 (4%)
Frame = +2
Query: 155 RTIGSLPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWN--AGEWGCS 325
R G D VV + + +R + I + + + W+D+RL +N G
Sbjct: 48 RPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDERLRFNDFGGRLKYL 107
Query: 326 TWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDN 496
T L + R+W PD+ N + + R+ NGSV + R+ ++ M L
Sbjct: 108 T-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKL 166
Query: 497 WPNDMQTCTFKFGSXMHNSDEMDF 568
+P D Q C+ + S +D++ F
Sbjct: 167 YPLDRQVCSLRMASYGWTTDDLVF 190
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 41.1 bits (92), Expect = 1e-05
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +2
Query: 227 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 406
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 407 ALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 538
R R+S +GSV++ R + M L +P D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.9 bits (84), Expect = 1e-04
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Frame = +2
Query: 278 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 430
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 431 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHNSDEMDFR 571
+GS++ RL I+ M L +P D Q C + S + ++ ++
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYK 169
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.9 bits (84), Expect = 1e-04
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Frame = +2
Query: 278 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 430
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 431 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHNSDEMDFR 571
+GS++ RL I+ M L +P D Q C + S + ++ ++
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYK 169
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.9 bits (84), Expect = 1e-04
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Frame = +2
Query: 278 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 430
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 431 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHNSDEMDFR 571
+GS++ RL I+ M L +P D Q C + S + ++ ++
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYK 108
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 36.3 bits (80), Expect = 4e-04
Identities = 26/118 (22%), Positives = 55/118 (46%), Gaps = 7/118 (5%)
Frame = +2
Query: 236 SESTVRILAD--LQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGD 403
+E ++ +AD L +W D RL N E + +WRPD NA T +
Sbjct: 45 NEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFHE 104
Query: 404 YALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHNSDEMDF 568
++ + ++ ++ ++ +L + +M+ +++P+D Q C+ S H + ++ F
Sbjct: 105 MSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVF 162
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 36.3 bits (80), Expect = 4e-04
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +2
Query: 344 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 514
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 515 TCTFKFGSXMHNSDEMDFR 571
C + S H +DEM F+
Sbjct: 176 ECKLQMESLSHTTDEMIFQ 194
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 34.3 bits (75), Expect = 0.002
Identities = 33/148 (22%), Positives = 61/148 (41%), Gaps = 4/148 (2%)
Frame = +2
Query: 137 STRSSQRTIGSLPPDSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAG 310
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 311 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISM 484
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 485 QLDNWPNDMQTCTFKFGSXMHNSDEMDF 568
+L+ +P D C+F S + + +
Sbjct: 189 RLNIFPFDDPLCSFAIESISYEQTAITY 216
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 34.3 bits (75), Expect = 0.002
Identities = 33/148 (22%), Positives = 61/148 (41%), Gaps = 4/148 (2%)
Frame = +2
Query: 137 STRSSQRTIGSLPPDSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAG 310
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 311 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISM 484
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 485 QLDNWPNDMQTCTFKFGSXMHNSDEMDF 568
+L+ +P D C+F S + + +
Sbjct: 189 RLNIFPFDDPLCSFAIESISYEQTAITY 216
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 34.3 bits (75), Expect = 0.002
Identities = 33/148 (22%), Positives = 61/148 (41%), Gaps = 4/148 (2%)
Frame = +2
Query: 137 STRSSQRTIGSLPPDSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAG 310
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 311 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISM 484
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 485 QLDNWPNDMQTCTFKFGSXMHNSDEMDF 568
+L+ +P D C+F S + + +
Sbjct: 189 RLNIFPFDDPLCSFAIESISYEQTAITY 216
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 31.9 bits (69), Expect = 0.008
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +2
Query: 350 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 520
+W P V + N ++A T + + + +G V RL + ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 521 TFKFGSXMHNSDEM 562
F S HN +M
Sbjct: 157 PLIFESWTHNVLDM 170
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 31.1 bits (67), Expect = 0.014
Identities = 28/131 (21%), Positives = 54/131 (41%), Gaps = 4/131 (3%)
Frame = +2
Query: 188 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 361
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 362 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 535
D ++ R+ NG+V+++ R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 536 SXMHNSDEMDF 568
S + + +
Sbjct: 257 SISYEQTAITY 267
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 30.3 bits (65), Expect = 0.025
Identities = 29/139 (20%), Positives = 58/139 (41%), Gaps = 11/139 (7%)
Frame = +2
Query: 188 IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 349
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 350 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPNDMQ 514
LW+PD LNA + AL + S+ N +V + R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 515 TCTFKFGSXMHNSDEMDFR 571
C S ++ ++ R
Sbjct: 129 ICPIYIESFSYHKQKLRLR 147
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 331 PSAAAPFPCVPTQS 290
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,726
Number of Sequences: 438
Number of extensions: 4730
Number of successful extensions: 91
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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