Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_FL5_I14
(835 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L00692-1|AAA51969.1| 252|Homo sapiens carcinoembryonic antigen ... 33 1.3
D90278-1|BAA14322.1| 177|Homo sapiens CD66d protein. 33 1.3
D90277-1|BAA14321.1| 252|Homo sapiens nonspecific cross-reactin... 33 1.3
BC106728-1|AAI06729.1| 252|Homo sapiens carcinoembryonic antige... 33 1.3
M22433-1|AAA51965.1| 141|Homo sapiens carcinoembryonic antigen ... 32 2.9
AK090911-1|BAC03545.1| 134|Homo sapiens protein ( Homo sapiens ... 32 2.9
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 3.9
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 3.9
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 3.9
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 3.9
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 3.9
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 3.9
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 3.9
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 3.9
L00693-1|AAA51970.1| 212|Homo sapiens carcinoembryonic antigen ... 31 5.1
BC139779-1|AAI39780.1| 606|Homo sapiens zinc finger protein 652... 30 9.0
AB023141-1|BAA76768.2| 617|Homo sapiens KIAA0924 protein protein. 30 9.0
>L00692-1|AAA51969.1| 252|Homo sapiens carcinoembryonic antigen
protein.
Length = 252
Score = 33.1 bits (72), Expect = 1.3
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +1
Query: 664 PPLASKYQSQLTFVGLLLTSQLKESMCWPPPSSSRITIGGLAL 792
PP AS ++ + + GLLLT+ L W PP+++++TI + L
Sbjct: 3 PPSASPHRECIPWQGLLLTASLLN--FWNPPTTAKLTIESMPL 43
>D90278-1|BAA14322.1| 177|Homo sapiens CD66d protein.
Length = 177
Score = 33.1 bits (72), Expect = 1.3
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +1
Query: 664 PPLASKYQSQLTFVGLLLTSQLKESMCWPPPSSSRITIGGLAL 792
PP AS ++ + + GLLLT+ L W PP+++++TI + L
Sbjct: 3 PPSASPHRECIPWQGLLLTASLLN--FWNPPTTAKLTIESMPL 43
>D90277-1|BAA14321.1| 252|Homo sapiens nonspecific cross-reacting
antigen protein.
Length = 252
Score = 33.1 bits (72), Expect = 1.3
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +1
Query: 664 PPLASKYQSQLTFVGLLLTSQLKESMCWPPPSSSRITIGGLAL 792
PP AS ++ + + GLLLT+ L W PP+++++TI + L
Sbjct: 3 PPSASPHRECIPWQGLLLTASLLN--FWNPPTTAKLTIESMPL 43
>BC106728-1|AAI06729.1| 252|Homo sapiens carcinoembryonic
antigen-related cell adhesion molecule 3 protein.
Length = 252
Score = 33.1 bits (72), Expect = 1.3
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +1
Query: 664 PPLASKYQSQLTFVGLLLTSQLKESMCWPPPSSSRITIGGLAL 792
PP AS ++ + + GLLLT+ L W PP+++++TI + L
Sbjct: 3 PPSASPHRECIPWQGLLLTASLLN--FWNPPTTAKLTIESMPL 43
>M22433-1|AAA51965.1| 141|Homo sapiens carcinoembryonic antigen
protein.
Length = 141
Score = 31.9 bits (69), Expect = 2.9
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +1
Query: 664 PPLASKYQSQLTFVGLLLTSQLKESMCWPPPSSSRITI 777
PP AS ++ + + GLLLT+ L W PP+++++TI
Sbjct: 3 PPSASPHRECIPWQGLLLTASLLN--FWNPPTTAKLTI 38
>AK090911-1|BAC03545.1| 134|Homo sapiens protein ( Homo sapiens
cDNA FLJ33592 fis, clone BRAMY2012691. ).
Length = 134
Score = 31.9 bits (69), Expect = 2.9
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -3
Query: 170 KGGVITRKXPRESIV*QRCSGTSPILRASFCS 75
+G V +R+ PR QRCS S LR+ FCS
Sbjct: 67 RGSVSSRRRPRARSSRQRCSSASFCLRSCFCS 98
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 522 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 683
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 522 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 683
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 522 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 683
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 522 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 683
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 522 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 683
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 522 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 683
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 522 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 683
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 522 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 683
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>L00693-1|AAA51970.1| 212|Homo sapiens carcinoembryonic antigen
protein.
Length = 212
Score = 31.1 bits (67), Expect = 5.1
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +1
Query: 664 PPLASKYQSQLTFVGLLLTSQLKESMCWPPPSSSRITIGGLAL 792
PP A ++ + + GLLLT+ L W PP+++++TI + L
Sbjct: 3 PPSAPPHRECIPWQGLLLTASLLN--FWNPPTTAKLTIESMPL 43
>BC139779-1|AAI39780.1| 606|Homo sapiens zinc finger protein 652
protein.
Length = 606
Score = 30.3 bits (65), Expect = 9.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 300 VPLVVSAASAIPSLVNAFSSSKPPQTDNP 386
+PL S A+ +PS+VN ++ PP NP
Sbjct: 506 IPLTTSPATPVPSVVNTATTPTPPINMNP 534
>AB023141-1|BAA76768.2| 617|Homo sapiens KIAA0924 protein protein.
Length = 617
Score = 30.3 bits (65), Expect = 9.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 300 VPLVVSAASAIPSLVNAFSSSKPPQTDNP 386
+PL S A+ +PS+VN ++ PP NP
Sbjct: 517 IPLTTSPATPVPSVVNTATTPTPPINMNP 545
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,559,909
Number of Sequences: 237096
Number of extensions: 2463811
Number of successful extensions: 5000
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5000
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10482413384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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