Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_FL5_H13
(897 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 69 6e-14
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 64 1e-12
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 64 1e-12
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 64 2e-12
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 64 2e-12
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 63 3e-12
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 63 4e-12
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 62 5e-12
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 62 7e-12
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 62 7e-12
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 62 7e-12
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 61 1e-11
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 61 2e-11
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 60 2e-11
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 60 2e-11
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 60 3e-11
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 58 8e-11
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 58 8e-11
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 57 3e-10
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 54 1e-09
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 52 9e-09
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 50 3e-08
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 47 2e-07
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 46 4e-07
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 45 8e-07
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 42 1e-05
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 37 3e-04
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 37 3e-04
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 37 3e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 37 3e-04
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 36 7e-04
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 33 0.005
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 32 0.006
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 30 0.033
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 3.8
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 5.0
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 68.9 bits (161), Expect = 6e-14
Identities = 51/168 (30%), Positives = 75/168 (44%), Gaps = 9/168 (5%)
Frame = +1
Query: 85 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 243
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 244 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTXGDYAL-RAR 417
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 418 VSNNGSVSWIKRLDISTPISMQLXXWPNDMQTCTFKFGSRMHXXDEMD 561
+ G V W + + + +P D QTC KFGS + ++D
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQID 174
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 64.5 bits (150), Expect = 1e-12
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
Frame = +1
Query: 220 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTX- 393
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 394 GDYALRARVSNNGSVSWIKRLDISTPISMQLXXWPNDMQTCTFKFGSRMHXXDEMDS*LT 573
G Y V++NGS ++ + + + +P D Q C KFGS + +++D L+
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVLS 212
Query: 574 XE 579
E
Sbjct: 213 SE 214
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 64.5 bits (150), Expect = 1e-12
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
Frame = +1
Query: 220 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTX- 393
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 394 GDYALRARVSNNGSVSWIKRLDISTPISMQLXXWPNDMQTCTFKFGSRMHXXDEMDS*LT 573
G Y V++NGS ++ + + + +P D Q C KFGS + +++D L+
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVLS 212
Query: 574 XE 579
E
Sbjct: 213 SE 214
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 64.1 bits (149), Expect = 2e-12
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
Frame = +1
Query: 220 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTX- 393
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 394 GDYALRARVSNNGSVSWIKRLDISTPISMQLXXWPNDMQTCTFKFGSRMHXXDEMDS*LT 573
G Y V++NGS ++ + + + +P D Q C KFGS + +++D L+
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVLS 144
Query: 574 XE 579
E
Sbjct: 145 SE 146
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 63.7 bits (148), Expect = 2e-12
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
Frame = +1
Query: 220 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTX- 393
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 394 GDYALRARVSNNGSVSWIKRLDISTPISMQLXXWPNDMQTCTFKFGSRMHXXDEMDS*LT 573
G Y V+++GS ++ + M + +P D Q C KFGS + +++D L+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVLS 144
Query: 574 XE 579
E
Sbjct: 145 SE 146
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 63.3 bits (147), Expect = 3e-12
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
Frame = +1
Query: 220 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTX- 393
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 394 GDYALRARVSNNGSVSWIKRLDISTPISMQLXXWPNDMQTCTFKFGSRMHXXDEMDS*LT 573
G Y V+++GS ++ + M + +P D Q C KFGS + +++D L+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVLS 144
Query: 574 XE 579
E
Sbjct: 145 SE 146
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 62.9 bits (146), Expect = 4e-12
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 9/162 (5%)
Frame = +1
Query: 103 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 261
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 262 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTXGDYALRARVSNNGS 435
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 436 VSWIKRLDISTPISMQLXXWPNDMQTCTFKFGSRMHXXDEMD 561
V W + + + +P D QTC KFGS + ++D
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 62.5 bits (145), Expect = 5e-12
Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 6/132 (4%)
Frame = +1
Query: 181 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 354
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 355 PDVVLLNAAATTXGDYALRAR----VSNNGSVSWIKRLDISTPISMQLXXWPNDMQTCTF 522
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QTC
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 523 KFGSRMHXXDEM 558
KFGS D++
Sbjct: 168 KFGSWTFNGDQV 179
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 62.1 bits (144), Expect = 7e-12
Identities = 33/122 (27%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
Frame = +1
Query: 220 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTX- 393
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 394 GDYALRARVSNNGSVSWIKRLDISTPISMQLXXWPNDMQTCTFKFGSRMHXXDEMDS*LT 573
G Y V+++GS ++ + + + +P D Q C KFGS + +++D L+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVLS 144
Query: 574 XE 579
E
Sbjct: 145 SE 146
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 62.1 bits (144), Expect = 7e-12
Identities = 33/122 (27%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
Frame = +1
Query: 220 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTX- 393
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 394 GDYALRARVSNNGSVSWIKRLDISTPISMQLXXWPNDMQTCTFKFGSRMHXXDEMDS*LT 573
G Y V+++GS ++ + + + +P D Q C KFGS + +++D L+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVLS 144
Query: 574 XE 579
E
Sbjct: 145 SE 146
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 62.1 bits (144), Expect = 7e-12
Identities = 33/122 (27%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
Frame = +1
Query: 220 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTX- 393
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 394 GDYALRARVSNNGSVSWIKRLDISTPISMQLXXWPNDMQTCTFKFGSRMHXXDEMDS*LT 573
G Y V+++GS ++ + + + +P D Q C KFGS + +++D L+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVLS 144
Query: 574 XE 579
E
Sbjct: 145 SE 146
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 61.3 bits (142), Expect = 1e-11
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 7/149 (4%)
Frame = +1
Query: 109 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 276
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 277 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TXGDYALRARVSNNGSVSWI 447
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 448 KRLDISTPISMQLXXWPNDMQTCTFKFGS 534
RL I M L +P D Q C +FGS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 60.9 bits (141), Expect = 2e-11
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 9/181 (4%)
Frame = +1
Query: 64 RFLLTCAIASAAE--CENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-N 222
R+ L AIA AA + +++ LL TY+ P +V++ L L +
Sbjct: 3 RWTLMAAIALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIID 62
Query: 223 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTX-G 396
+ E + L++ W D + WN ++G L + RLW+PDV++ N+A G
Sbjct: 63 VDEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDG 122
Query: 397 DYALRARVSNNGSVSWIKRLDISTPISMQLXXWPNDMQTCTFKFGSRMHXXDEMDS*LTX 576
Y V NNG+ ++ + + + +P D Q C KFGS + ++D L
Sbjct: 123 TYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQD 182
Query: 577 E 579
E
Sbjct: 183 E 183
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 60.5 bits (140), Expect = 2e-11
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 12/166 (7%)
Frame = +1
Query: 73 LTCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRE 231
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 232 SESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTXGDYAL 408
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEV 119
Query: 409 ----RARVSNNGSVSWIKRLDISTPISMQLXXWPNDMQTCTFKFGS 534
+A + + G V W + + + +P D QTC KFGS
Sbjct: 120 TIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGS 165
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 60.5 bits (140), Expect = 2e-11
Identities = 45/156 (28%), Positives = 70/156 (44%), Gaps = 12/156 (7%)
Frame = +1
Query: 130 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 288
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 289 LSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTXGDYAL----RARVSNNGSVSWIKR 453
L WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPP 151
Query: 454 LDISTPISMQLXXWPNDMQTCTFKFGSRMHXXDEMD 561
+ + + +P D Q+C KFGS + ++D
Sbjct: 152 AIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 60.1 bits (139), Expect = 3e-11
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 7/151 (4%)
Frame = +1
Query: 130 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 294
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 295 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTXGDYALRARVSNNGSVSWIKRLDIST 468
W E+G L V S+ +WRPD+VL N A A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 469 PISMQLXXWPNDMQTCTFKFGSRMHXXDEMD 561
+ + +P D QTC KFGS + ++D
Sbjct: 152 SCEIDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 58.4 bits (135), Expect = 8e-11
Identities = 39/160 (24%), Positives = 70/160 (43%), Gaps = 8/160 (5%)
Frame = +1
Query: 103 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 267
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 268 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTXGDYALRARVSNNGSV 438
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 439 SWIKRLDISTPISMQLXXWPNDMQTCTFKFGSRMHXXDEM 558
+ + WP D+ CT S H +E+
Sbjct: 148 LCVPFTTYTPVCEYDHTWWPYDILNCTIHIASWSHGSNEI 187
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 58.4 bits (135), Expect = 8e-11
Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Frame = +1
Query: 130 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 294
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 295 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTXGDYAL----RARVSNNGSVSWIKRLD 459
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 460 ISTPISMQLXXWPNDMQTCTFKFGSRMHXXDEMD 561
+ S+ + +P D+QTC K GS + ++D
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 56.8 bits (131), Expect = 3e-10
Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 8/160 (5%)
Frame = +1
Query: 106 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 273
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 274 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTXGDYAL---RARVSNNGSVS 441
W D LSW ++ G + V S+ +W PD+ + N+ T + V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 442 WIKRLDISTPISMQLXXWPNDMQTCTFKFGSRMHXXDEMD 561
+ + + WP D C FGS +H +E++
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVN 198
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 54.4 bits (125), Expect = 1e-09
Identities = 33/120 (27%), Positives = 50/120 (41%), Gaps = 3/120 (2%)
Frame = +1
Query: 184 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 360
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 361 VVLLNAAATTXGDYALRARV--SNNGSVSWIKRLDISTPISMQLXXWPNDMQTCTFKFGS 534
+L N A + V S+ G V W+ + + + +P D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 51.6 bits (118), Expect = 9e-09
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 8/147 (5%)
Frame = +1
Query: 118 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 282
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 283 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTXGDYALR---ARVSNNGSVSWIKR 453
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 454 LDISTPISMQLXXWPNDMQTCTFKFGS 534
L I M+L +P D Q+C GS
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 50.0 bits (114), Expect = 3e-08
Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 12/155 (7%)
Frame = +1
Query: 130 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 288
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 289 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTXGDYALR---ARVSNNGSVSWIKR 453
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 454 LDISTPISMQLXXWPNDMQTCTFKFGSRMHXXDEM 558
+ ++ M L +P D Q C+ + S D++
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDL 188
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 47.2 bits (107), Expect = 2e-07
Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 12/155 (7%)
Frame = +1
Query: 130 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 288
++D++L YD P D VV + + +R + I + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 289 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTXGDYALR---ARVSNNGSVSWIKR 453
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 454 LDISTPISMQLXXWPNDMQTCTFKFGSRMHXXDEM 558
+ ++ M L +P D Q C+ + S D++
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDL 188
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 46.4 bits (105), Expect = 4e-07
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 13/155 (8%)
Frame = +1
Query: 109 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 276
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 277 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTXGDYALRARVSNN 429
D RL++ G T V SE +W PD +N ATT ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 430 GSVSWIKRLDISTPISMQLXXWPNDMQTCTFKFGS 534
GS++ RL I+ M L +P D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 45.2 bits (102), Expect = 8e-07
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 13/155 (8%)
Frame = +1
Query: 109 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 276
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 277 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTXGDYALRARVSNN 429
D RL++ G T V SE +W PD +N ATT ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 430 GSVSWIKRLDISTPISMQLXXWPNDMQTCTFKFGS 534
GS++ RL I+ M L +P D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 41.5 bits (93), Expect = 1e-05
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +1
Query: 223 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTXGDY 402
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 403 ALR---ARVSNNGSVSWIKRLDISTPISMQLXXWPNDMQTCTFKFGS 534
R R+S +GSV++ R + M L +P D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 36.7 bits (81), Expect = 3e-04
Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 8/151 (5%)
Frame = +1
Query: 106 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQM 270
E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 271 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTXGDYALRARVSNNGSVS 441
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 442 WIKRLDISTPISMQLXXWPNDMQTCTFKFGS 534
++ R + +L +P D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 36.7 bits (81), Expect = 3e-04
Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 8/151 (5%)
Frame = +1
Query: 106 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQM 270
E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 271 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTXGDYALRARVSNNGSVS 441
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 442 WIKRLDISTPISMQLXXWPNDMQTCTFKFGS 534
++ R + +L +P D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 36.7 bits (81), Expect = 3e-04
Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 8/151 (5%)
Frame = +1
Query: 106 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQM 270
E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 271 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTXGDYALRARVSNNGSVS 441
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 442 WIKRLDISTPISMQLXXWPNDMQTCTFKFGS 534
++ R + +L +P D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 36.7 bits (81), Expect = 3e-04
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Frame = +1
Query: 274 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTXGDYALRARVSN 426
W D RL++ G T V SE +W PD +N ATT ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 427 NGSVSWIKRLDISTPISMQLXXWPNDMQTCTFKFGS 534
+GS++ RL I+ M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 35.5 bits (78), Expect = 7e-04
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +1
Query: 340 ERLWRPDVVLLNAAATTXGDYALRAR---VSNNGSVSWIKRLDISTPISMQLXXWPNDMQ 510
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 511 TCTFKFGSRMHXXDEM 558
C + S H DEM
Sbjct: 176 ECKLQMESLSHTTDEM 191
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 32.7 bits (71), Expect = 0.005
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 4/121 (3%)
Frame = +1
Query: 184 IVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 357
+ VN++ L L A+ ES ++ LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 358 DV--VLLNAAATTXGDYALRARVSNNGSVSWIKRLDISTPISMQLXXWPNDMQTCTFKFG 531
D ++ R+ NG+V+++ R + +L +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 532 S 534
S
Sbjct: 257 S 257
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 32.3 bits (70), Expect = 0.006
Identities = 25/118 (21%), Positives = 48/118 (40%), Gaps = 5/118 (4%)
Frame = +1
Query: 220 NIRESESTVRIQADLQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTX 393
+I E T L +W D RL N E + +WRPD NA T
Sbjct: 43 SINEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTF 102
Query: 394 GDYALRAR---VSNNGSVSWIKRLDISTPISMQLXXWPNDMQTCTFKFGSRMHXXDEM 558
+ ++ + ++ ++ ++ +L + +M+ +P+D Q C+ S H ++
Sbjct: 103 HEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDL 160
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 29.9 bits (64), Expect = 0.033
Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 11/122 (9%)
Frame = +1
Query: 184 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 345
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 346 LWRPDVVLLNAAATTXGDYALRARVSN-----NGSVSWIKRLDISTPISMQLXXWPNDMQ 510
LW+PD LNA + AL + S+ N +V + R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 511 TC 516
C
Sbjct: 129 IC 130
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 23.0 bits (47), Expect = 3.8
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -1
Query: 126 GQ*CCVFAFCRTSYSTSEEKPVTRII 49
G+ CC F T Y + K VT+ I
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQCI 627
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 5.0
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 327 PSAAAPLPCVPTQS 286
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,698
Number of Sequences: 438
Number of extensions: 4432
Number of successful extensions: 89
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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