Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_FL5_H12
         (869 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC069813-1|AAH69813.1|  363|Homo sapiens G protein-coupled recep...    30   9.5  
BC069343-1|AAH69343.1|  363|Homo sapiens G protein-coupled recep...    30   9.5  
BC057778-1|AAH57778.1|  363|Homo sapiens G protein-coupled recep...    30   9.5  
AY359107-1|AAQ89465.1|  363|Homo sapiens GPR78 protein.                30   9.5  
AF411107-1|AAL26479.1|  363|Homo sapiens G protein-coupled recep...    30   9.5  
AB065673-1|BAC05898.1|  363|Homo sapiens seven transmembrane hel...    30   9.5  

>BC069813-1|AAH69813.1|  363|Homo sapiens G protein-coupled receptor
           78 protein.
          Length = 363

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 19/64 (29%), Positives = 29/64 (45%)
 Frame = -3

Query: 723 RSHRTCSVIGIELSRF*ISATIHSLMSWFTVLVPCNSSSSHWLKNDSCRNYPLVMTDPLL 544
           R HR    IGI ++ F I    + +M+    LVP  + ++ W     C  Y   + DP  
Sbjct: 235 RRHRATRKIGIAIATFLICFAPY-VMTRLAELVPFVTVNAQWGILSKCLTYSKAVADPFT 293

Query: 543 RSIL 532
            S+L
Sbjct: 294 YSLL 297


>BC069343-1|AAH69343.1|  363|Homo sapiens G protein-coupled receptor
           78 protein.
          Length = 363

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 19/64 (29%), Positives = 29/64 (45%)
 Frame = -3

Query: 723 RSHRTCSVIGIELSRF*ISATIHSLMSWFTVLVPCNSSSSHWLKNDSCRNYPLVMTDPLL 544
           R HR    IGI ++ F I    + +M+    LVP  + ++ W     C  Y   + DP  
Sbjct: 235 RRHRATRKIGIAIATFLICFAPY-VMTRLAELVPFVTVNAQWGILSKCLTYSKAVADPFT 293

Query: 543 RSIL 532
            S+L
Sbjct: 294 YSLL 297


>BC057778-1|AAH57778.1|  363|Homo sapiens G protein-coupled receptor
           78 protein.
          Length = 363

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 19/64 (29%), Positives = 29/64 (45%)
 Frame = -3

Query: 723 RSHRTCSVIGIELSRF*ISATIHSLMSWFTVLVPCNSSSSHWLKNDSCRNYPLVMTDPLL 544
           R HR    IGI ++ F I    + +M+    LVP  + ++ W     C  Y   + DP  
Sbjct: 235 RRHRATRKIGIAIATFLICFAPY-VMTRLAELVPFVTVNAQWGILSKCLTYSKAVADPFT 293

Query: 543 RSIL 532
            S+L
Sbjct: 294 YSLL 297


>AY359107-1|AAQ89465.1|  363|Homo sapiens GPR78 protein.
          Length = 363

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 19/64 (29%), Positives = 29/64 (45%)
 Frame = -3

Query: 723 RSHRTCSVIGIELSRF*ISATIHSLMSWFTVLVPCNSSSSHWLKNDSCRNYPLVMTDPLL 544
           R HR    IGI ++ F I    + +M+    LVP  + ++ W     C  Y   + DP  
Sbjct: 235 RRHRATRKIGIAIATFLICFAPY-VMTRLAELVPFVTVNAQWGILSKCLTYSKAVADPFT 293

Query: 543 RSIL 532
            S+L
Sbjct: 294 YSLL 297


>AF411107-1|AAL26479.1|  363|Homo sapiens G protein-coupled receptor
           protein.
          Length = 363

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 19/64 (29%), Positives = 29/64 (45%)
 Frame = -3

Query: 723 RSHRTCSVIGIELSRF*ISATIHSLMSWFTVLVPCNSSSSHWLKNDSCRNYPLVMTDPLL 544
           R HR    IGI ++ F I    + +M+    LVP  + ++ W     C  Y   + DP  
Sbjct: 235 RRHRATRKIGIAIATFLICFAPY-VMTRLAELVPFVTVNAQWGILSKCLTYSKAVADPFT 293

Query: 543 RSIL 532
            S+L
Sbjct: 294 YSLL 297


>AB065673-1|BAC05898.1|  363|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 363

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 19/64 (29%), Positives = 29/64 (45%)
 Frame = -3

Query: 723 RSHRTCSVIGIELSRF*ISATIHSLMSWFTVLVPCNSSSSHWLKNDSCRNYPLVMTDPLL 544
           R HR    IGI ++ F I    + +M+    LVP  + ++ W     C  Y   + DP  
Sbjct: 235 RRHRATRKIGIAIATFLICFAPY-VMTRLAELVPFVTVNAQWGILSKCLTYSKAVADPFT 293

Query: 543 RSIL 532
            S+L
Sbjct: 294 YSLL 297


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,398,883
Number of Sequences: 237096
Number of extensions: 2344153
Number of successful extensions: 11919
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11919
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)