Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_FL5_G19
         (878 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q24310 Cluster: Polyprotein; n=1; Drosophila melanogast...    48   4e-04
UniRef50_Q2LEB6 Cluster: Jacob 7; n=1; Entamoeba invadens|Rep: J...    37   0.78 
UniRef50_Q3WIG7 Cluster: Phage integrase; n=2; Frankia sp. EAN1p...    36   1.0  
UniRef50_A6S269 Cluster: Putative uncharacterized protein; n=2; ...    35   3.1  
UniRef50_A5ZKL1 Cluster: Putative uncharacterized protein; n=2; ...    34   5.5  
UniRef50_Q4YVL7 Cluster: Putative uncharacterized protein; n=5; ...    33   7.2  

>UniRef50_Q24310 Cluster: Polyprotein; n=1; Drosophila
           melanogaster|Rep: Polyprotein - Drosophila melanogaster
           (Fruit fly)
          Length = 1053

 Score = 47.6 bits (108), Expect = 4e-04
 Identities = 38/123 (30%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
 Frame = +3

Query: 303 NTSSGTPQERECSIRKSCNNVS--VTSMEDLSHEEIVTSYVLAHVAQFDCRLHHMAFTNG 476
           N  +  P   EC    +   V+   T   ++  EEI  + VLAH+A  D RL  + FT+ 
Sbjct: 111 NLLNSRPTAAECYAVYASRLVTQLTTKWRNMEIEEIAVTTVLAHMANIDSRLQRVLFTSN 170

Query: 477 NTTRNKLLQEIKASANLK*NRSQ*WICHDEWVVPTRIVFKPMTTAXVTWH*YSKPGHETV 656
             TR+KL  E+KA    K   ++     D+ + P +   K    + V  H  SKPG    
Sbjct: 171 VRTRSKLQAELKAFTFDKKRHAR-----DDNLGPDQ---KNRKASPVVCHFCSKPGRRIA 222

Query: 657 NCR 665
            CR
Sbjct: 223 ECR 225


>UniRef50_Q2LEB6 Cluster: Jacob 7; n=1; Entamoeba invadens|Rep:
           Jacob 7 - Entamoeba invadens
          Length = 614

 Score = 36.7 bits (81), Expect = 0.78
 Identities = 25/88 (28%), Positives = 39/88 (44%)
 Frame = +3

Query: 114 NC*DNILLIKSGTKK*HRFTWCSTR*CLPSSLHQK*DQDSTLTGVTCLNMFEVQQKKKHD 293
           +C D    +KS T+K      C+ + C   S H+K  ++ST+     +   E + K+K  
Sbjct: 260 HCNDKSCEVKSSTEKSEESKHCNDKSCEEKSCHEK-SEESTIVVTPSVEKSEEKSKEKSK 318

Query: 294 ADQNTSSGTPQERECSIRKSCNNVSVTS 377
                S   P E+ C   KSC+  S  S
Sbjct: 319 EKSEESKHCP-EKSCE-EKSCHEKSEES 344


>UniRef50_Q3WIG7 Cluster: Phage integrase; n=2; Frankia sp.
           EAN1pec|Rep: Phage integrase - Frankia sp. EAN1pec
          Length = 572

 Score = 36.3 bits (80), Expect = 1.0
 Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
 Frame = +3

Query: 243 GVTCLNMFEVQQKKKHDADQNTSSGTPQERECSIRKSCNNVSVTSME-DLSHEEIVTSYV 419
           G+TC+   E  + ++  A Q  ++ +P+E EC  R SC N++ T    D  H  +     
Sbjct: 472 GITCVYRAETAECRRILASQGLAADSPRESEC--RSSCTNLAFTDRAVDQLHARLTHLDA 529

Query: 420 LAHVAQFDCRLHHMAFTNGNTTRNKLLQEIKASANL 527
            A  +     L   A    N TR  + + + +S++L
Sbjct: 530 TADHSLTPQPLRDRAQAQANATRAVIDRHVASSSHL 565


>UniRef50_A6S269 Cluster: Putative uncharacterized protein; n=2;
           Sclerotiniaceae|Rep: Putative uncharacterized protein -
           Botryotinia fuckeliana B05.10
          Length = 1289

 Score = 34.7 bits (76), Expect = 3.1
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +2

Query: 173 LVFNKIMSTLKLTSEVRSGLYSHWRDVFEHVRS 271
           + FN ++  +K+  E+   L +HWRDV  H+++
Sbjct: 388 VTFNNLVDKIKVAGEITEMLITHWRDVVRHMKN 420


>UniRef50_A5ZKL1 Cluster: Putative uncharacterized protein; n=2;
           Bacteroides|Rep: Putative uncharacterized protein -
           Bacteroides caccae ATCC 43185
          Length = 234

 Score = 33.9 bits (74), Expect = 5.5
 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
 Frame = +1

Query: 325 KSVNAAYVSRVITSLLPRWKI*ATKKSSHLTFWL-MLPSLTVDFITWHLL---TEIQHVT 492
           K     Y S  I S   RW   +TKK  +L+++L +LPS  +D++  H L    E+ H  
Sbjct: 147 KQCGLPYASVKINSSQGRWGSCSTKKDINLSYYLVLLPSYLIDYVLLHELCHTREMNHSE 206

Query: 493 SYCKKLRQ 516
            +   L Q
Sbjct: 207 RFWSLLNQ 214


>UniRef50_Q4YVL7 Cluster: Putative uncharacterized protein; n=5;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 327

 Score = 33.5 bits (73), Expect = 7.2
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = +3

Query: 342 IRKSCNNVSVTSMEDLSHEEIVTSYVLAHVAQFDCRLHHMAFTNGNTTRNKLLQ 503
           I ++ N  S+  ++     E + +YV  H   FDC   ++     N T+NK++Q
Sbjct: 171 IIENINKYSIDQIDKFEEIEHIITYVYFHNIHFDCMTENLVTFLENHTKNKIIQ 224


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 781,694,359
Number of Sequences: 1657284
Number of extensions: 13918735
Number of successful extensions: 30319
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 29264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30303
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78702453312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)