Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_FL5_G19
         (878 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0042 - 12731228-12731362,12731984-12732046,12732136-127322...    33   0.30 
01_05_0634 + 23843152-23843272,23843441-23843628,23843876-238442...    32   0.53 
09_02_0559 + 10666974-10667078,10667251-10667614,10671204-106715...    30   2.8  
04_04_1215 - 31803261-31804847,31804927-31805052,31806502-31806879     29   3.7  
02_01_0700 + 5229681-5229719,5230235-5230334,5230406-5230463,523...    29   3.7  

>07_03_0042 -
           12731228-12731362,12731984-12732046,12732136-12732207,
           12732783-12732855,12732937-12733005,12733375-12733439,
           12733677-12734087,12734186-12734230,12734338-12734413,
           12734555-12734629,12735101-12735207,12736573-12736635
          Length = 417

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = +2

Query: 146 RNQEVTSFYLVFNKIMSTLKLTSEVRSGLYSHWRD 250
           ++Q  TS Y +FNK+ STL   S V SG ++  RD
Sbjct: 159 KSQAGTSGYTLFNKLRSTLSSASPVLSGAFAKLRD 193


>01_05_0634 +
           23843152-23843272,23843441-23843628,23843876-23844205,
           23844319-23844565,23844591-23844668,23844740-23845024,
           23845139-23845225,23845365-23845415,23845625-23845761,
           23845853-23846437
          Length = 702

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
 Frame = +3

Query: 267 EVQQKKKHDADQNTSSG----TPQERECSIRKSCNNVSV-TSMEDLSHEEIV 407
           E++QK  HDA  N + G    T   +EC  RK C++ S+   M  L H+ I+
Sbjct: 524 ELEQKTVHDASSNEALGQLGETVNAKECIERKLCSSYSLGRDMLGLKHDSIL 575


>09_02_0559 +
           10666974-10667078,10667251-10667614,10671204-10671541,
           10671701-10671706,10672019-10672255
          Length = 349

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +1

Query: 463 HLLTEIQHVTSYCKKLRQVQISSKIDRNNG 552
           H++ ++ H+ S+C  LR  ++   I  N G
Sbjct: 221 HVVVQLAHIKSFCSLLRNTEVKLNIPNNKG 250


>04_04_1215 - 31803261-31804847,31804927-31805052,31806502-31806879
          Length = 696

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +3

Query: 297 DQNTSSGTPQERECSIRKSCN-NVSVTSMEDLSHEE 401
           D   SSG+P   E S+ K C+ ++S TS  D  ++E
Sbjct: 525 DMQASSGSPDGSEPSVNKICDGSISWTSRNDFEYKE 560


>02_01_0700 +
           5229681-5229719,5230235-5230334,5230406-5230463,
           5230542-5230898,5230991-5231088,5232054-5232144,
           5232183-5232243
          Length = 267

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 20/77 (25%), Positives = 37/77 (48%)
 Frame = +1

Query: 340 AYVSRVITSLLPRWKI*ATKKSSHLTFWLMLPSLTVDFITWHLLTEIQHVTSYCKKLRQV 519
           A ++  +TS+    K+ AT ++  +T  + L  +T      +    +  VTS+C+ L  +
Sbjct: 127 AQITVTVTSVSKMTKLHATNEAVPITPAIQLVEITAPAAADNYNDVVSAVTSFCEYLAPL 186

Query: 520 QISSKIDRNNGSVMTSG 570
              SK   + G V T+G
Sbjct: 187 LHLSKPGNSTGIVPTAG 203


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,965,625
Number of Sequences: 37544
Number of extensions: 378321
Number of successful extensions: 751
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 751
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)