Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_FL5_G05
         (861 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    24   2.1  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   2.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   4.8  
DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex det...    22   6.3  
DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex det...    22   6.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   6.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   6.3  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   8.4  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   8.4  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 5/28 (17%)
 Frame = +1

Query: 553 HTTRPRRDY-----EVDGRDYHFVASRE 621
           H  RP  DY     E DG DY  V SRE
Sbjct: 16  HFARPGGDYSLDEIEWDGGDYEVVESRE 43


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +1

Query: 769 RLQVAQLFLLHIYQTKECXVYME 837
           +L  A  FL++ + T+EC + ME
Sbjct: 160 KLSCAMNFLIYPHDTQECKLQME 182


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -3

Query: 625  SARGWPRSGSPAHPP 581
            SAR  P SGSP  PP
Sbjct: 1847 SARNIPVSGSPEPPP 1861


>DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 13/52 (25%), Positives = 25/52 (48%)
 Frame = +3

Query: 657 RGRPVQRQSVRNVRGIRAXSRRXXQALHFGRQR*RNQEIASSTTIPIAYLSN 812
           R R  ++ S +N +  R    R  +     R+R R++E    +++   Y+SN
Sbjct: 41  RSREREQNSYKNEKEYRKYRERSKERSRDKRERERSKERKIISSLSNNYISN 92


>DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 13/52 (25%), Positives = 25/52 (48%)
 Frame = +3

Query: 657 RGRPVQRQSVRNVRGIRAXSRRXXQALHFGRQR*RNQEIASSTTIPIAYLSN 812
           R R  ++ S +N +  R    R  +     R+R R++E    +++   Y+SN
Sbjct: 41  RSREREQNSYKNEKEYRKYRERSKERSRDKRERERSKERKIISSLSNNYISN 92


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -1

Query: 660 LDKQVILDVALHLLAAGHEVVVPPIHL 580
           L +QV++    ++  A H  V+PP+ L
Sbjct: 215 LTRQVVVSSVANVRIADHRGVMPPVIL 241


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -1

Query: 660 LDKQVILDVALHLLAAGHEVVVPPIHL 580
           L +QV++    ++  A H  V+PP+ L
Sbjct: 215 LTRQVVVSSVANVRIADHRGVMPPVIL 241


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +1

Query: 430 ETVQQLTIAYTRPVIILGPLKDRINDD 510
           ET+      Y  P    GP+ +++N+D
Sbjct: 283 ETLANFMRFYYNPFTPFGPVTEKVNND 309


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +1

Query: 430 ETVQQLTIAYTRPVIILGPLKDRINDD 510
           ET+      Y  P    GP+ +++N+D
Sbjct: 283 ETLANFMRFYYNPFTPFGPVTEKVNND 309


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 246,437
Number of Sequences: 438
Number of extensions: 5321
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)