Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_FL5_G03
(876 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 25 0.69
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 25 1.2
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 23 3.7
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 23 3.7
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 23 3.7
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 23 3.7
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 23 3.7
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 3.7
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 23 3.7
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 3.7
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 3.7
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 3.7
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 3.7
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 3.7
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 23 3.7
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 3.7
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 3.7
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 3.7
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 22 6.5
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 8.5
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 25.4 bits (53), Expect = 0.69
Identities = 19/89 (21%), Positives = 42/89 (47%)
Frame = -3
Query: 427 NHLLQKIRSFNIKLAPSSRVPLGVVRRPAVFRDGAVQDHRYLRTVREPPLVRGHHHFEGV 248
N++ +I S ++ ++ S+ V + + P ++ + R R VR+ + + +
Sbjct: 873 NNVALRITSMSVTISLSASVTIACLFSPKLY----IILIRPERNVRQSMMPTRYSTTKSS 928
Query: 247 LVDPKRETRILAPFSEALSTFDQYKTIKK 161
V + ++AP + +T DQ K +KK
Sbjct: 929 AVTATNASSMIAPVALTAATCDQNKAVKK 957
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 24.6 bits (51), Expect = 1.2
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3
Query: 504 MRRSPLGSVWSRNVNI 551
+ RSP GSV SR+VN+
Sbjct: 82 LARSPAGSVHSRDVNV 97
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 72 KISRVKSECTRLVVNLKSSWEKS 4
KI++++ T LVVN+K S +S
Sbjct: 174 KINKIEEHDTVLVVNIKKSGNES 196
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 72 KISRVKSECTRLVVNLKSSWEKS 4
KI++++ T LVVN+K S +S
Sbjct: 185 KINKIEEHDTVLVVNIKKSGNES 207
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 72 KISRVKSECTRLVVNLKSSWEKS 4
KI++++ T LVVN+K S +S
Sbjct: 174 KINKIEEHDTVLVVNIKKSGNES 196
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 72 KISRVKSECTRLVVNLKSSWEKS 4
KI++++ T LVVN+K S +S
Sbjct: 185 KINKIEEHDTVLVVNIKKSGNES 207
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 72 KISRVKSECTRLVVNLKSSWEKS 4
KI++++ T LVVN+K S +S
Sbjct: 185 KINKIEEHDTVLVVNIKKSGNES 207
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 72 KISRVKSECTRLVVNLKSSWEKS 4
KI++++ T LVVN+K S +S
Sbjct: 185 KINKIEEHDTVLVVNIKKSGNES 207
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 72 KISRVKSECTRLVVNLKSSWEKS 4
KI++++ T LVVN+K S +S
Sbjct: 185 KINKIEEHDTVLVVNIKKSGNES 207
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 72 KISRVKSECTRLVVNLKSSWEKS 4
KI++++ T LVVN+K S +S
Sbjct: 185 KINKIEEHDTVLVVNIKKSGNES 207
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 72 KISRVKSECTRLVVNLKSSWEKS 4
KI++++ T LVVN+K S +S
Sbjct: 185 KINKIEEHDTVLVVNIKKSGNES 207
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 72 KISRVKSECTRLVVNLKSSWEKS 4
KI++++ T LVVN+K S +S
Sbjct: 174 KINKIEEHDTVLVVNIKKSGNES 196
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 72 KISRVKSECTRLVVNLKSSWEKS 4
KI++++ T LVVN+K S +S
Sbjct: 185 KINKIEEHDTVLVVNIKKSGNES 207
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 72 KISRVKSECTRLVVNLKSSWEKS 4
KI++++ T LVVN+K S +S
Sbjct: 185 KINKIEEHDTVLVVNIKKSGNES 207
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 72 KISRVKSECTRLVVNLKSSWEKS 4
KI++++ T LVVN+K S +S
Sbjct: 185 KINKIEEHDTVLVVNIKKSGNES 207
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 72 KISRVKSECTRLVVNLKSSWEKS 4
KI++++ T LVVN+K S +S
Sbjct: 185 KINKIEEHDTVLVVNIKKSGNES 207
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.0 bits (47), Expect = 3.7
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Frame = +2
Query: 749 WTAGDPHNNREL---RRIVSRGTEPLSPXPLAEXR 844
W+ D H ++ RR++ GT L P P A R
Sbjct: 64 WSTADGHPVNDVPGVRRVLRNGTLVLLPFPAAAFR 98
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.0 bits (47), Expect = 3.7
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Frame = +2
Query: 749 WTAGDPHNNREL---RRIVSRGTEPLSPXPLAEXR 844
W+ D H ++ RR++ GT L P P A R
Sbjct: 64 WSTADGHPVNDVPGVRRVLRNGTLVLLPFPAAAFR 98
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 22.2 bits (45), Expect = 6.5
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -3
Query: 448 EVHVVNTNHLLQKIRSFN 395
E ++VNTN+ + +R +N
Sbjct: 198 ETYIVNTNYSSKNMREYN 215
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 8.5
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = +1
Query: 247 VPLRNGDGRVREEVPELSSDTCGPGLLHHGRQLVFGRLPEG 369
+P GDGR E + + D C + +H RL G
Sbjct: 201 MPTLKGDGRHMEVIKIKNFDNCDQRINYHFGMTDNSRLEPG 241
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 236,245
Number of Sequences: 438
Number of extensions: 5372
Number of successful extensions: 24
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -