Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_FL5_F21
(1178 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 38 0.010
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 38 0.010
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 38 0.010
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.69
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.69
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.69
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 28 1.2
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.2
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 3.7
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 3.7
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 3.7
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 4.8
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 4.8
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 4.8
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 4.8
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 4.8
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 6.4
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 6.4
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 6.4
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 8.4
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 8.4
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 38.3 bits (85), Expect = 0.010
Identities = 22/54 (40%), Positives = 22/54 (40%)
Frame = +3
Query: 654 PPXPXXXGXXPPXXFFFXXXXGRXPXPPXGGXXXXPPPPXGGXFX*KXGXRPPP 815
PP P G PP P PP GG PPPP G F K G PPP
Sbjct: 742 PPPPPPPGGLPPIS-----GGPPPPPPPPGGCPPPPPPPPPGGF--KGGPPPPP 788
Score = 37.1 bits (82), Expect = 0.024
Identities = 22/71 (30%), Positives = 22/71 (30%)
Frame = +2
Query: 653 PPXPXXXGGXPPXXXFFXXXXXAAXXPPXGGXXXPPPPPXXGXXXXKXXXXPPXPXXXRX 832
PP P GG PP PP G PPPPP G PP P
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG------CPPPPPPPPPGG 779
Query: 833 XXXXXXXPXPP 865
P PP
Sbjct: 780 FKGGPPPPPPP 790
Score = 33.9 bits (74), Expect = 0.22
Identities = 22/70 (31%), Positives = 22/70 (31%), Gaps = 5/70 (7%)
Frame = +3
Query: 663 PXXXGXXPPXXFFFXXXXGRXPXPPXGG-----XXXXPPPPXGGXFX*KXGXRPPPXXXX 827
P G PP G P PP GG PPPP GG G PPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Query: 828 XXXXXXXPXP 857
P P
Sbjct: 767 GCPPPPPPPP 776
Score = 33.1 bits (72), Expect = 0.39
Identities = 21/67 (31%), Positives = 21/67 (31%), Gaps = 5/67 (7%)
Frame = +1
Query: 676 GXXPPXXFFFXXXXGGXPXPXXGG-----GXPXPPPPXGGXLXKKXXXAPXPXXXXXXXX 840
G PP G P P GG G P PPPP GG P P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 841 XXXXPPP 861
PPP
Sbjct: 771 PPPPPPP 777
Score = 31.1 bits (67), Expect = 1.6
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +3
Query: 732 PPXGGXXXXPPPPXGGXFX*KXGXRPPPXXXXXXXXXXXPXPXXPXP 872
PP G PPPP GG G PPP P P P P
Sbjct: 720 PPITGGPPPPPPP-GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 38.3 bits (85), Expect = 0.010
Identities = 22/54 (40%), Positives = 22/54 (40%)
Frame = +3
Query: 654 PPXPXXXGXXPPXXFFFXXXXGRXPXPPXGGXXXXPPPPXGGXFX*KXGXRPPP 815
PP P G PP P PP GG PPPP G F K G PPP
Sbjct: 742 PPPPPPPGGLPPIS-----GGPPPPPPPPGGCPPPPPPPPPGGF--KGGPPPPP 788
Score = 37.1 bits (82), Expect = 0.024
Identities = 22/71 (30%), Positives = 22/71 (30%)
Frame = +2
Query: 653 PPXPXXXGGXPPXXXFFXXXXXAAXXPPXGGXXXPPPPPXXGXXXXKXXXXPPXPXXXRX 832
PP P GG PP PP G PPPPP G PP P
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG------CPPPPPPPPPGG 779
Query: 833 XXXXXXXPXPP 865
P PP
Sbjct: 780 FKGGPPPPPPP 790
Score = 33.9 bits (74), Expect = 0.22
Identities = 22/70 (31%), Positives = 22/70 (31%), Gaps = 5/70 (7%)
Frame = +3
Query: 663 PXXXGXXPPXXFFFXXXXGRXPXPPXGG-----XXXXPPPPXGGXFX*KXGXRPPPXXXX 827
P G PP G P PP GG PPPP GG G PPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Query: 828 XXXXXXXPXP 857
P P
Sbjct: 767 GCPPPPPPPP 776
Score = 33.1 bits (72), Expect = 0.39
Identities = 21/67 (31%), Positives = 21/67 (31%), Gaps = 5/67 (7%)
Frame = +1
Query: 676 GXXPPXXFFFXXXXGGXPXPXXGG-----GXPXPPPPXGGXLXKKXXXAPXPXXXXXXXX 840
G PP G P P GG G P PPPP GG P P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 841 XXXXPPP 861
PPP
Sbjct: 771 PPPPPPP 777
Score = 31.1 bits (67), Expect = 1.6
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +3
Query: 732 PPXGGXXXXPPPPXGGXFX*KXGXRPPPXXXXXXXXXXXPXPXXPXP 872
PP G PPPP GG G PPP P P P P
Sbjct: 720 PPITGGPPPPPPP-GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 38.3 bits (85), Expect = 0.010
Identities = 22/54 (40%), Positives = 22/54 (40%)
Frame = +3
Query: 654 PPXPXXXGXXPPXXFFFXXXXGRXPXPPXGGXXXXPPPPXGGXFX*KXGXRPPP 815
PP P G PP P PP GG PPPP G F K G PPP
Sbjct: 325 PPPPPPPGGLPPIS-----GGPPPPPPPPGGCPPPPPPPPPGGF--KGGPPPPP 371
Score = 37.1 bits (82), Expect = 0.024
Identities = 22/71 (30%), Positives = 22/71 (30%)
Frame = +2
Query: 653 PPXPXXXGGXPPXXXFFXXXXXAAXXPPXGGXXXPPPPPXXGXXXXKXXXXPPXPXXXRX 832
PP P GG PP PP G PPPPP G PP P
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG------CPPPPPPPPPGG 362
Query: 833 XXXXXXXPXPP 865
P PP
Sbjct: 363 FKGGPPPPPPP 373
Score = 33.9 bits (74), Expect = 0.22
Identities = 22/70 (31%), Positives = 22/70 (31%), Gaps = 5/70 (7%)
Frame = +3
Query: 663 PXXXGXXPPXXFFFXXXXGRXPXPPXGG-----XXXXPPPPXGGXFX*KXGXRPPPXXXX 827
P G PP G P PP GG PPPP GG G PPP
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 349
Query: 828 XXXXXXXPXP 857
P P
Sbjct: 350 GCPPPPPPPP 359
Score = 33.1 bits (72), Expect = 0.39
Identities = 21/67 (31%), Positives = 21/67 (31%), Gaps = 5/67 (7%)
Frame = +1
Query: 676 GXXPPXXFFFXXXXGGXPXPXXGG-----GXPXPPPPXGGXLXKKXXXAPXPXXXXXXXX 840
G PP G P P GG G P PPPP GG P P
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 353
Query: 841 XXXXPPP 861
PPP
Sbjct: 354 PPPPPPP 360
Score = 31.1 bits (67), Expect = 1.6
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +3
Query: 732 PPXGGXXXXPPPPXGGXFX*KXGXRPPPXXXXXXXXXXXPXPXXPXP 872
PP G PPPP GG G PPP P P P P
Sbjct: 303 PPITGGPPPPPPP-GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 348
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.3 bits (70), Expect = 0.69
Identities = 21/70 (30%), Positives = 22/70 (31%)
Frame = +2
Query: 653 PPXPXXXGGXPPXXXFFXXXXXAAXXPPXGGXXXPPPPPXXGXXXXKXXXXPPXPXXXRX 832
PP P G PP + PP G PPPPP G PP P R
Sbjct: 255 PPPPPAAGSPPP------PRTGSPPPPPTGS---PPPPPAGGSPPPPRAGSPPPPPPPRG 305
Query: 833 XXXXXXXPXP 862
P P
Sbjct: 306 SPPTGSLPPP 315
Score = 31.1 bits (67), Expect = 1.6
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +2
Query: 653 PPXPXXXGGXPPXXXFFXXXXXAAXXPPXGGXXXPPPPP 769
PP P G PP A PP G PPPPP
Sbjct: 297 PPPPPPPRGSPPTGSL--PPPQAGGSPPPAGTGSPPPPP 333
Score = 30.7 bits (66), Expect = 2.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 731 PPXGGXXXPPPPPXXGXXXXKXXXXPPXP 817
PP G PPPPP G PP P
Sbjct: 247 PPLAGSGSPPPPPAAGSPPPPRTGSPPPP 275
Score = 30.7 bits (66), Expect = 2.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 718 GGXPXPXXGGGXPXPPPPXG 777
GG P P G P PPPP G
Sbjct: 286 GGSPPPPRAGSPPPPPPPRG 305
Score = 30.3 bits (65), Expect = 2.8
Identities = 18/70 (25%), Positives = 18/70 (25%)
Frame = +2
Query: 656 PXPXXXGGXPPXXXFFXXXXXAAXXPPXGGXXXPPPPPXXGXXXXKXXXXPPXPXXXRXX 835
P P G PP A PP PPPPP PP
Sbjct: 264 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 323
Query: 836 XXXXXXPXPP 865
P PP
Sbjct: 324 AGTGSPPPPP 333
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.3 bits (70), Expect = 0.69
Identities = 21/70 (30%), Positives = 22/70 (31%)
Frame = +2
Query: 653 PPXPXXXGGXPPXXXFFXXXXXAAXXPPXGGXXXPPPPPXXGXXXXKXXXXPPXPXXXRX 832
PP P G PP + PP G PPPPP G PP P R
Sbjct: 276 PPPPPAAGSPPP------PRTGSPPPPPTGS---PPPPPAGGSPPPPRAGSPPPPPPPRG 326
Query: 833 XXXXXXXPXP 862
P P
Sbjct: 327 SPPTGSLPPP 336
Score = 31.1 bits (67), Expect = 1.6
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +2
Query: 653 PPXPXXXGGXPPXXXFFXXXXXAAXXPPXGGXXXPPPPP 769
PP P G PP A PP G PPPPP
Sbjct: 318 PPPPPPPRGSPPTGSL--PPPQAGGSPPPAGTGSPPPPP 354
Score = 30.7 bits (66), Expect = 2.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 731 PPXGGXXXPPPPPXXGXXXXKXXXXPPXP 817
PP G PPPPP G PP P
Sbjct: 268 PPLAGSGSPPPPPAAGSPPPPRTGSPPPP 296
Score = 30.7 bits (66), Expect = 2.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 718 GGXPXPXXGGGXPXPPPPXG 777
GG P P G P PPPP G
Sbjct: 307 GGSPPPPRAGSPPPPPPPRG 326
Score = 30.3 bits (65), Expect = 2.8
Identities = 18/70 (25%), Positives = 18/70 (25%)
Frame = +2
Query: 656 PXPXXXGGXPPXXXFFXXXXXAAXXPPXGGXXXPPPPPXXGXXXXKXXXXPPXPXXXRXX 835
P P G PP A PP PPPPP PP
Sbjct: 285 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 344
Query: 836 XXXXXXPXPP 865
P PP
Sbjct: 345 AGTGSPPPPP 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.3 bits (70), Expect = 0.69
Identities = 21/70 (30%), Positives = 22/70 (31%)
Frame = +2
Query: 653 PPXPXXXGGXPPXXXFFXXXXXAAXXPPXGGXXXPPPPPXXGXXXXKXXXXPPXPXXXRX 832
PP P G PP + PP G PPPPP G PP P R
Sbjct: 261 PPPPPAAGSPPP------PRTGSPPPPPTGS---PPPPPAGGSPPPPRAGSPPPPPPPRG 311
Query: 833 XXXXXXXPXP 862
P P
Sbjct: 312 SPPTGSLPPP 321
Score = 31.1 bits (67), Expect = 1.6
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +2
Query: 653 PPXPXXXGGXPPXXXFFXXXXXAAXXPPXGGXXXPPPPP 769
PP P G PP A PP G PPPPP
Sbjct: 303 PPPPPPPRGSPPTGSL--PPPQAGGSPPPAGTGSPPPPP 339
Score = 30.7 bits (66), Expect = 2.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 731 PPXGGXXXPPPPPXXGXXXXKXXXXPPXP 817
PP G PPPPP G PP P
Sbjct: 253 PPLAGSGSPPPPPAAGSPPPPRTGSPPPP 281
Score = 30.7 bits (66), Expect = 2.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 718 GGXPXPXXGGGXPXPPPPXG 777
GG P P G P PPPP G
Sbjct: 292 GGSPPPPRAGSPPPPPPPRG 311
Score = 30.3 bits (65), Expect = 2.8
Identities = 18/70 (25%), Positives = 18/70 (25%)
Frame = +2
Query: 656 PXPXXXGGXPPXXXFFXXXXXAAXXPPXGGXXXPPPPPXXGXXXXKXXXXPPXPXXXRXX 835
P P G PP A PP PPPPP PP
Sbjct: 270 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 329
Query: 836 XXXXXXPXPP 865
P PP
Sbjct: 330 AGTGSPPPPP 339
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 27.9 bits (59), Expect(2) = 1.2
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -1
Query: 776 PXGGGGXGXPPPXXGXGXPPXXXXKKKXXGGXXP 675
P G GG G PPP G G P + GG P
Sbjct: 403 PGGPGGYGPPPPG-GPGAPGSYGPPQGGPGGFGP 435
Score = 22.2 bits (45), Expect(2) = 1.2
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -1
Query: 566 GXXPXXXXXKKXPPPXXFPPPG 501
G P PPP FPP G
Sbjct: 434 GPPPPGGPGAYGPPPTGFPPVG 455
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.5 bits (68), Expect = 1.2
Identities = 22/76 (28%), Positives = 22/76 (28%), Gaps = 3/76 (3%)
Frame = +3
Query: 654 PPXPXXXGXXPPXXFFFXXXXGRXPXPPXGGXXXXPPPPXGGXF---X*KXGXRPPPXXX 824
PP P PP R P PP G PPPP G G PPP
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPS 323
Query: 825 XXXXXXXXPXPXXPXP 872
P P P
Sbjct: 324 RFGPPGMGGMPPPPPP 339
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.5 bits (68), Expect = 1.2
Identities = 22/76 (28%), Positives = 22/76 (28%), Gaps = 3/76 (3%)
Frame = +3
Query: 654 PPXPXXXGXXPPXXFFFXXXXGRXPXPPXGGXXXXPPPPXGGXF---X*KXGXRPPPXXX 824
PP P PP R P PP G PPPP G G PPP
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPS 333
Query: 825 XXXXXXXXPXPXXPXP 872
P P P
Sbjct: 334 RFGPPGMGGMPPPPPP 349
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.9 bits (64), Expect = 3.7
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +1
Query: 649 PXPXXXXXXGXXPPXXFFFXXXXGGXPXPXXGGGXPXPPPPXGG 780
P P G PP GG P P G P PPPP G
Sbjct: 84 PPPPPMFAGGIPPPPPMM-----GGIPPPPPMFGAPPPPPPPSG 122
Score = 29.9 bits (64), Expect = 3.7
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +2
Query: 653 PPXPXXXGGXPPXXXFFXXXXXAAXXPPXGGXXXPPPPPXXGXXXXKXXXXPPXP 817
PP P GG PP PP PPPPP G P P
Sbjct: 85 PPPPMFAGGIPPPPPMMG----GIPPPPPMFGAPPPPPPPSGLGVAPQPPRPKTP 135
Score = 29.1 bits (62), Expect = 6.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 779 PPXGGGGXGXPPPXXGXGXPP 717
PP G GG PPP G PP
Sbjct: 76 PPPGPGGIPPPPPMFAGGIPP 96
Score = 28.7 bits (61), Expect = 8.4
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +2
Query: 650 LPPXPXXXGGXPPXXXFFXXXXXAAXXPPXGGXXXPPPPP 769
+PP P GG PP F PP G P PP
Sbjct: 94 IPPPPPMMGGIPPPPPMF---GAPPPPPPPSGLGVAPQPP 130
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.9 bits (64), Expect = 3.7
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = +3
Query: 654 PPXPXXXGXXPPXXFFFXXXXGRXPXPPXGGXXXXPPPPXGGXFX*KXGXRPPP 815
PP P G P F P PP GG PPPP G PPP
Sbjct: 756 PPPPFGRGAGPMSSF---------PPPPRGGMHHMPPPPSFRGGRGGHGGPPPP 800
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.9 bits (64), Expect = 3.7
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +1
Query: 727 PXPXXGGGXPXPPPPXGGXL 786
P P GG P PPPP GG +
Sbjct: 581 PPPPMLGGPPPPPPPPGGLM 600
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.5 bits (63), Expect = 4.8
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 754 PXPPPPXGGXLXKKXXXAPXPXXXXXXXXXXXXPPP 861
P PPPP GG AP P PPP
Sbjct: 216 PAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPP 251
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.5 bits (63), Expect = 4.8
Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 7/68 (10%)
Frame = +2
Query: 683 PPXXXFFXXXXXAAXXPPXG-----GXXXP--PPPPXXGXXXXKXXXXPPXPXXXRXXXX 841
PP FF PP G P PPPP G + PP P R
Sbjct: 290 PPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPY 349
Query: 842 XXXXPXPP 865
P PP
Sbjct: 350 PPFFPPPP 357
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.5 bits (63), Expect = 4.8
Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 7/68 (10%)
Frame = +2
Query: 683 PPXXXFFXXXXXAAXXPPXG-----GXXXP--PPPPXXGXXXXKXXXXPPXPXXXRXXXX 841
PP FF PP G P PPPP G + PP P R
Sbjct: 290 PPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPY 349
Query: 842 XXXXPXPP 865
P PP
Sbjct: 350 PPFFPPPP 357
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.5 bits (63), Expect = 4.8
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 754 PXPPPPXGGXLXKKXXXAPXPXXXXXXXXXXXXPPP 861
P PPPP GG AP P PPP
Sbjct: 202 PAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPP 237
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.5 bits (63), Expect = 4.8
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 754 PXPPPPXGGXLXKKXXXAPXPXXXXXXXXXXXXPPP 861
P PPPP GG AP P PPP
Sbjct: 202 PAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPP 237
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 29.1 bits (62), Expect = 6.4
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -1
Query: 509 PPGGXXXXPPXXGXXQXXXKKKXGGXGGXKXXFFXENPGGGGVPP 375
PP G PP G GG GG PG GG PP
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAP--GGGGGMYPPLIPTRPGPGGPPP 824
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 29.1 bits (62), Expect = 6.4
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -1
Query: 509 PPGGXXXXPPXXGXXQXXXKKKXGGXGGXKXXFFXENPGGGGVPP 375
PP G PP G GG GG PG GG PP
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAP--GGGGGMYPPLIPTRPGPGGPPP 824
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 6.4
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +1
Query: 676 GXXPPXXFFFXXXXGGXPXPXXGGGXPXPPPPXGGXLXKKXXXAPXP 816
G PP GG P P G PPP GG + P P
Sbjct: 1557 GGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGP 1603
Score = 28.7 bits (61), Expect = 8.4
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 721 GXPXPXXGGGXPXPPPPXGG 780
G P P G P PPPP GG
Sbjct: 1590 GGPPPRLGMPPPGPPPPNGG 1609
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 28.7 bits (61), Expect = 8.4
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -1
Query: 776 PXGGGGXGXPPPXXGXGXPPXXXXKKKXXGG 684
P G GG G PP G G PP GG
Sbjct: 183 PPGHGGQGGPPGHGGMGGPPPGQGGPGGPGG 213
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 28.7 bits (61), Expect = 8.4
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -1
Query: 776 PXGGGGXGXPPPXXGXGXPPXXXXKKKXXGG 684
P G GG G PP G G PP GG
Sbjct: 463 PPGHGGQGGPPGHGGMGGPPPGQGGPGGPGG 493
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.154 0.541
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,173,090
Number of Sequences: 27780
Number of extensions: 267597
Number of successful extensions: 1404
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3224247522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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