Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_FL5_F16
(884 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 50 3e-08
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 48 9e-08
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 48 2e-07
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 47 2e-07
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 46 5e-07
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 46 5e-07
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 46 6e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 45 1e-06
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 45 1e-06
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 44 1e-06
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 44 1e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 43 3e-06
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 43 3e-06
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 40 4e-05
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 39 5e-05
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 37 2e-04
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 36 4e-04
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 36 7e-04
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 36 7e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 34 0.002
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 34 0.002
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 33 0.003
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 33 0.003
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 33 0.003
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 31 0.019
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 28 0.100
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 25 0.70
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 25 0.70
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 25 0.70
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 25 0.70
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 22 6.5
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 8.6
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 8.6
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 50.0 bits (114), Expect = 3e-08
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 9/104 (8%)
Frame = +2
Query: 332 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDXWPNDM 499
+++W+PD+VL N A G+Y +R + + NG V W+ + ++ + +P D
Sbjct: 106 DKVWKPDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQ 162
Query: 500 QTCTFKFGSRMHXSDXMDFVIDXR-----IYSMFESGXWDVTDL 616
QTC KFGS D + + + ++SG WD+ ++
Sbjct: 163 QTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDIINV 206
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 48.4 bits (110), Expect = 9e-08
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 499
+ RLW+PDV++ N+A G Y V NNG+ ++ + + + +P D
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 500 QTCTFKFGSRMHXSDXMDFVIDXR----IYSMFESGXWDV 607
Q C KFGS + +D + I S +G WD+
Sbjct: 160 QRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNGEWDL 199
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 47.6 bits (108), Expect = 2e-07
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 499
V S+ +WRPD+VL N A A +A + + G V W + + ++ +P D
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDE 164
Query: 500 QTCTFKFGS 526
QTC KFGS
Sbjct: 165 QTCVLKFGS 173
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 47.2 bits (107), Expect = 2e-07
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 499
V S+ +WRPD+VL N A A +A ++ G V W + + ++ +P D
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDE 160
Query: 500 QTCTFKFGS 526
QTC KFGS
Sbjct: 161 QTCVMKFGS 169
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 46.0 bits (104), Expect = 5e-07
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 499
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 500 QTCTFKFGSRMHXSDXMDFVI 562
Q C KFGS + + +D V+
Sbjct: 191 QHCDMKFGSWTYDGNQVDLVL 211
Score = 23.4 bits (48), Expect = 2.8
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +1
Query: 253 LQMNWIDKRLSWNAGGMG 306
L++ W+D L WN G
Sbjct: 107 LKLEWVDYNLQWNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 46.0 bits (104), Expect = 5e-07
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 499
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 500 QTCTFKFGSRMHXSDXMDFVI 562
Q C KFGS + + +D V+
Sbjct: 191 QHCDMKFGSWTYDGNQVDLVL 211
Score = 23.4 bits (48), Expect = 2.8
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +1
Query: 253 LQMNWIDKRLSWNAGGMG 306
L++ W+D L WN G
Sbjct: 107 LKLEWVDYNLQWNESEYG 124
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 499
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 500 QTCTFKFGSRMHXSDXMDFVI 562
Q C KFGS + + +D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 23.4 bits (48), Expect = 2.8
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +1
Query: 253 LQMNWIDKRLSWNAGGMG 306
L++ W+D L WN G
Sbjct: 39 LKLEWVDYNLQWNESEYG 56
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 45.6 bits (103), Expect = 6e-07
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDXWP 490
V S+ +WRPD+VL N A G+Y + +A V +G V W + S+ ++ +P
Sbjct: 105 VPSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFP 161
Query: 491 NDMQTCTFKFGS 526
D+QTC K GS
Sbjct: 162 YDVQTCVLKLGS 173
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 44.8 bits (101), Expect = 1e-06
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 499
++ +LW+PD+++ N+A G Y V+++GS ++ + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDD 122
Query: 500 QTCTFKFGSRMHXSDXMDFVI 562
Q C KFGS + + +D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 23.4 bits (48), Expect = 2.8
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +1
Query: 253 LQMNWIDKRLSWNAGGMG 306
L++ W+D L WN G
Sbjct: 39 LKLEWVDYNLQWNESEYG 56
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 44.8 bits (101), Expect = 1e-06
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +2
Query: 299 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPISM 472
E+G T L V SE +W PD+VL N A G + +A + G V W + +
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEI 147
Query: 473 QLDXWPNDMQTCTFKFGS 526
+ +P D QTC KFGS
Sbjct: 148 DVRYFPFDQQTCFMKFGS 165
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 44.4 bits (100), Expect = 1e-06
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 499
++ +LW+PD+++ N+A G Y V+++GS ++ + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDD 122
Query: 500 QTCTFKFGSRMHXSDXMDFVI 562
Q C KFGS + + +D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 23.4 bits (48), Expect = 2.8
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +1
Query: 253 LQMNWIDKRLSWNAGGMG 306
L++ W+D L WN G
Sbjct: 39 LKLEWVDYNLQWNESEYG 56
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 44.4 bits (100), Expect = 1e-06
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +2
Query: 305 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 472
G V SE +W PD+VL N A G+Y + +A + G VSW + +
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPPAIYKSSCEI 160
Query: 473 QLDXWPNDMQTCTFKFGSRMHXSDXMD 553
++ +P D Q+C KFGS + +D
Sbjct: 161 NVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 43.6 bits (98), Expect = 2e-06
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 499
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 500 QTCTFKFGSRMHXSDXMDFVI 562
Q C KFGS + + +D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 23.4 bits (48), Expect = 2.8
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +1
Query: 253 LQMNWIDKRLSWNAGGMG 306
L++ W+D L WN G
Sbjct: 39 LKLEWVDYNLQWNESEYG 56
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 499
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDD 122
Query: 500 QTCTFKFGSRMHXSDXMDFVI 562
Q C KFGS + + +D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 23.4 bits (48), Expect = 2.8
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +1
Query: 253 LQMNWIDKRLSWNAGGMG 306
L++ W+D L WN G
Sbjct: 39 LKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 499
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDD 122
Query: 500 QTCTFKFGSRMHXSDXMDFVI 562
Q C KFGS + + +D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 23.4 bits (48), Expect = 2.8
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +1
Query: 253 LQMNWIDKRLSWNAGGMG 306
L++ W+D L WN G
Sbjct: 39 LKLEWVDYNLQWNESEYG 56
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 43.2 bits (97), Expect = 3e-06
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPN 493
V S+ +W PD+ + N+ T G V ++GSVS + + + WP
Sbjct: 119 VKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPY 178
Query: 494 DMQTCTFKFGSRMHXSDXMDFVIDXRIYSM 583
D C FGS +H + ++ +D + + M
Sbjct: 179 DTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 43.2 bits (97), Expect = 3e-06
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +2
Query: 305 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 472
G T V SE +W PD+VL N A G+Y + +A + + G V W + +
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEI 147
Query: 473 QLDXWPNDMQTCTFKFGS 526
++ +P D QTC KFGS
Sbjct: 148 DVEYFPFDEQTCFMKFGS 165
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 39.5 bits (88), Expect = 4e-05
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +2
Query: 332 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQ 502
ER+WRPD N + + R+S +G + + RL I M+L +P D Q
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQ 174
Query: 503 TCTFKFGS 526
+C GS
Sbjct: 175 SCPLILGS 182
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 39.1 bits (87), Expect = 5e-05
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDISTPISMQLDXWPND 496
V R+WRPD +L N A + V S+ G V W+ + + ++ +P D
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFD 141
Query: 497 MQTCTFKFGS 526
Q C K+ S
Sbjct: 142 EQRCVLKWAS 151
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 37.1 bits (82), Expect = 2e-04
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = +2
Query: 335 RLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQT 505
R+W+PD N + T R+ +G V + RL I M L+ +P D Q
Sbjct: 84 RIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQR 143
Query: 506 CTFKFGS 526
C +FGS
Sbjct: 144 CPLQFGS 150
Score = 29.9 bits (64), Expect = 0.033
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +1
Query: 100 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRGSESTVRILADLQMNW 267
N +++S ++D+LL YD PD V + + +R I + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 268 IDKRLSWNAG 297
+D+RL++ G
Sbjct: 62 VDRRLAFQGG 71
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 36.3 bits (80), Expect = 4e-04
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +2
Query: 329 SERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 499
+E++W PD N + D R R+S +GSV++ R + M L +P D
Sbjct: 113 AEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDS 172
Query: 500 QTCTFKFGS 526
Q CT + S
Sbjct: 173 QNCTVEIES 181
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 35.5 bits (78), Expect = 7e-04
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = +2
Query: 320 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDXWP 490
L + R+W PD+ N + + R+ NGSV + R+ ++ M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 491 NDMQTCTFKFGSRMHXSDXMDFV 559
D Q C+ + S +D + F+
Sbjct: 169 LDRQVCSLRMASYGWTTDDLVFL 191
Score = 25.0 bits (52), Expect = 0.93
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Frame = +1
Query: 121 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRGSESTVRILADLQMNWIDKR 279
++D++L YD E+ D VV + + +R + I + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 280 LSWNAGGMGLQHL 318
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 35.5 bits (78), Expect = 7e-04
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = +2
Query: 320 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDXWP 490
L + R+W PD+ N + + R+ NGSV + R+ ++ M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 491 NDMQTCTFKFGSRMHXSDXMDFV 559
D Q C+ + S +D + F+
Sbjct: 169 LDRQVCSLRMASYGWTTDDLVFL 191
Score = 27.9 bits (59), Expect = 0.13
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Frame = +1
Query: 121 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRGSESTVRILADLQMNWIDKR 279
++D++L YD E+ D +V + L +R A I + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 280 LSWNAGGMGLQHL 318
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 34.3 bits (75), Expect = 0.002
Identities = 16/77 (20%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +2
Query: 338 LWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDXWPNDMQTC 508
+WRPD NA T + ++ + ++ ++ ++ +L + +M+ + +P+D Q C
Sbjct: 87 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQIC 146
Query: 509 TFKFGSRMHXSDXMDFV 559
+ S H + + F+
Sbjct: 147 SMMIESLSHTTQDLVFI 163
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 33.9 bits (74), Expect = 0.002
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +2
Query: 332 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDXWPNDMQ 502
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 503 TCTFKFGSRMHXSDXMDFVID 565
C + S H +D M F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 33.1 bits (72), Expect = 0.003
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
Frame = +2
Query: 305 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 457
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 458 TPISMQLDXWPNDMQTCTFKFGS 526
M L +P D Q C + S
Sbjct: 136 ASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 33.1 bits (72), Expect = 0.003
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
Frame = +2
Query: 305 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 457
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 458 TPISMQLDXWPNDMQTCTFKFGS 526
M L +P D Q C + S
Sbjct: 136 ASCPMNLQYFPMDRQLCHIEIES 158
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 33.1 bits (72), Expect = 0.003
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
Frame = +2
Query: 305 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 457
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 18 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 74
Query: 458 TPISMQLDXWPNDMQTCTFKFGS 526
M L +P D Q C + S
Sbjct: 75 ASCPMNLQYFPMDRQLCHIEIES 97
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 30.7 bits (66), Expect = 0.019
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = +1
Query: 94 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRGSESTVRILADLQ 258
C++ TS S + L YDR+ P+ K ++ L ++H N+ TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 259 MNWIDKRLSWNA 294
+ W L+W +
Sbjct: 88 LMWEQSHLTWKS 99
Score = 29.5 bits (63), Expect = 0.043
Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +2
Query: 323 VSSERLWRPDVVLLNAAATTAGDY---ALRARVSNNGSVSWIKRLDISTPISMQLDXWPN 493
V S +W PD+V+ ++ + D ++ V N+G++ + + WP
Sbjct: 110 VKSYEIWVPDIVM-HSVTSVGIDLEMPSVECIVFNSGTILCVPFTTYTPVCEYDHTWWPY 168
Query: 494 DMQTCTFKFGSRMHXSD 544
D+ CT S H S+
Sbjct: 169 DILNCTIHIASWSHGSN 185
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 28.3 bits (60), Expect = 0.100
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = +2
Query: 332 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDXWPND 496
+ LW+PD LNA + AL + S+ N +V + R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 497 MQTC 508
+Q C
Sbjct: 127 IQIC 130
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 25.4 bits (53), Expect = 0.70
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +2
Query: 407 RVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTFKFGSRMHXSDXMDFV 559
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 25.4 bits (53), Expect = 0.70
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +2
Query: 407 RVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTFKFGSRMHXSDXMDFV 559
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 25.4 bits (53), Expect = 0.70
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +2
Query: 407 RVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTFKFGSRMHXSDXMDFV 559
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 218 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 268
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 25.4 bits (53), Expect = 0.70
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +2
Query: 407 RVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTFKFGSRMHXSDXMDFV 559
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 22.2 bits (45), Expect = 6.5
Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +1
Query: 154 ESPPDSKIVVNLTLHLRHANIRGSESTVRILADLQMNWIDKRLSWNAGGMGLQHLAGVL- 330
E + ++N L + + + ++ + D + N + + S AGG+ + AG++
Sbjct: 233 EGDDQQRAIINTLLSISASCVIAFATSALVSKDSKFNMVHIQNSTLAGGVAIGTAAGMMC 292
Query: 331 ---GTLV 342
GTL+
Sbjct: 293 QPVGTLI 299
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 8.6
Identities = 12/38 (31%), Positives = 13/38 (34%)
Frame = +3
Query: 618 PVXXQEPXTGGEVXASRGHVPDCLFPGXXPXQTXWRPA 731
P EP + E S G DC G P W A
Sbjct: 30 PSFVMEPPSRVEFSNSSGAWLDCTATGSPPLNIDWSTA 67
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 8.6
Identities = 12/38 (31%), Positives = 13/38 (34%)
Frame = +3
Query: 618 PVXXQEPXTGGEVXASRGHVPDCLFPGXXPXQTXWRPA 731
P EP + E S G DC G P W A
Sbjct: 30 PSFVMEPPSRVEFSNSSGAWLDCTATGSPPLNIDWSTA 67
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,933
Number of Sequences: 438
Number of extensions: 4738
Number of successful extensions: 80
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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