Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_FL5_F13
         (848 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92803-7|CAB07244.1|  445|Caenorhabditis elegans Hypothetical pr...   263   1e-70

>Z92803-7|CAB07244.1|  445|Caenorhabditis elegans Hypothetical
           protein K01G5.5 protein.
          Length = 445

 Score =  263 bits (645), Expect = 1e-70
 Identities = 128/219 (58%), Positives = 153/219 (69%), Gaps = 2/219 (0%)
 Frame = +3

Query: 192 LSEKKKKKNKDGVSLGAFQTIGDFKIEPSESVKKLDTAYWPLLLKNFDRLNVRTNHYTPL 371
           + +K K+   +G  L   Q  G F++  S    KLD + WPLLLKN+D+LNVRTNHYTP 
Sbjct: 1   MGKKDKRSKLEGDDLAEAQQKGSFQLPSSNETAKLDASQWPLLLKNYDKLNVRTNHYTPH 60

Query: 372 PFGNSPLKRPISDYVKSGFINVDKPSNPSSHEVVSWIKRILKVEKTGHSGTLDPKVTGCL 551
             G SPLKR I +Y+ SGF N+DKPSNPSSHEVVSWIKRIL+ EKTGHSGTLDPKV+GCL
Sbjct: 61  VEGVSPLKRDIKNYISSGFFNLDKPSNPSSHEVVSWIKRILRCEKTGHSGTLDPKVSGCL 120

Query: 552 IVCIDRATRLVKSQQNAGKEYVAVFNLHSAVXNIQKVTQGLXKLRGALFXXXPLISXVKR 731
           IVCIDR TRL KSQQ AGKEY+ +F LH  V + +KV Q L KL GALF   PLIS VKR
Sbjct: 121 IVCIDRTTRLAKSQQGAGKEYICIFKLHEEVEDDRKVKQALEKLTGALFQRPPLISAVKR 180

Query: 732 QLRVRTVYDSNSWIR--XGQNIGVSGXIAXLDRFPDXVC 842
           QLR+RTVY+ N +I     Q +G+   I     +   +C
Sbjct: 181 QLRIRTVYE-NKFIEYDPAQQMGIFNCICESGTYVRTIC 218


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,549,965
Number of Sequences: 27780
Number of extensions: 414982
Number of successful extensions: 1075
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)