Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_FL5_F12
         (1169 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_03_0005 + 11568545-11569119,11569179-11569191                       32   1.0  
09_06_0172 + 21329904-21331512,21331595-21331740,21332333-213325...    31   1.3  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    31   1.8  
09_04_0011 + 13703564-13703766,13704685-13705526,13705628-137057...    29   5.4  
05_01_0141 - 937428-937717,938483-938705                               29   7.1  
07_03_1136 + 24218601-24218734,24218769-24219906                       29   9.4  
02_04_0563 - 23895573-23895614,23896330-23896390,23896901-238970...    29   9.4  
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329...    29   9.4  

>01_03_0005 + 11568545-11569119,11569179-11569191
          Length = 195

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 17/41 (41%), Positives = 18/41 (43%)
 Frame = +2

Query: 482 GGXXXXPPPXGGKXXGGGXFFXKKXGGXAPXTXPXXFFFSP 604
           GG    PPP GG   GGG +     GG A  T P    F P
Sbjct: 108 GGGIYYPPPTGGGGGGGGGWQQGGGGGGAYPTPPPPNPFLP 148


>09_06_0172 +
           21329904-21331512,21331595-21331740,21332333-21332556,
           21333689-21334448
          Length = 912

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +1

Query: 364 GGKLXPPPREFPKKNXXFYTPPAPP 438
           GG   PPP + P  +    TPPAPP
Sbjct: 325 GGASPPPPADIPSTSRGEVTPPAPP 349


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 20/54 (37%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
 Frame = -1

Query: 836  PPPPXFXXGGGXVFXFXXXPXXGGXGXXPPPPXG--XPPPXXXXKKKXXGGXPP 681
            PPPP    GG         P  G  G  PPPP G    PP         GG PP
Sbjct: 1123 PPPPIGGLGGHQAPPAPPLP-EGIGGVPPPPPVGGLGGPPAPPPPAGFRGGTPP 1175


>09_04_0011 +
           13703564-13703766,13704685-13705526,13705628-13705704,
           13706294-13706339,13706479-13706722,13710078-13710150,
           13711119-13711235
          Length = 533

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
 Frame = +1

Query: 724 GGGXPXGGGGXXPXPPXXGFXKXKK--TXPPPXXKXGGGG 837
           GGG   GGGG  P     G     +    PPP    GGGG
Sbjct: 84  GGGVVVGGGGGDPWRRLDGSTASTELSLSPPPAQAAGGGG 123


>05_01_0141 - 937428-937717,938483-938705
          Length = 170

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 13/32 (40%), Positives = 14/32 (43%)
 Frame = +1

Query: 742 GGGGXXPXPPXXGFXKXKKTXPPPXXKXGGGG 837
           GGG   P PP  G+     T  PP    G GG
Sbjct: 25  GGGHGYPYPPQQGYYPPPPTAYPPPPPAGYGG 56


>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 3/54 (5%)
 Frame = +1

Query: 685 GXPPXFFFXXXXXGGGX---PXGGGGXXPXPPXXGFXKXKKTXPPPXXKXGGGG 837
           G PP         GGG    P GGGG  P     G        PP     GGGG
Sbjct: 89  GLPPGGGGAPGPLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGG 142


>02_04_0563 -
           23895573-23895614,23896330-23896390,23896901-23897025,
           23897217-23897302,23898052-23898167,23898274-23898336,
           23898451-23898530,23898751-23898871,23899419-23899501,
           23900081-23900155,23900436-23900936
          Length = 450

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 14/37 (37%), Positives = 16/37 (43%)
 Frame = +1

Query: 724 GGGXPXGGGGXXPXPPXXGFXKXKKTXPPPXXKXGGG 834
           GGG   GGGG    P   G  +     P P  + GGG
Sbjct: 45  GGGGGGGGGGGGARPTRFGLARQSSLDPTP--REGGG 79


>02_01_0458 +
           3291563-3291733,3292082-3292769,3292847-3293363,
           3293438-3293637,3294137-3294372,3294469-3295302
          Length = 881

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = -1

Query: 752 PPPPXGXPPPXXXXKKKXXGGXPPK 678
           PPPP   PPP    KK      PPK
Sbjct: 367 PPPPPRPPPPPPPIKKGAPPPAPPK 391


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,608,586
Number of Sequences: 37544
Number of extensions: 411877
Number of successful extensions: 1605
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1487
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3573221976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)