Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_FL5_F10
(886 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 51 1e-08
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 49 5e-08
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 48 1e-07
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 48 1e-07
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 47 2e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 45 8e-07
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 45 8e-07
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 45 8e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 45 1e-06
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 44 1e-06
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 44 1e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 43 4e-06
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 41 1e-05
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 39 7e-05
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 39 7e-05
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 36 4e-04
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 35 0.001
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 34 0.002
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 33 0.005
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 33 0.005
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 31 0.011
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 31 0.014
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 31 0.014
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 31 0.014
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 29 0.043
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 25 0.70
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 24 1.6
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 51.2 bits (117), Expect = 1e-08
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Frame = +2
Query: 326 ERLWRPDVVLLNAAATTAGDYALRAR----VSNXGSVSWIKRLDIXTPISMQLDNWPNDM 493
+++W+PD+VL N A G+Y +R + + G V W+ + ++ + +P D
Sbjct: 106 DKVWKPDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQ 162
Query: 494 QTCTFKFGSRMHNSDEMDFVI--DKRIYSM---FESGXWDV 601
QTC KFGS N D++ + +K + ++SG WD+
Sbjct: 163 QTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDI 203
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 49.2 bits (112), Expect = 5e-08
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Frame = +2
Query: 317 VSSERLWRPDVVLLNAAATT---AGDYALRARVSNXGSVSWIKRLDIXTPISMQLDNWPN 487
V S+ +W PD+ + N+ T G V + GSVS + + + +WP
Sbjct: 119 VKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPY 178
Query: 488 DMQTCTFKFGSRMHNSDEMDFVIDKRIYSM 577
D C FGS +H+ +E++ +DK+ + M
Sbjct: 179 DTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 48.0 bits (109), Expect = 1e-07
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +2
Query: 317 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNXGSVSWIKRLDIXTPISMQLDNWPNDM 493
V S+ +WRPD+VL N A A +A + + G V W + + ++ +P D
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDE 164
Query: 494 QTCTFKFGSRMHNSDEMD 547
QTC KFGS ++ ++D
Sbjct: 165 QTCVLKFGSWTYDGFKVD 182
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 48.0 bits (109), Expect = 1e-07
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +2
Query: 317 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNXGSVSWIKRLDIXTPISMQLDNWPNDM 493
V S+ +WRPD+VL N A A +A ++ G V W + + ++ +P D
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDE 160
Query: 494 QTCTFKFGSRMHNSDEMD 547
QTC KFGS ++ ++D
Sbjct: 161 QTCVMKFGSWTYDGFQVD 178
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 48.0 bits (109), Expect = 1e-07
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Frame = +2
Query: 317 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNXGSVSWIKRLDIXTPISMQLDNWPNDM 493
+ RLW+PDV++ N+A G Y V N G+ ++ + + + +P D
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 494 QTCTFKFGSRMHNSDEMDFVIDKR----IYSMFESGXWDVTG 607
Q C KFGS ++ ++D + I S +G WD+ G
Sbjct: 160 QRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNGEWDLLG 201
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 47.2 bits (107), Expect = 2e-07
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Frame = +2
Query: 299 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNXGSVSWIKRLDIXTPISM 466
G V SE +W PD+VL N A G+Y + +A + G VSW + +
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPPAIYKSSCEI 160
Query: 467 QLDNWPNDMQTCTFKFGSRMHNSDEMD 547
++ +P D Q+C KFGS +N ++D
Sbjct: 161 NVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 45.2 bits (102), Expect = 8e-07
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Frame = +2
Query: 317 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNXGSVSWIKRLDIXTPISMQLDNWPNDM 493
++ +LW+PD+++ N+A G Y V++ GS ++ + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDD 122
Query: 494 QTCTFKFGSRMHNSDEMDFVIDKR----IYSMFESGXWDVTG 607
Q C KFGS ++ +++D V+ + +G W + G
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVLSSETGGDLSDFITNGEWYLIG 164
Score = 23.4 bits (48), Expect = 2.8
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +1
Query: 247 LQMXWIDKRLSWNAGAXG 300
L++ W+D L WN G
Sbjct: 39 LKLEWVDYNLQWNESEYG 56
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 45.2 bits (102), Expect = 8e-07
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Frame = +2
Query: 317 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNXGSVSWIKRLDIXTPISMQLDNWP 484
V S+ +WRPD+VL N A G+Y + +A V G V W + S+ ++ +P
Sbjct: 105 VPSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFP 161
Query: 485 NDMQTCTFKFGSRMHNSDEMD 547
D+QTC K GS ++ ++D
Sbjct: 162 YDVQTCVLKLGSWTYDGFKVD 182
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 45.2 bits (102), Expect = 8e-07
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +2
Query: 299 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL-RARVSNXGSVSWIKRLDIXTPISMQLD 475
G + V SE +W PD+VL N A G + +A + G V W + + +
Sbjct: 91 GVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVR 150
Query: 476 NWPNDMQTCTFKFGSRMHNSDEMD 547
+P D QTC KFGS ++ ++D
Sbjct: 151 YFPFDQQTCFMKFGSWTYDGIQID 174
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 44.8 bits (101), Expect = 1e-06
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Frame = +2
Query: 317 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNXGSVSWIKRLDIXTPISMQLDNWPNDM 493
++ +LW+PD+++ N+A G Y V++ GS ++ + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDD 122
Query: 494 QTCTFKFGSRMHNSDEMDFVIDKR----IYSMFESGXWDVTG 607
Q C KFGS ++ +++D V+ + +G W + G
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVLSSETGGDLSDFITNGEWYLIG 164
Score = 23.4 bits (48), Expect = 2.8
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +1
Query: 247 LQMXWIDKRLSWNAGAXG 300
L++ W+D L WN G
Sbjct: 39 LKLEWVDYNLQWNESEYG 56
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 44.4 bits (100), Expect = 1e-06
Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Frame = +2
Query: 317 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNXGSVSWIKRLDIXTPISMQLDNWPNDM 493
++ +LW+PD+++ N+A G Y V++ GS ++ + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 494 QTCTFKFGSRMHNSDEMDFVIDKR----IYSMFESGXWDVTG 607
Q C KFGS ++ +++D V+ + +G W + G
Sbjct: 191 QHCDMKFGSWTYDGNQVDLVLSSETGGDLSDFITNGEWYLIG 232
Score = 23.4 bits (48), Expect = 2.8
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +1
Query: 247 LQMXWIDKRLSWNAGAXG 300
L++ W+D L WN G
Sbjct: 107 LKLEWVDYNLQWNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 44.4 bits (100), Expect = 1e-06
Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Frame = +2
Query: 317 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNXGSVSWIKRLDIXTPISMQLDNWPNDM 493
++ +LW+PD+++ N+A G Y V++ GS ++ + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 494 QTCTFKFGSRMHNSDEMDFVIDKR----IYSMFESGXWDVTG 607
Q C KFGS ++ +++D V+ + +G W + G
Sbjct: 191 QHCDMKFGSWTYDGNQVDLVLSSETGGDLSDFITNGEWYLIG 232
Score = 23.4 bits (48), Expect = 2.8
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +1
Query: 247 LQMXWIDKRLSWNAGAXG 300
L++ W+D L WN G
Sbjct: 107 LKLEWVDYNLQWNESEYG 124
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Frame = +2
Query: 317 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNXGSVSWIKRLDIXTPISMQLDNWPNDM 493
++ +LW+PD+++ N+A G Y V++ GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 494 QTCTFKFGSRMHNSDEMDFVIDKR----IYSMFESGXWDVTG 607
Q C KFGS ++ +++D V+ + +G W + G
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVLSSETGGDLSDFITNGEWYLIG 164
Score = 23.4 bits (48), Expect = 2.8
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +1
Query: 247 LQMXWIDKRLSWNAGAXG 300
L++ W+D L WN G
Sbjct: 39 LKLEWVDYNLQWNESEYG 56
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Frame = +2
Query: 317 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNXGSVSWIKRLDIXTPISMQLDNWPNDM 493
++ +LW+PD+++ N+A G Y V++ GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 494 QTCTFKFGSRMHNSDEMDFVIDKR----IYSMFESGXWDVTG 607
Q C KFGS ++ +++D V+ + +G W + G
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVLSSETGGDLSDFITNGEWYLIG 164
Score = 23.4 bits (48), Expect = 2.8
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +1
Query: 247 LQMXWIDKRLSWNAGAXG 300
L++ W+D L WN G
Sbjct: 39 LKLEWVDYNLQWNESEYG 56
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 43.6 bits (98), Expect = 2e-06
Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Frame = +2
Query: 317 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNXGSVSWIKRLDIXTPISMQLDNWPNDM 493
++ +LW+PD+++ N+A G Y V++ GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDD 122
Query: 494 QTCTFKFGSRMHNSDEMDFVIDKR----IYSMFESGXWDVTG 607
Q C KFGS ++ +++D V+ + +G W + G
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVLSSETGGDLSDFITNGEWYLIG 164
Score = 23.4 bits (48), Expect = 2.8
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +1
Query: 247 LQMXWIDKRLSWNAGAXG 300
L++ W+D L WN G
Sbjct: 39 LKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 43.6 bits (98), Expect = 2e-06
Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Frame = +2
Query: 317 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNXGSVSWIKRLDIXTPISMQLDNWPNDM 493
++ +LW+PD+++ N+A G Y V++ GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDD 122
Query: 494 QTCTFKFGSRMHNSDEMDFVIDKR----IYSMFESGXWDVTG 607
Q C KFGS ++ +++D V+ + +G W + G
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVLSSETGGDLSDFITNGEWYLIG 164
Score = 23.4 bits (48), Expect = 2.8
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +1
Query: 247 LQMXWIDKRLSWNAGAXG 300
L++ W+D L WN G
Sbjct: 39 LKLEWVDYNLQWNESEYG 56
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 42.7 bits (96), Expect = 4e-06
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Frame = +2
Query: 299 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNXGSVSWIKRLDIXTPISM 466
G T V SE +W PD+VL N A G+Y + +A + + G V W + +
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEI 147
Query: 467 QLDNWPNDMQTCTFKFGSRMHNSDEMD 547
++ +P D QTC KFGS ++ +D
Sbjct: 148 DVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 41.1 bits (92), Expect = 1e-05
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +2
Query: 326 ERLWRPDVVLLNAAATTAGDYALR---ARVSNXGSVSWIKRLDIXTPISMQLDNWPNDMQ 496
ER+WRPD N + + R+S G + + RL I M+L N+P D Q
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQ 174
Query: 497 TCTFKFGS 520
+C GS
Sbjct: 175 SCPLILGS 182
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 38.7 bits (86), Expect = 7e-05
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = +2
Query: 329 RLWRPDVVLLNAAAT---TAGDYALRARVSNXGSVSWIKRLDIXTPISMQLDNWPNDMQT 499
R+W+PD N + T R+ G V + RL I M L+N+P D Q
Sbjct: 84 RIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQR 143
Query: 500 CTFKFGS 520
C +FGS
Sbjct: 144 CPLQFGS 150
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 38.7 bits (86), Expect = 7e-05
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +2
Query: 317 VSSERLWRPDVVLLNAAATTAGDYALRARV--SNXGSVSWIKRLDIXTPISMQLDNWPND 490
V R+WRPD +L N A + V S+ G V W+ + + ++ +P D
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFD 141
Query: 491 MQTCTFKFGSRMHNSDEMD 547
Q C K+ S ++ +++
Sbjct: 142 EQRCVLKWASWTYDGYQLE 160
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 36.3 bits (80), Expect = 4e-04
Identities = 16/77 (20%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +2
Query: 332 LWRPDVVLLNAAATTAGDYALRAR---VSNXGSVSWIKRLDIXTPISMQLDNWPNDMQTC 502
+WRPD NA T + ++ + + ++ ++ +L + +M+ +++P+D Q C
Sbjct: 87 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQIC 146
Query: 503 TFKFGSRMHNSDEMDFV 553
+ S H + ++ F+
Sbjct: 147 SMMIESLSHTTQDLVFI 163
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 34.7 bits (76), Expect = 0.001
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +2
Query: 326 ERLWRPDVVLLNAAATTAGDYALRAR---VSNXGSVSWIKRLDIXTPISMQLDNWPNDMQ 496
+ +WRPD NA + T + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 497 TCTFKFGSRMHNSDEMDFVID 559
C + S H +DEM F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 34.3 bits (75), Expect = 0.002
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Frame = +2
Query: 323 SERLWRPDVVLLNAAATTAGDYALR---ARVSNXGSVSWIKRLDIXTPISMQLDNWPNDM 493
+E++W PD N + D R R+S GSV++ R M L +P D
Sbjct: 113 AEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDS 172
Query: 494 QTCTFKFGS 520
Q CT + S
Sbjct: 173 QNCTVEIES 181
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 32.7 bits (71), Expect = 0.005
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +2
Query: 314 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNXGSVSWIKRLDIXTPISMQLDNWP 484
L + R+W PD+ N + + R+ GSV + R+ + M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 485 NDMQTCTFKFGSRMHNSDEMDFV 553
D Q C+ + S +D++ F+
Sbjct: 169 LDRQVCSLRMASYGWTTDDLVFL 191
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 32.7 bits (71), Expect = 0.005
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +2
Query: 314 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNXGSVSWIKRLDIXTPISMQLDNWP 484
L + R+W PD+ N + + R+ GSV + R+ + M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 485 NDMQTCTFKFGSRMHNSDEMDFV 553
D Q C+ + S +D++ F+
Sbjct: 169 LDRQVCSLRMASYGWTTDDLVFL 191
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 31.5 bits (68), Expect = 0.011
Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 9/136 (6%)
Frame = +2
Query: 299 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNXGSVSWIKRLDIX 451
G T V SE +W PD +N ATT+ ++ R+ + GS++ RL I
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 452 TPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDKRIYSMFESGXWDVTGSVHCGCRA 631
M L +P D Q C + S + ++ + + + S+ S ++ G R
Sbjct: 136 ASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNAGLQSVGISNEVELPQFRVLGHRQ 195
Query: 632 RXRGX*TSRGXCSRMS 679
R S G SR++
Sbjct: 196 RHSTIHLSTGNYSRLA 211
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 31.1 bits (67), Expect = 0.014
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 9/83 (10%)
Frame = +2
Query: 299 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNXGSVSWIKRLDIX 451
G T V SE +W PD +N ATT+ ++ R+ + GS++ RL I
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 452 TPISMQLDNWPNDMQTCTFKFGS 520
M L +P D Q C + S
Sbjct: 136 ASCPMNLQYFPMDRQLCHIEIES 158
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 31.1 bits (67), Expect = 0.014
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +2
Query: 317 VSSERLWRPDVVLLNAAATTAGDY---ALRARVSNXGSVSWIKRLDIXTPISMQLDN--W 481
V S +W PD+V+ ++ + D ++ V N G++ + TP+ + D+ W
Sbjct: 110 VKSYEIWVPDIVM-HSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPVC-EYDHTWW 166
Query: 482 PNDMQTCTFKFGSRMHNSDEM 544
P D+ CT S H S+E+
Sbjct: 167 PYDILNCTIHIASWSHGSNEI 187
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 31.1 bits (67), Expect = 0.014
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 9/83 (10%)
Frame = +2
Query: 299 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNXGSVSWIKRLDIX 451
G T V SE +W PD +N ATT+ ++ R+ + GS++ RL I
Sbjct: 18 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 74
Query: 452 TPISMQLDNWPNDMQTCTFKFGS 520
M L +P D Q C + S
Sbjct: 75 ASCPMNLQYFPMDRQLCHIEIES 97
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 29.5 bits (63), Expect = 0.043
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = +2
Query: 332 LWRPDVVLLN--AAATTAGDYA-LRARVSNXGSVSWIKRLDIXTPISMQLDNWPNDMQTC 502
+W P V + N ++A T + + + G V RL ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 503 TFKFGSRMHNSDEM 544
F S HN +M
Sbjct: 157 PLIFESWTHNVLDM 170
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 25.4 bits (53), Expect = 0.70
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Frame = +2
Query: 326 ERLWRPDVVLLNAAATTAGDYALRARVSN-----XGSVSWIKRLDIXTPISMQLDNWPND 490
+ LW+PD LNA + AL + S+ +V + R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 491 MQTCTFKFGSRMHNSDEM 544
+Q C S ++ ++
Sbjct: 127 IQICPIYIESFSYHKQKL 144
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 24.2 bits (50), Expect = 1.6
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -1
Query: 325 RGHQPSAAAPXPLRSNSVVCRSXSFEDLPVFARWTSDSRMLACXKCRVRXTTI 167
RG+QPS + RS V R+ S + + R ++DS + R R T +
Sbjct: 347 RGNQPSTSECGEFRSVVVQKRNGSMIECNISPRSSADSCQVGIMAQRHRDTIV 399
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,292
Number of Sequences: 438
Number of extensions: 3941
Number of successful extensions: 63
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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