Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_FL5_F07
(845 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 36 0.036
Z81082-3|CAB03095.2| 603|Caenorhabditis elegans Hypothetical pr... 31 1.4
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 30 1.8
U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical pr... 30 2.4
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 30 2.4
Z74038-2|CAE48502.1| 611|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z74038-1|CAA98497.2| 578|Caenorhabditis elegans Hypothetical pr... 29 3.1
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 3.1
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 29 3.1
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 29 3.1
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 29 4.2
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 29 4.2
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 29 4.2
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 29 4.2
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 29 4.2
Z66519-10|CAD59139.1| 446|Caenorhabditis elegans Hypothetical p... 29 5.5
Z66519-9|CAA91380.1| 448|Caenorhabditis elegans Hypothetical pr... 29 5.5
AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical... 29 5.5
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 28 9.6
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 9.6
U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical pr... 28 9.6
AL132876-21|CAD21671.1| 418|Caenorhabditis elegans Hypothetical... 28 9.6
AF099913-15|AAC68744.1| 284|Caenorhabditis elegans Hypothetical... 28 9.6
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 35.9 bits (79), Expect = 0.036
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 55 AMALSLDVRNAFNTLPWSVIAGAL-EYHGVPAYLRRLIGSYLEGRSIQCIGHGGAMYRFP 231
A+ LD+R AF+ +P + L E G+ ++ +G+YL R I+
Sbjct: 469 AIMACLDLRAAFDKVPTKKLCNDLMEAQGIEPKIKLWLGNYLHKRLIRTSHDNHWSKWHT 528
Query: 232 VERGVPQGSVLGP 270
+ GVPQGSV+ P
Sbjct: 529 LLGGVPQGSVISP 541
>Z81082-3|CAB03095.2| 603|Caenorhabditis elegans Hypothetical
protein F42G4.3a protein.
Length = 603
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = +3
Query: 141 PRIPPPTDRLLPRGQVDPVHRTRWGDVPLPRRARCSAGVRPGPPXCGTSA 290
P PPP LLP G++ P + + D P A +P P SA
Sbjct: 3 PPPPPPPPPLLPSGEILPSRKWKTEDAPRRNNHPAPAPPKPSRPTVDASA 52
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 30.3 bits (65), Expect = 1.8
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +1
Query: 31 EAVSRGGVAMALSLDVRNAFNTLPWSVIAGALEYHGVPAYLRRLIGSYLEGRSIQC-IGH 207
+++ G + LD AF+ LP ++ L L + +L RS + IG
Sbjct: 6 KSIDHGEQIDIIYLDFSKAFDRLPHDLLLDKLVSLRKNKNLLIWVNEFLSNRSFRVRIGQ 65
Query: 208 GGAMYRFPVERGVPQGSVLGPL 273
+ +F GVPQG+VL PL
Sbjct: 66 TLSSRKFAT-CGVPQGAVLSPL 86
>U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical protein
F13B9.1c protein.
Length = 1609
Score = 30.3 bits (65), Expect = 1.8
Identities = 26/76 (34%), Positives = 32/76 (42%)
Frame = +3
Query: 120 GAGVSRRPRIPPPTDRLLPRGQVDPVHRTRWGDVPLPRRARCSAGVRPGPPXCGTSATTG 299
GAGV + P PPP P Q P G + R AR S R G GTS++
Sbjct: 1511 GAGVEQEPVAPPP-----PMAQAGPAPPVGGGGL---RAARASRYARVG----GTSSSAS 1558
Query: 300 SCGASFGDPSPGSA*F 347
A P+P +A F
Sbjct: 1559 QAPAGMMAPAPPTANF 1574
>Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical
protein F52B5.3 protein.
Length = 1425
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -1
Query: 293 RSRCSTXRGPRTDPCGTPRSTGKRYIAPPCPMHWIDLPS 177
R RC RGP T C P ST K +PP P + + S
Sbjct: 517 RERCLMPRGPLTFTCENPASTTK---SPPSPTPTLGISS 552
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 118 GALEYHGVPAYLRRLIGSYLEGRSIQC-IGHGGAMYRFPVERGVPQGSVLGPL 273
G L G+ + +LE R+ I + +P+ GVPQGSV GPL
Sbjct: 838 GKLAKFGLDSLTCSWYKEFLENRTFSVKINKFVSKNSYPISSGVPQGSVSGPL 890
>Z74038-2|CAE48502.1| 611|Caenorhabditis elegans Hypothetical
protein F58B4.1b protein.
Length = 611
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/65 (30%), Positives = 21/65 (32%), Gaps = 1/65 (1%)
Frame = +3
Query: 222 PLPRRARCSAGVRPGPPXCGTSATTGSCGASFGDPSP-GSA*FVTLTTRWS*LRGGTTGS 398
P A+C G P P C G D P G VT TT W L
Sbjct: 358 PAASSAQCKNGGFPSPRNCAICICPSGYGGILCDQRPPGCGDSVTATTTWQTLTNTIGDG 417
Query: 399 LPVWR 413
LP R
Sbjct: 418 LPTLR 422
>Z74038-1|CAA98497.2| 578|Caenorhabditis elegans Hypothetical
protein F58B4.1a protein.
Length = 578
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/65 (30%), Positives = 21/65 (32%), Gaps = 1/65 (1%)
Frame = +3
Query: 222 PLPRRARCSAGVRPGPPXCGTSATTGSCGASFGDPSP-GSA*FVTLTTRWS*LRGGTTGS 398
P A+C G P P C G D P G VT TT W L
Sbjct: 358 PAASSAQCKNGGFPSPRNCAICICPSGYGGILCDQRPPGCGDSVTATTTWQTLTNTIGDG 417
Query: 399 LPVWR 413
LP R
Sbjct: 418 LPTLR 422
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/67 (29%), Positives = 23/67 (34%), Gaps = 1/67 (1%)
Frame = -1
Query: 791 FXXQGXAPYGSPV*XFXPHHPPIRGGAPPDRTPRRLEAAGSKSRP-SPSVEGPTSQSERG 615
F G P G P F P P GG P P +G P PS P+
Sbjct: 470 FNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGMPPVP 529
Query: 614 SSTDHPV 594
TD P+
Sbjct: 530 LPTDLPI 536
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = -1
Query: 791 FXXQGXAPYGSPV*XFXPHHPPIRGGAPPDRTPRRLEAAGSKSRPSPSVEGPTSQSERG 615
F G P G P F P P GG P P +G P E P S G
Sbjct: 155 FDPSGAPPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTG 213
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/59 (28%), Positives = 19/59 (32%)
Frame = -1
Query: 791 FXXQGXAPYGSPV*XFXPHHPPIRGGAPPDRTPRRLEAAGSKSRPSPSVEGPTSQSERG 615
F G P G P F P P GG P P +G + P P S G
Sbjct: 170 FDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPG 228
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +1
Query: 193 QCIGHGGAMYRFPVERGVPQGSV 261
QC+ HGGA++ F V++G QG+V
Sbjct: 306 QCLAHGGALHVF-VDKGSEQGNV 327
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +1
Query: 193 QCIGHGGAMYRFPVERGVPQGSV 261
QC+ HGGA++ F V++G QG+V
Sbjct: 451 QCLAHGGALHVF-VDKGSEQGNV 472
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +3
Query: 39 IPGRGGDGVILRCKERLQHPALVGDRGGAGVSRRPRIPPP 158
+PG GD + HP + GD+G GV P IP P
Sbjct: 760 LPGMKGDSGLPGPPGLPGHPGVPGDKGFGGVPGLPGIPGP 799
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +3
Query: 39 IPGRGGDGVILRCKERLQHPALVGDRGGAGVSRRPRIPPP 158
+PG GD + HP + GD+G GV P IP P
Sbjct: 759 LPGMKGDSGLPGPPGLPGHPGVPGDKGFGGVPGLPGIPGP 798
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +3
Query: 39 IPGRGGDGVILRCKERLQHPALVGDRGGAGVSRRPRIPPP 158
+PG GD + HP + GD+G GV P IP P
Sbjct: 759 LPGMKGDSGLPGPPGLPGHPGVPGDKGFGGVPGLPGIPGP 798
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +3
Query: 39 IPGRGGDGVILRCKERLQHPALVGDRGGAGVSRRPRIPPP 158
+PG GD + HP + GD+G GV P IP P
Sbjct: 760 LPGMKGDSGLPGPPGLPGHPGVPGDKGFGGVPGLPGIPGP 799
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +3
Query: 39 IPGRGGDGVILRCKERLQHPALVGDRGGAGVSRRPRIPPP 158
+PG GD + HP + GD+G GV P IP P
Sbjct: 796 LPGMKGDSGLPGPPGLPGHPGVPGDKGFGGVPGLPGIPGP 835
>Z66519-10|CAD59139.1| 446|Caenorhabditis elegans Hypothetical
protein B0334.11b protein.
Length = 446
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 407 DGQTPGSPSPELRPTCRQCNKLR*ARGGVPE 315
DG+ P P+P+L T ++ +L AR PE
Sbjct: 335 DGEPPQQPAPQLLITAKEMKRLEQARNKKPE 365
>Z66519-9|CAA91380.1| 448|Caenorhabditis elegans Hypothetical
protein B0334.11a protein.
Length = 448
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 407 DGQTPGSPSPELRPTCRQCNKLR*ARGGVPE 315
DG+ P P+P+L T ++ +L AR PE
Sbjct: 337 DGEPPQQPAPQLLITAKEMKRLEQARNKKPE 367
>AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical
protein Y57A10A.19 protein.
Length = 425
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -1
Query: 740 PHHPPIRGGAPPDRTPRRLEAAGSKSRPSPSVEGPTSQSER 618
P P R +P DRT RR + + SPSVE S R
Sbjct: 291 PEDPRERRRSPEDRTVRRRSPERRRQQRSPSVERRKSPQRR 331
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 27.9 bits (59), Expect = 9.6
Identities = 41/173 (23%), Positives = 56/173 (32%), Gaps = 5/173 (2%)
Frame = -1
Query: 740 PHHPPIRGGAPPDRTPRRLEAAGSKSRPSPSVEGPTSQSERGSSTDHPVQGRGTEDXXXX 561
P R +PP RR + SKS P P+ + S+S+ +
Sbjct: 331 PKRAKSRSKSPPAPARRRRSPSASKS-PPPAPKRAKSRSKSPPARRRRSPSASKSPPAPR 389
Query: 560 XXXXXXXXXXGHPEAALVPARETTGPGFCRAPPRVPAV*SL*RCVPRLRTPDGQTPGSPS 381
P+ + PAR P ++PP P R R ++P P+
Sbjct: 390 RRRSPSKSRSPAPKREIPPARRRRSPSASKSPP-APK-----RAKSRSKSP-------PA 436
Query: 380 PELRPTCRQCNKLR*ARGGVPE*RPAGPSRSRC---STXRGP--RTDPCGTPR 237
P R + Q R P P P R R S R P R P PR
Sbjct: 437 PRRRRSPSQSKSPAPRRRRSPSKSPQAPRRRRSPSGSKSRSPRRRRSPAAAPR 489
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/48 (29%), Positives = 16/48 (33%)
Frame = -1
Query: 740 PHHPPIRGGAPPDRTPRRLEAAGSKSRPSPSVEGPTSQSERGSSTDHP 597
P H PP PR+ A GS P P P + R P
Sbjct: 113 PQHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRP 160
>U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical protein
F13B9.1b protein.
Length = 1614
Score = 27.9 bits (59), Expect = 9.6
Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
Frame = +3
Query: 120 GAGVSRRPRIPPPTDRLLPRGQVDPVHRTRWGDVPLPRRARCSAG--VRPGPPXCGTSAT 293
GAGV + P PPP P Q P G + R SA R G GTS++
Sbjct: 1511 GAGVEQEPVAPPP-----PMAQAGPAPPVGGGGLRAARGVMISASRYARVG----GTSSS 1561
Query: 294 TGSCGASFGDPSPGSA*F 347
A P+P +A F
Sbjct: 1562 ASQAPAGMMAPAPPTANF 1579
>AL132876-21|CAD21671.1| 418|Caenorhabditis elegans Hypothetical
protein Y105E8A.25 protein.
Length = 418
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -1
Query: 710 PPDRTPRRLEAAGSKSRPSP 651
PP R PRR+ A S SR SP
Sbjct: 370 PPVRLPRRVSAVSSTSRSSP 389
>AF099913-15|AAC68744.1| 284|Caenorhabditis elegans Hypothetical
protein C29F9.1 protein.
Length = 284
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -2
Query: 127 PAPPRSPTRAGC*RRSLHLRITPSPPRPGIRLHR 26
P PP +AGC R + I P IRLHR
Sbjct: 37 PYPPGIHAQAGCATRPISAHIVPQALIEPIRLHR 70
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,319,028
Number of Sequences: 27780
Number of extensions: 575487
Number of successful extensions: 1891
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1867
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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