Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_FL5_F03
(803 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 80 2e-15
Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical pr... 33 0.24
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 33 0.32
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.32
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.32
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.32
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 31 0.73
X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein. 31 0.97
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 31 0.97
U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter... 31 0.97
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 0.97
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 31 0.97
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 31 1.3
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 30 1.7
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 30 1.7
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 30 1.7
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 30 1.7
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 30 1.7
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 30 2.2
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 30 2.2
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 30 2.2
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 29 2.9
U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protei... 29 2.9
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 29 2.9
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 29 2.9
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 29 2.9
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 29 2.9
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 2.9
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 2.9
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 2.9
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 3.9
U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like pr... 29 3.9
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 3.9
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 3.9
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 3.9
AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen prot... 29 3.9
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 29 3.9
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 29 5.1
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 29 5.1
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 29 5.1
U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protei... 29 5.1
U21308-11|AAB93312.3| 265|Caenorhabditis elegans Roller: helica... 29 5.1
U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helica... 29 5.1
M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein. 29 5.1
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 29 5.1
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 29 5.1
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 5.1
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 5.1
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 5.1
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical p... 28 9.0
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 28 9.0
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 28 9.0
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 28 9.0
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 28 9.0
AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen pro... 28 9.0
AC024838-8|AAF60822.1| 234|Caenorhabditis elegans Thaumatin fam... 28 9.0
>Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical
protein B0393.1 protein.
Length = 276
Score = 79.8 bits (188), Expect = 2e-15
Identities = 49/120 (40%), Positives = 67/120 (55%), Gaps = 1/120 (0%)
Frame = +2
Query: 77 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWGK-TC 253
MSGG AL EEDV K+LA HLG+ N+NFQM+ YVYKRR DG ++IN+++TW K
Sbjct: 1 MSGGAAHSALTEEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLL 60
Query: 254 SGXSCCRNHRKTPLMCSSSHHGPFGQRAVLEXWXAXPVLXPIXGTFYXPVXLINPIPAGF 433
+ + ++ S+ P+ QRA+L+ + A I G F P L N I F
Sbjct: 61 AARAIAAVENPADVVVVSAR--PYAQRALLK-FAAHTGATAIFGRF-SPGCLTNQIQKTF 116
>Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical
protein ZC373.7 protein.
Length = 297
Score = 33.1 bits (72), Expect = 0.24
Identities = 22/81 (27%), Positives = 23/81 (28%)
Frame = +2
Query: 530 GTKNXPQKIGGXGFPXXPXFPPXXGXXGGGXPXKXPXXFGXFSPXXPPGGLXGXXXXXPG 709
G P GG G P P G G P P G P PG P
Sbjct: 191 GNNGAPGAAGGPGQPGRPGKDGQRGKGSAGAPGA-PGKAGPAGPAGGPGNNGSAGTPGPA 249
Query: 710 PPXXXXGXXXPRXRXGXPXTP 772
P G + G P TP
Sbjct: 250 GPAGNPGTPGNKGSDGHPGTP 270
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 32.7 bits (71), Expect = 0.32
Identities = 25/94 (26%), Positives = 28/94 (29%), Gaps = 3/94 (3%)
Frame = +2
Query: 530 GTKNXPQKIGGXGFPXXPXFPPXXGXXGGGXPXKXPXXFGXFSPXXPPGGL-XGXXXXXP 706
G P K G G P P PP P P G P PPG P
Sbjct: 117 GNPGRPGKPGAPGLPGNPGKPPVQPCEPITPPPCKPCPDGPAGPPGPPGAPGDAGTNGAP 176
Query: 707 GPP--XXXXGXXXPRXRXGXPXTPXXXSPSXKKG 802
G P G P+ G P +P + G
Sbjct: 177 GAPGGDAPPGEAGPKGPPGPPGSPGAPGEPGRPG 210
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.32
Identities = 23/72 (31%), Positives = 24/72 (33%), Gaps = 1/72 (1%)
Frame = +2
Query: 530 GTKNXPQKIGGXGFPXXPXFPPXXGXXGGGXPXKX-PXXFGXFSPXXPPGGLXGXXXXXP 706
G+ P GG P P PP G P P G P PPGGL P
Sbjct: 702 GSSALPPITGGP--PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 759
Query: 707 GPPXXXXGXXXP 742
PP G P
Sbjct: 760 PPPPPPGGCPPP 771
Score = 31.5 bits (68), Expect = 0.73
Identities = 22/73 (30%), Positives = 23/73 (31%), Gaps = 4/73 (5%)
Frame = -3
Query: 762 GXPXLXRGXXXPXXFXGGPGXXXXXPXXPPGGXX----GENXPKXXGXXXGXPPPXXPXX 595
G P + G P G P P PP G G P PPP P
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Query: 594 GGKXGXXGXPXPP 556
GG G P PP
Sbjct: 778 GGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.32
Identities = 23/72 (31%), Positives = 24/72 (33%), Gaps = 1/72 (1%)
Frame = +2
Query: 530 GTKNXPQKIGGXGFPXXPXFPPXXGXXGGGXPXKX-PXXFGXFSPXXPPGGLXGXXXXXP 706
G+ P GG P P PP G P P G P PPGGL P
Sbjct: 702 GSSALPPITGGP--PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 759
Query: 707 GPPXXXXGXXXP 742
PP G P
Sbjct: 760 PPPPPPGGCPPP 771
Score = 31.5 bits (68), Expect = 0.73
Identities = 22/73 (30%), Positives = 23/73 (31%), Gaps = 4/73 (5%)
Frame = -3
Query: 762 GXPXLXRGXXXPXXFXGGPGXXXXXPXXPPGGXX----GENXPKXXGXXXGXPPPXXPXX 595
G P + G P G P P PP G G P PPP P
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Query: 594 GGKXGXXGXPXPP 556
GG G P PP
Sbjct: 778 GGFKGGPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.32
Identities = 23/72 (31%), Positives = 24/72 (33%), Gaps = 1/72 (1%)
Frame = +2
Query: 530 GTKNXPQKIGGXGFPXXPXFPPXXGXXGGGXPXKX-PXXFGXFSPXXPPGGLXGXXXXXP 706
G+ P GG P P PP G P P G P PPGGL P
Sbjct: 285 GSSALPPITGGP--PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 342
Query: 707 GPPXXXXGXXXP 742
PP G P
Sbjct: 343 PPPPPPGGCPPP 354
Score = 31.5 bits (68), Expect = 0.73
Identities = 22/73 (30%), Positives = 23/73 (31%), Gaps = 4/73 (5%)
Frame = -3
Query: 762 GXPXLXRGXXXPXXFXGGPGXXXXXPXXPPGGXX----GENXPKXXGXXXGXPPPXXPXX 595
G P + G P G P P PP G G P PPP P
Sbjct: 301 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
Query: 594 GGKXGXXGXPXPP 556
GG G P PP
Sbjct: 361 GGFKGGPPPPPPP 373
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 31.5 bits (68), Expect = 0.73
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = -3
Query: 741 GXXXPXXFXGGPGXXXXXPXXPPGGXXGENXPKXXGXXXGXPPPXXPXXGGKXGXXGXPX 562
G P G PG P PPG + P G PP P GG G P
Sbjct: 265 GPIGPPGQPGAPGSSQPGPQGPPGDPGIDGAPGNPGSPGEPGPPGQPGAGG--GCDHCPP 322
Query: 561 P 559
P
Sbjct: 323 P 323
>X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein.
Length = 318
Score = 31.1 bits (67), Expect = 0.97
Identities = 22/80 (27%), Positives = 24/80 (30%), Gaps = 2/80 (2%)
Frame = +2
Query: 530 GTKNXPQKIGGXGFPXXPXFPPXXGXXGGGXPXKXPXXFGXFSPXXPPG--GLXGXXXXX 703
G P + G G P P P G G P P G PPG + G
Sbjct: 156 GEVGRPGQTGESGHPGLPGRPGKPGRVGDAGPQGEPGEQGEPGIKGPPGDDSIGGTGIKG 215
Query: 704 PGPPXXXXGXXXPRXRXGXP 763
P P G P G P
Sbjct: 216 PPGPPGPRGPKGPPGSNGLP 235
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 31.1 bits (67), Expect = 0.97
Identities = 19/71 (26%), Positives = 20/71 (28%)
Frame = -3
Query: 771 GVXGXPXLXRGXXXPXXFXGGPGXXXXXPXXPPGGXXGENXPKXXGXXXGXPPPXXPXXG 592
G G P P G P PPG P G PP P
Sbjct: 201 GAPGVPGEKGPTGEPGKVINGAPPGPPGPPGPPGPQGPPGPPGKDGQPGKAGPPGLPGDP 260
Query: 591 GKXGXXGXPXP 559
G+ G G P P
Sbjct: 261 GEKGSDGLPGP 271
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 3/47 (6%)
Frame = -3
Query: 687 PXXPPG--GXXGENXPKXX-GXXXGXPPPXXPXXGGKXGXXGXPXPP 556
P P G G GE P G PP P G G G P PP
Sbjct: 196 PSGPQGAPGVPGEKGPTGEPGKVINGAPPGPPGPPGPPGPQGPPGPP 242
Score = 27.9 bits (59), Expect = 9.0
Identities = 22/73 (30%), Positives = 22/73 (30%), Gaps = 1/73 (1%)
Frame = -3
Query: 771 GVXGXPXLXRGXXXPXXFXGGPGXXXXX-PXXPPGGXXGENXPKXXGXXXGXPPPXXPXX 595
G G P L G P G PG P PG P G P P
Sbjct: 183 GQDGVPGLP-GPPGPSGPQGAPGVPGEKGPTGEPGKVINGAPPGPPGPPGPPGPQGPPGP 241
Query: 594 GGKXGXXGXPXPP 556
GK G G PP
Sbjct: 242 PGKDGQPGKAGPP 254
>U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 7 protein.
Length = 318
Score = 31.1 bits (67), Expect = 0.97
Identities = 22/80 (27%), Positives = 24/80 (30%), Gaps = 2/80 (2%)
Frame = +2
Query: 530 GTKNXPQKIGGXGFPXXPXFPPXXGXXGGGXPXKXPXXFGXFSPXXPPG--GLXGXXXXX 703
G P + G G P P P G G P P G PPG + G
Sbjct: 156 GEVGRPGQTGESGHPGLPGRPGKPGRVGDAGPQGEPGEQGEPGIKGPPGDDSIGGTGIKG 215
Query: 704 PGPPXXXXGXXXPRXRXGXP 763
P P G P G P
Sbjct: 216 PPGPPGPRGPKGPPGSNGLP 235
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.1 bits (67), Expect = 0.97
Identities = 17/54 (31%), Positives = 19/54 (35%)
Frame = -3
Query: 714 GGPGXXXXXPXXPPGGXXGENXPKXXGXXXGXPPPXXPXXGGKXGXXGXPXPPI 553
GGPG P PG P+ G PPP P G G PP+
Sbjct: 404 GGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGP---GAYGPPPTGFPPV 454
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 31.1 bits (67), Expect = 0.97
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = -3
Query: 741 GXXXPXXFXGGPGXXXXXPXXPPGGXXGENXPKXXGXXXGXPPPXXPXXGGKXGXXGXPX 562
G P G PG PGG G P G P P P G+ G G
Sbjct: 164 GPPGPEGPNGEPGNKGPAGPPGPGGKPGPAGPPGENGNNGEPQPGAPGEPGQPGQPGQRG 223
Query: 561 P 559
P
Sbjct: 224 P 224
Score = 29.5 bits (63), Expect = 2.9
Identities = 27/93 (29%), Positives = 28/93 (30%), Gaps = 2/93 (2%)
Frame = +2
Query: 530 GTKNXPQKIGGXGFPXXPXFPPXXGXXGGGXPXKXPXXFGXFSPXXPPG--GLXGXXXXX 703
G+ P K G G P PP P P G P PPG G G
Sbjct: 104 GSAGRPGKPGAPGLNGNPGRPPKEPCEPLTPPPCKPCPEGPPGPAGPPGPDGNKG-PLGP 162
Query: 704 PGPPXXXXGXXXPRXRXGXPXTPXXXSPSXKKG 802
PGPP G P G P K G
Sbjct: 163 PGPP----GPEGPNGEPGNKGPAGPPGPGGKPG 191
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/69 (30%), Positives = 22/69 (31%)
Frame = -3
Query: 762 GXPXLXRGXXXPXXFXGGPGXXXXXPXXPPGGXXGENXPKXXGXXXGXPPPXXPXXGGKX 583
G P + G P G PG PP G P G PPP P G
Sbjct: 141 GMPPMPSGMMPPR---GMPGAYPPPRGYPPAPAPGVYMPPP-GMPGAYPPPRMPIGHGPP 196
Query: 582 GXXGXPXPP 556
G P PP
Sbjct: 197 GGPPMPGPP 205
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/69 (30%), Positives = 22/69 (31%)
Frame = -3
Query: 762 GXPXLXRGXXXPXXFXGGPGXXXXXPXXPPGGXXGENXPKXXGXXXGXPPPXXPXXGGKX 583
G P + G P G PG PP G P G PPP P G
Sbjct: 141 GMPPMPSGMMPPR---GMPGAYPPPRGYPPAPAPGVYMPPP-GMPGAYPPPRMPIGHGPP 196
Query: 582 GXXGXPXPP 556
G P PP
Sbjct: 197 GGPPMPGPP 205
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 3/56 (5%)
Frame = -3
Query: 714 GGPGXXXXX-PXXPPG--GXXGENXPKXXGXXXGXPPPXXPXXGGKXGXXGXPXPP 556
G PG P PPG G G + P G P P P G G G P PP
Sbjct: 213 GAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPP--GADGQSGPPGPP 266
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/53 (30%), Positives = 18/53 (33%), Gaps = 1/53 (1%)
Frame = -3
Query: 714 GGPGXXXXX-PXXPPGGXXGENXPKXXGXXXGXPPPXXPXXGGKXGXXGXPXP 559
G PG P PPG + P G P P G+ G G P P
Sbjct: 216 GEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPPGP 268
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = -3
Query: 714 GGPGXXXXXPXXPPGGXX--GENXPKXXGXXXGXPPPXXP-XXGGKXGXXGXPXPP 556
GGPG P PPG GE P G G P P P G+ G G P P
Sbjct: 153 GGPG-----PKGPPGPPGGHGEPGPAGRGGPRGPPGPGGPQGEAGEDGGAGNPGTP 203
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 3/56 (5%)
Frame = -3
Query: 714 GGPGXXXXX-PXXPPG--GXXGENXPKXXGXXXGXPPPXXPXXGGKXGXXGXPXPP 556
G PG P PPG G G + P G P P P G G G P PP
Sbjct: 220 GAPGEAGDAGPAGPPGPPGAPGNDGPPGPPGPKGSPGPDGP--AGVDGQAGPPGPP 273
Score = 28.7 bits (61), Expect = 5.1
Identities = 25/94 (26%), Positives = 26/94 (27%), Gaps = 3/94 (3%)
Frame = +2
Query: 530 GTKNXPQKIGGXGFPXXPXFPPXXGXXGGGXPXKXPXXFGXFSPXXPPGGLXG-XXXXXP 706
G P + G G P P PP P P G P PPG P
Sbjct: 116 GKPGKPGRPGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTP 175
Query: 707 GPP--XXXXGXXXPRXRXGXPXTPXXXSPSXKKG 802
G P G PR G P P G
Sbjct: 176 GRPGTDATPGLPGPRGPPGPPGEAGQPGPQGDAG 209
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 3/56 (5%)
Frame = -3
Query: 714 GGPGXXXXX-PXXPPG--GXXGENXPKXXGXXXGXPPPXXPXXGGKXGXXGXPXPP 556
G PG P PPG G G + P G P P P G G G P PP
Sbjct: 213 GAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPP--GADGQSGPPGPP 266
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/53 (30%), Positives = 18/53 (33%), Gaps = 1/53 (1%)
Frame = -3
Query: 714 GGPGXXXXX-PXXPPGGXXGENXPKXXGXXXGXPPPXXPXXGGKXGXXGXPXP 559
G PG P PPG + P G P P G+ G G P P
Sbjct: 216 GEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPPGP 268
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 3/56 (5%)
Frame = -3
Query: 714 GGPGXXXXX-PXXPPG--GXXGENXPKXXGXXXGXPPPXXPXXGGKXGXXGXPXPP 556
G PG P PPG G G + P G P P P G G G P PP
Sbjct: 220 GAPGEAGDAGPAGPPGPPGAPGNDGPPGPPGPKGSPGPDGP--AGVDGQAGPPGPP 273
Score = 28.7 bits (61), Expect = 5.1
Identities = 25/94 (26%), Positives = 26/94 (27%), Gaps = 3/94 (3%)
Frame = +2
Query: 530 GTKNXPQKIGGXGFPXXPXFPPXXGXXGGGXPXKXPXXFGXFSPXXPPGGLXG-XXXXXP 706
G P + G G P P PP P P G P PPG P
Sbjct: 116 GKPGKPGRPGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTP 175
Query: 707 GPP--XXXXGXXXPRXRXGXPXTPXXXSPSXKKG 802
G P G PR G P P G
Sbjct: 176 GRPGTDATPGLPGPRGPPGPPGEAGQPGPQGDAG 209
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/69 (30%), Positives = 23/69 (33%), Gaps = 2/69 (2%)
Frame = -3
Query: 756 PXLXRGXXXPXXFXGGPGXXXXXPXXPPGGXXGENXPKXXGXXXGXPP--PXXPXXGGKX 583
P +G P G PG P PPG P G P P P G+
Sbjct: 157 PPGEQGPKGPDAAPGEPGPKG--PIGPPGPPGQAGAPGEPGSPAKSEPAVPGPPGPPGQA 214
Query: 582 GXXGXPXPP 556
G G P PP
Sbjct: 215 GQQGPPGPP 223
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/56 (37%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -3
Query: 729 PXXFXGGPGXXXXXPXXPPGGXXGENXPKXXGXXXGXP-PPXXPXXGGKXGXXGXP 565
P GGPG P PPGG GE G G P P P G G G P
Sbjct: 143 PPGAVGGPGPKG--PPGPPGG-PGELGGPGRGGNRGPPGPRGPPGEAGPDGEGGRP 195
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/60 (36%), Positives = 23/60 (38%), Gaps = 8/60 (13%)
Frame = -3
Query: 714 GGPGXXXXX----PXXPPG--GXXGENX-PKXXGXXXGXP-PPXXPXXGGKXGXXGXPXP 559
GGPG P PPG G GE P G P PP P G+ G G P P
Sbjct: 166 GGPGRGGNRGPPGPRGPPGEAGPDGEGGRPGQAGQTRSAPSPPGQPGQPGEPGSPGEPGP 225
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/56 (37%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -3
Query: 729 PXXFXGGPGXXXXXPXXPPGGXXGENXPKXXGXXXGXP-PPXXPXXGGKXGXXGXP 565
P GGPG P PPGG GE G G P P P G G G P
Sbjct: 143 PPGAVGGPGPKG--PPGPPGG-PGELGGPGRGGNRGPPGPRGPPGEAGPDGEGGRP 195
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/60 (36%), Positives = 23/60 (38%), Gaps = 8/60 (13%)
Frame = -3
Query: 714 GGPGXXXXX----PXXPPG--GXXGENX-PKXXGXXXGXP-PPXXPXXGGKXGXXGXPXP 559
GGPG P PPG G GE P G P PP P G+ G G P P
Sbjct: 166 GGPGRGGNRGPPGPRGPPGEAGPDGEGGRPGQAGQTRSAPSPPGQPGQPGEPGSPGEPGP 225
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 3/56 (5%)
Frame = -3
Query: 714 GGPGXXXXX-PXXPPG--GXXGENXPKXXGXXXGXPPPXXPXXGGKXGXXGXPXPP 556
G PG P PPG G G + P G P P P G G G P PP
Sbjct: 218 GAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPP--GVDGQSGPPGPP 271
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/53 (30%), Positives = 18/53 (33%), Gaps = 1/53 (1%)
Frame = -3
Query: 714 GGPGXXXXX-PXXPPGGXXGENXPKXXGXXXGXPPPXXPXXGGKXGXXGXPXP 559
G PG P PPG + P G P P G+ G G P P
Sbjct: 221 GEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGVDGQSGPPGPPGP 273
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = -3
Query: 687 PXXPPGGXXGENXPKXXGXXXGXPPPXXPXXGGKXGXXGXPXP 559
P PPG P G G PP P G+ G G P P
Sbjct: 260 PAGPPGPPGNNGAP---GGGYGVGPPGPPGPSGRPGAPGQPGP 299
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = -3
Query: 714 GGPGXXXXXPXXPPGGXXGENXPKXXGXXXGXPPPXXPXXGGKXGXXGXPXPP 556
GGPG P PPG + G PP P G G G P P
Sbjct: 184 GGPG-----PAGPPGPAGADGNTPSGGGEGPAGPPGPPGPAGNPGTDGAPGNP 231
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 29.5 bits (63), Expect = 2.9
Identities = 27/93 (29%), Positives = 28/93 (30%), Gaps = 2/93 (2%)
Frame = +2
Query: 530 GTKNXPQKIGGXGFPXXPXFPPXXGXXGGGXPXKXPXXFGXFSPXXPPGGLXGXXXXXPG 709
G P K G G P P PP P P G P PPG PG
Sbjct: 79 GKPGRPGKPGAPGLPGNPGHPPQQPCDPITPPPCQPCPQG---PPGPPG--------PPG 127
Query: 710 PPXXXXGXXXP--RXRXGXPXTPXXXSPSXKKG 802
P G P + G P P PS G
Sbjct: 128 PSGDAGGNGNPGSPGQDGQPGAPGNKGPSGPNG 160
>U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protein
73 protein.
Length = 285
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/61 (34%), Positives = 21/61 (34%), Gaps = 3/61 (4%)
Frame = -3
Query: 729 PXXFXGGPGXXXXXPXXPPG--GXXGENXPKXXGXXXGXP-PPXXPXXGGKXGXXGXPXP 559
P G PG P PPG G GE P G P P P G G G P
Sbjct: 145 PAGNAGNPG-----PKGPPGQPGAPGEQGPNGRPGAPGAPGPQGPPGTAGNDGTPGQPGA 199
Query: 558 P 556
P
Sbjct: 200 P 200
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 29.5 bits (63), Expect = 2.9
Identities = 26/85 (30%), Positives = 27/85 (31%), Gaps = 4/85 (4%)
Frame = +2
Query: 530 GTKNXPQKIGGXGFPXXPXFPPXXGXXGGGXPXKXPXXFGXFSPXXPPG--GLXGXXXXX 703
G P K G G P P PP P P G P PPG G G
Sbjct: 112 GKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSG-EPGS 170
Query: 704 PGPP--XXXXGXXXPRXRXGXPXTP 772
PG P G P+ G P P
Sbjct: 171 PGLPGQDAAPGEPGPKGPPGPPGAP 195
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 29.5 bits (63), Expect = 2.9
Identities = 26/85 (30%), Positives = 27/85 (31%), Gaps = 4/85 (4%)
Frame = +2
Query: 530 GTKNXPQKIGGXGFPXXPXFPPXXGXXGGGXPXKXPXXFGXFSPXXPPG--GLXGXXXXX 703
G P K G G P P PP P P G P PPG G G
Sbjct: 112 GKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPWKPCPQGPPGPPGPPGPPGDSG-EPGS 170
Query: 704 PGPP--XXXXGXXXPRXRXGXPXTP 772
PG P G P+ G P P
Sbjct: 171 PGLPGQDAAPGEPGPKGPKGPPGAP 195
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/57 (38%), Positives = 22/57 (38%), Gaps = 4/57 (7%)
Frame = -3
Query: 714 GGPGXXXXXPXXPPG--GXXGE--NXPKXXGXXXGXPPPXXPXXGGKXGXXGXPXPP 556
GGPG P PPG G GE N P G PP P G G G P P
Sbjct: 171 GGPG-----PPGPPGPEGAPGEDGNTPSRGGVGEAGPP-GPPGTSGNPGTDGAPGNP 221
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 29.5 bits (63), Expect = 2.9
Identities = 26/85 (30%), Positives = 27/85 (31%), Gaps = 4/85 (4%)
Frame = +2
Query: 530 GTKNXPQKIGGXGFPXXPXFPPXXGXXGGGXPXKXPXXFGXFSPXXPPG--GLXGXXXXX 703
G P K G G P P PP P P G P PPG G G
Sbjct: 112 GKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSG-EPGS 170
Query: 704 PGPP--XXXXGXXXPRXRXGXPXTP 772
PG P G P+ G P P
Sbjct: 171 PGLPGQDAAPGEPGPKGPPGPPGAP 195
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/74 (27%), Positives = 20/74 (27%)
Frame = +2
Query: 566 GFPXXPXFPPXXGXXGGGXPXKXPXXFGXFSPXXPPGGLXGXXXXXPGPPXXXXGXXXPR 745
GF PP P P G SP PP PP G P
Sbjct: 224 GFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 283
Query: 746 XRXGXPXTPXXXSP 787
G P P SP
Sbjct: 284 PAGGSPPPPRAGSP 297
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/74 (27%), Positives = 20/74 (27%)
Frame = +2
Query: 566 GFPXXPXFPPXXGXXGGGXPXKXPXXFGXFSPXXPPGGLXGXXXXXPGPPXXXXGXXXPR 745
GF PP P P G SP PP PP G P
Sbjct: 245 GFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 304
Query: 746 XRXGXPXTPXXXSP 787
G P P SP
Sbjct: 305 PAGGSPPPPRAGSP 318
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/74 (27%), Positives = 20/74 (27%)
Frame = +2
Query: 566 GFPXXPXFPPXXGXXGGGXPXKXPXXFGXFSPXXPPGGLXGXXXXXPGPPXXXXGXXXPR 745
GF PP P P G SP PP PP G P
Sbjct: 230 GFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 289
Query: 746 XRXGXPXTPXXXSP 787
G P P SP
Sbjct: 290 PAGGSPPPPRAGSP 303
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/71 (26%), Positives = 21/71 (29%)
Frame = -3
Query: 771 GVXGXPXLXRGXXXPXXFXGGPGXXXXXPXXPPGGXXGENXPKXXGXXXGXPPPXXPXXG 592
G G P G P G P PPGG + P G P
Sbjct: 178 GNAGPPGAPGGPGAPGNTPSGGAAGPPGPPGPPGGPGNDGQPGGPGNPGA--PGAVTEVP 235
Query: 591 GKXGXXGXPXP 559
G+ G G P P
Sbjct: 236 GQQGPPGPPGP 246
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = -3
Query: 711 GPGXXXXXPXXPPGGXXGENXPKXXGXXXGXPPPXXPXXGGKXGXXGXPXPPI 553
GP PPGG P+ G PPP G G G PP+
Sbjct: 762 GPSPVPRPAPAPPGGRQAPMPPR--GGPGAPPPPGMRPPPGAPGGGGGMYPPL 812
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = -3
Query: 711 GPGXXXXXPXXPPGGXXGENXPKXXGXXXGXPPPXXPXXGGKXGXXGXPXPPI 553
GP PPGG P+ G PPP G G G PP+
Sbjct: 762 GPSPVPRPAPAPPGGRQAPMPPR--GGPGAPPPPGMRPPPGAPGGGGGMYPPL 812
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 29.1 bits (62), Expect = 3.9
Identities = 24/91 (26%), Positives = 26/91 (28%)
Frame = +2
Query: 530 GTKNXPQKIGGXGFPXXPXFPPXXGXXGGGXPXKXPXXFGXFSPXXPPGGLXGXXXXXPG 709
G P K G G P P PP P P G P PPG P
Sbjct: 112 GKPGRPGKPGAPGLPGNPGRPPQQPCDPITPPPCQPCPQGPPGPPGPPG---------PS 162
Query: 710 PPXXXXGXXXPRXRXGXPXTPXXXSPSXKKG 802
G + G P P PS + G
Sbjct: 163 GDAGSNGNPGSPGQDGQPGAPGNKGPSGQNG 193
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 6/57 (10%)
Frame = -3
Query: 708 PGXXXXXPXXPPGGXXGENXPKXXGXXXGXP------PPXXPXXGGKXGXXGXPXPP 556
PG P P G P G G P PP P G G G P PP
Sbjct: 281 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 337
>U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like
protease protein 6 protein.
Length = 360
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 212 THVINLRRTWGKTCSGXSCCRNHRKTPLMCSSSH 313
T+V N+ TW K CSG H T C++++
Sbjct: 62 TNVKNIDETWSKHCSGTLTSPRHILTATHCAATY 95
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 6/57 (10%)
Frame = -3
Query: 708 PGXXXXXPXXPPGGXXGENXPKXXGXXXGXP------PPXXPXXGGKXGXXGXPXPP 556
PG P P G P G G P PP P G G G P PP
Sbjct: 291 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 347
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = -3
Query: 711 GPGXXXXXPXXPPGGXXGENXPKXXGXXXGXPPPXXPXXGGKXGXXGXPXPPI 553
GP PPGG P+ G PPP G G G PP+
Sbjct: 762 GPSPVPRPAPAPPGGRQAPMPPR--GGPGAPPPPGMRPPPGAPGGGGGMYPPL 812
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = -3
Query: 711 GPGXXXXXPXXPPGGXXGENXPKXXGXXXGXPPPXXPXXGGKXGXXGXPXPPI 553
GP PPGG P+ G PPP G G G PP+
Sbjct: 762 GPSPVPRPAPAPPGGRQAPMPPR--GGPGAPPPPGMRPPPGAPGGGGGMYPPL 812
>AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen protein
45 protein.
Length = 327
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Frame = -3
Query: 687 PXXPPG--GXXGENXPKXXGXXXGXPPPXXPXXGGKXGXXGXPXPP 556
P PPG G GE G PP P G+ G G P PP
Sbjct: 226 PPGPPGYPGRPGETGDHGK-TIAGEAPPGPPGRQGEMGPQGPPGPP 270
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = +2
Query: 530 GTKNXPQKIGGXGFPXXPXFPPXXGXXGGGXPXKXPXXFGXFSPXXPPG 676
G P K G G P P PP P P G P PPG
Sbjct: 117 GKPGRPGKAGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPAGPPGPPG 165
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 28.7 bits (61), Expect = 5.1
Identities = 27/93 (29%), Positives = 28/93 (30%), Gaps = 2/93 (2%)
Frame = +2
Query: 530 GTKNXPQKIGGXGFPXXPXFPPXXGXXGGGXPXKXPXXFGXFSPXXPPGGLXGXXXXXPG 709
G P K G G P P PP P P G P PPG PG
Sbjct: 112 GKPGRPGKPGAPGLPGNPGRPPQQPCDPITPPPCQPCPQG---PPGPPG--------PPG 160
Query: 710 PPXXXXGXXXP--RXRXGXPXTPXXXSPSXKKG 802
P G P + G P P PS G
Sbjct: 161 PSGDAGGNGNPGSPGQDGQPGAPGNKGPSGPNG 193
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/73 (27%), Positives = 21/73 (28%), Gaps = 1/73 (1%)
Frame = -3
Query: 771 GVXGXPXLXRGXXXPXXFX-GGPGXXXXXPXXPPGGXXGENXPKXXGXXXGXPPPXXPXX 595
G G P G P GGPG P G G + G P P
Sbjct: 195 GNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGA 254
Query: 594 GGKXGXXGXPXPP 556
G G G P P
Sbjct: 255 AGAPGADGNPGGP 267
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = -3
Query: 714 GGPGXXXXXPXXPPGGXXGENXPKXXGXXXGXPPPXXPXXGGKXGXXGXPXPP 556
GGP P PPG + P G P P G G G P P
Sbjct: 152 GGP-PGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAP 203
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/73 (27%), Positives = 21/73 (28%), Gaps = 1/73 (1%)
Frame = -3
Query: 771 GVXGXPXLXRGXXXPXXFX-GGPGXXXXXPXXPPGGXXGENXPKXXGXXXGXPPPXXPXX 595
G G P G P GGPG P G G + G P P
Sbjct: 195 GNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGA 254
Query: 594 GGKXGXXGXPXPP 556
G G G P P
Sbjct: 255 AGAPGADGNPGGP 267
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = -3
Query: 714 GGPGXXXXXPXXPPGGXXGENXPKXXGXXXGXPPPXXPXXGGKXGXXGXPXPP 556
GGP P PPG + P G P P G G G P P
Sbjct: 152 GGP-PGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAP 203
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/53 (32%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = -3
Query: 714 GGPGXXXXXPXXPPGGXXGENXPKXXGXXXGXPP-PXXPXXGGKXGXXGXPXP 559
G PG P G G+N K G P P GG+ G G P P
Sbjct: 148 GRPGPRGPPGEVGPAGPSGDNGRKGPPGPPGGPGGPGEGGDGGRPGNPGRPGP 200
>U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protein
114 protein.
Length = 321
Score = 28.7 bits (61), Expect = 5.1
Identities = 23/77 (29%), Positives = 25/77 (32%), Gaps = 6/77 (7%)
Frame = -3
Query: 741 GXXXPXXFXGGPGXXXXXPXXPPGGXXGENXPKXXGXXX------GXPPPXXPXXGGKXG 580
G P G PG P PPG + P G G P P P G G
Sbjct: 193 GRNGPDGPNGEPG-----PKGPPGQPGADGQPGMPGEPGKDAPQEGSPVPGDPGPPGDSG 247
Query: 579 XXGXPXPPIFWGXFFVP 529
G P PP G +P
Sbjct: 248 IPGPPGPPGMAGPDGIP 264
>U21308-11|AAB93312.3| 265|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform b
protein.
Length = 265
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/62 (27%), Positives = 18/62 (29%)
Frame = -3
Query: 741 GXXXPXXFXGGPGXXXXXPXXPPGGXXGENXPKXXGXXXGXPPPXXPXXGGKXGXXGXPX 562
G P G PG PPG P G P P G+ G G
Sbjct: 198 GPIGPPGPKGNPGPDGQSYQGPPGPPGDSGTPGHEGRAGPNGPAGPPGDNGEKGDCGHCP 257
Query: 561 PP 556
PP
Sbjct: 258 PP 259
>U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform a
protein.
Length = 329
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/62 (27%), Positives = 18/62 (29%)
Frame = -3
Query: 741 GXXXPXXFXGGPGXXXXXPXXPPGGXXGENXPKXXGXXXGXPPPXXPXXGGKXGXXGXPX 562
G P G PG PPG P G P P G+ G G
Sbjct: 262 GPIGPPGPKGNPGPDGQSYQGPPGPPGDSGTPGHEGRAGPNGPAGPPGDNGEKGDCGHCP 321
Query: 561 PP 556
PP
Sbjct: 322 PP 323
>M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein.
Length = 329
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/62 (27%), Positives = 18/62 (29%)
Frame = -3
Query: 741 GXXXPXXFXGGPGXXXXXPXXPPGGXXGENXPKXXGXXXGXPPPXXPXXGGKXGXXGXPX 562
G P G PG PPG P G P P G+ G G
Sbjct: 262 GPIGPPGPKGNPGPDGQSYQGPPGPPGDSGTPGHEGRAGPNGPAGPPGDNGEKGDCGHCP 321
Query: 561 PP 556
PP
Sbjct: 322 PP 323
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/73 (27%), Positives = 21/73 (28%), Gaps = 1/73 (1%)
Frame = -3
Query: 771 GVXGXPXLXRGXXXPXXFX-GGPGXXXXXPXXPPGGXXGENXPKXXGXXXGXPPPXXPXX 595
G G P G P GGPG P G G + G P P
Sbjct: 195 GNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGA 254
Query: 594 GGKXGXXGXPXPP 556
G G G P P
Sbjct: 255 AGAPGADGNPGGP 267
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = -3
Query: 714 GGPGXXXXXPXXPPGGXXGENXPKXXGXXXGXPPPXXPXXGGKXGXXGXPXPP 556
GGP P PPG + P G P P G G G P P
Sbjct: 152 GGP-PGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAP 203
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/73 (27%), Positives = 21/73 (28%), Gaps = 1/73 (1%)
Frame = -3
Query: 771 GVXGXPXLXRGXXXPXXFX-GGPGXXXXXPXXPPGGXXGENXPKXXGXXXGXPPPXXPXX 595
G G P G P GGPG P G G + G P P
Sbjct: 195 GNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGA 254
Query: 594 GGKXGXXGXPXPP 556
G G G P P
Sbjct: 255 AGAPGADGNPGGP 267
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = -3
Query: 714 GGPGXXXXXPXXPPGGXXGENXPKXXGXXXGXPPPXXPXXGGKXGXXGXPXPP 556
GGP P PPG + P G P P G G G P P
Sbjct: 152 GGP-PGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAP 203
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 636 GXXXGXPPPXXPXXGGKXGXXGXPXPP 556
G G PP P GG G G P PP
Sbjct: 620 GPGGGGGPPRGPGGGGGGGPTGPPAPP 646
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 648 GXFPPXXPXGXXGGXXXXPPAPXK 719
G PP P G GG PPAP K
Sbjct: 624 GGGPPRGPGGGGGGGPTGPPAPPK 647
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 636 GXXXGXPPPXXPXXGGKXGXXGXPXPP 556
G G PP P GG G G P PP
Sbjct: 620 GPGGGGGPPRGPGGGGGGGPTGPPAPP 646
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 648 GXFPPXXPXGXXGGXXXXPPAPXK 719
G PP P G GG PPAP K
Sbjct: 624 GGGPPRGPGGGGGGGPTGPPAPPK 647
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = -3
Query: 714 GGPGXXXXXPXXPPGGXXGENXPKXXGXXXGXPPPXXPXXGGKXGXXGXPXPP 556
G PG P G G P G PPP P G G G P P
Sbjct: 181 GPPGPPGPDGNAGPAGAPG--VPGPDGDAGSPPPPGPPGPPGPPGNDGQPGAP 231
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/55 (32%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
Frame = -3
Query: 714 GGPGXXXXXPXXPPG--GXXGENXPKXXGXXXGXPPPXXPXXGGKXGXXGXPXPP 556
GGPG P PPG G G++ PP P G+ G G P P
Sbjct: 249 GGPG-----PAGPPGPPGPPGQDGSGGAAQPGPPGPPGPPGNDGQPGGPGQPGGP 298
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 28.3 bits (60), Expect = 6.8
Identities = 27/93 (29%), Positives = 27/93 (29%), Gaps = 2/93 (2%)
Frame = +2
Query: 530 GTKNXPQKIGGXGFPXXPXFPPXXGXXGGGXPXKXPXXFGXFSPXXPPG--GLXGXXXXX 703
G P K G G P PP P P G P PPG G G
Sbjct: 102 GRAGRPGKPGAPGLNGNPGRPPKEPCEPITPPPCKPCPEGPPGPAGPPGPQGNKG-PLGP 160
Query: 704 PGPPXXXXGXXXPRXRXGXPXTPXXXSPSXKKG 802
PGPP G P G P K G
Sbjct: 161 PGPP----GPEGPNGTAGNKGPAGPPGPGGKPG 189
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/61 (27%), Positives = 18/61 (29%)
Frame = -3
Query: 741 GXXXPXXFXGGPGXXXXXPXXPPGGXXGENXPKXXGXXXGXPPPXXPXXGGKXGXXGXPX 562
G P G G PGG G P G P P P G+ G G
Sbjct: 162 GPPGPEGPNGTAGNKGPAGPPGPGGKPGPAGPPGENGRNGEPQPGSPGEPGRPGQPGSRG 221
Query: 561 P 559
P
Sbjct: 222 P 222
>Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical
protein Y69H2.14 protein.
Length = 338
Score = 27.9 bits (59), Expect = 9.0
Identities = 21/75 (28%), Positives = 23/75 (30%), Gaps = 3/75 (4%)
Frame = -3
Query: 771 GVXGXPXLXRGXXXPXXFXGGPG-XXXXXPXXPPGGXXGENXPKXXGXXXGXP--PPXXP 601
G G P P GPG P PPG + P G P PP
Sbjct: 240 GQDGHPGDAGAPGAPGQVVAGPGSVGPPGPQGPPGLAGPDGQPGHGGGGQPGPQGPPGDD 299
Query: 600 XXGGKXGXXGXPXPP 556
G+ G G P P
Sbjct: 300 GHPGEDGGAGGPGQP 314
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = -3
Query: 714 GGPGXXXXXPXXPPGGXXGENXPKXXGXXXGXPPPXXPXXGGKXGXXGXPXPP 556
GG G GG G G G P P GG+ G G P P
Sbjct: 85 GGAGGGGGYGAGGGGGGGGGEAAGGGGGCTGCCNPGPPGPGGRPGKPGTPGKP 137
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/56 (32%), Positives = 19/56 (33%), Gaps = 3/56 (5%)
Frame = -3
Query: 714 GGPGXXXXX-PXXPPG--GXXGENXPKXXGXXXGXPPPXXPXXGGKXGXXGXPXPP 556
G PG P PPG G G N G P G+ G G P PP
Sbjct: 171 GAPGDAGKDGPPGPPGPDGDSGPNGEAGPNGEPGAPGKDGEKGKGEPGPAGPPGPP 226
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = -3
Query: 714 GGPGXXXXXPXXPPGGXXGENXPKXXGXXXGXPPPXXPXXGGKXGXXGXPXPP 556
GGP P PPG G PP P G+ G G P P
Sbjct: 209 GGP-PGQPGPDGPPGAPGNAGEDGKPGDQGPRGPPGIPGAPGQPGRPGPPGEP 260
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = -3
Query: 714 GGPGXXXXXPXXPPGGXXGENXPKXXGXXXGXPPPXXPXXGGKXGXXGXPXPP 556
GGP P PPG G PP P G+ G G P P
Sbjct: 190 GGP-PGQPGPDGPPGAPGNAGEDGKPGDQGPRGPPGIPGAPGQPGRPGPPGEP 241
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +2
Query: 572 PXXPXFPPXXGXXGGGXPXKXPXXFGXFSPXXPPGGLXGXXXXXPGP 712
P P P G GG P P G +P P G P P
Sbjct: 1426 PNEPSNPSILGPSTGGDPSPGPSPNGPSNPSVPESSTGGGPSPGPAP 1472
>AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen
protein 116 protein.
Length = 313
Score = 27.9 bits (59), Expect = 9.0
Identities = 22/77 (28%), Positives = 25/77 (32%), Gaps = 1/77 (1%)
Frame = -3
Query: 771 GVXGXPXLXRGXXXPXXFXGGPGXXXXXPXXPPGGXXGENXPKXXGXXXGXPP-PXXPXX 595
G+ G P + GG P PPG G N P G P P
Sbjct: 128 GLDGDPGTTATRQMAMDYTGG-SECVKCPAGPPGAP-GPNGPPGYEGQMGVPGLPGDGPT 185
Query: 594 GGKXGXXGXPXPPIFWG 544
G G G P PP + G
Sbjct: 186 PGSPGPPGPPGPPGYPG 202
>AC024838-8|AAF60822.1| 234|Caenorhabditis elegans Thaumatin family
protein 6 protein.
Length = 234
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 197 RRADGTHVINLRRTWGKTCSGXSCCRNHRKTPLMCSSSH 313
RR+ +V+ R S CCR + +TP C SH
Sbjct: 159 RRSVNNNVVGCRSPCDALRSDRECCRGNFETPDKCFRSH 197
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,737,810
Number of Sequences: 27780
Number of extensions: 367634
Number of successful extensions: 1513
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1350
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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