Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_FL5_E20
(837 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 26 0.50
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 2.6
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 2.6
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 2.6
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 2.6
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 23 2.6
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 23 2.6
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 23 3.5
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 6.1
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 6.1
AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein. 22 6.1
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 25.8 bits (54), Expect = 0.50
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -2
Query: 539 ACPNDQSFRLLKYVLSMKLLRGSWGCSVCR 450
A P D + + +YV+ K+ +GSW + R
Sbjct: 897 AAPYDGNSPIKRYVIEYKISKGSWETDIDR 926
Score = 22.2 bits (45), Expect = 6.1
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 392 GNSPLKRPISDY-VKSGF--INVDKPSNPSSHEVVSWI 496
GNSP+KR + +Y + G ++D+ P S + V+ +
Sbjct: 902 GNSPIKRYVIEYKISKGSWETDIDRVLVPGSQQNVAGV 939
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 23.4 bits (48), Expect = 2.6
Identities = 10/37 (27%), Positives = 16/37 (43%)
Frame = -3
Query: 835 PASQXTQTPQYSCPGRIQEFTVVHRPDTQLSLHGRYK 725
P + + QY I + + PDT +HG +K
Sbjct: 120 PRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFK 156
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.4 bits (48), Expect = 2.6
Identities = 10/37 (27%), Positives = 16/37 (43%)
Frame = -3
Query: 835 PASQXTQTPQYSCPGRIQEFTVVHRPDTQLSLHGRYK 725
P + + QY I + + PDT +HG +K
Sbjct: 120 PRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFK 156
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.4 bits (48), Expect = 2.6
Identities = 10/37 (27%), Positives = 16/37 (43%)
Frame = -3
Query: 835 PASQXTQTPQYSCPGRIQEFTVVHRPDTQLSLHGRYK 725
P + + QY I + + PDT +HG +K
Sbjct: 171 PRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFK 207
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 23.4 bits (48), Expect = 2.6
Identities = 10/37 (27%), Positives = 16/37 (43%)
Frame = -3
Query: 835 PASQXTQTPQYSCPGRIQEFTVVHRPDTQLSLHGRYK 725
P + + QY I + + PDT +HG +K
Sbjct: 120 PRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFK 156
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.4 bits (48), Expect = 2.6
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = +1
Query: 574 HRPRHETRQITTERWQRVCSRFQLAFSRREY 666
HR RH T ++T + R+ Q S Y
Sbjct: 193 HRQRHSTIHLSTGNYSRLACEIQFVRSMGYY 223
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 23.4 bits (48), Expect = 2.6
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 347 RSFSTTKASKRCPASSRSP 291
+ FS++ +R P+SSRSP
Sbjct: 26 KRFSSSIVDRRSPSSSRSP 44
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 23.0 bits (47), Expect = 3.5
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 657 TAECKLKTATYSLPAFCCDLTSLVARSMQTIRQPVT 550
T + KL TY+L CDLT R + +R +T
Sbjct: 351 TVQNKLYEETYALAPAGCDLTIDNLRKAKYLRACIT 386
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 6.1
Identities = 5/14 (35%), Positives = 11/14 (78%)
Frame = +2
Query: 464 NPSSHEVVSWIKRI 505
+P +H++ W+KR+
Sbjct: 335 SPQTHKMAPWVKRV 348
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 6.1
Identities = 5/14 (35%), Positives = 11/14 (78%)
Frame = +2
Query: 464 NPSSHEVVSWIKRI 505
+P +H++ W+KR+
Sbjct: 335 SPQTHKMAPWVKRV 348
>AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein.
Length = 200
Score = 22.2 bits (45), Expect = 6.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 753 RSCRFTADISGXLWNRAPRSFSKPCVTF 670
+SCR+TA ++G N AP S + P V +
Sbjct: 146 KSCRYTASLAG---NVAPAS-ADPMVNY 169
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 238,594
Number of Sequences: 438
Number of extensions: 5259
Number of successful extensions: 19
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26824317
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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