Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_FL5_D17
         (978 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC002961-1|AAH02961.1|  514|Homo sapiens WAS protein protein.          27   2.9  
U19927-1|AAC50140.1|  502|Homo sapiens WAS protein.                    27   2.9  
U12707-1|AAA62663.1|  502|Homo sapiens Wiskott-Aldrich syndrome ...    27   2.9  
BC012738-1|AAH12738.1|  502|Homo sapiens Wiskott-Aldrich syndrom...    27   2.9  

>BC002961-1|AAH02961.1|  514|Homo sapiens WAS protein protein.
          Length = 514

 Score = 26.6 bits (56), Expect(2) = 2.9
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -2

Query: 974 PPPXXGGXXXPPPXXXGGGG 915
           PPP  GG   PPP   G  G
Sbjct: 372 PPPGRGGPPPPPPPATGRSG 391



 Score = 24.2 bits (50), Expect(2) = 2.9
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -2

Query: 809 PPPPPPXXXXPXGG 768
           PPPPPP    P  G
Sbjct: 406 PPPPPPPPPPPSSG 419


>U19927-1|AAC50140.1|  502|Homo sapiens WAS protein.
          Length = 502

 Score = 26.6 bits (56), Expect(2) = 2.9
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -2

Query: 974 PPPXXGGXXXPPPXXXGGGG 915
           PPP  GG   PPP   G  G
Sbjct: 360 PPPGRGGPPPPPPPATGRSG 379



 Score = 24.2 bits (50), Expect(2) = 2.9
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -2

Query: 809 PPPPPPXXXXPXGG 768
           PPPPPP    P  G
Sbjct: 394 PPPPPPPPPPPSSG 407


>U12707-1|AAA62663.1|  502|Homo sapiens Wiskott-Aldrich syndrome
           protein protein.
          Length = 502

 Score = 26.6 bits (56), Expect(2) = 2.9
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -2

Query: 974 PPPXXGGXXXPPPXXXGGGG 915
           PPP  GG   PPP   G  G
Sbjct: 360 PPPGRGGPPPPPPPATGRSG 379



 Score = 24.2 bits (50), Expect(2) = 2.9
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -2

Query: 809 PPPPPPXXXXPXGG 768
           PPPPPP    P  G
Sbjct: 394 PPPPPPPPPPPSSG 407


>BC012738-1|AAH12738.1|  502|Homo sapiens Wiskott-Aldrich syndrome
           (eczema-thrombocytopenia) protein.
          Length = 502

 Score = 26.6 bits (56), Expect(2) = 2.9
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -2

Query: 974 PPPXXGGXXXPPPXXXGGGG 915
           PPP  GG   PPP   G  G
Sbjct: 360 PPPGRGGPPPPPPPATGRSG 379



 Score = 24.2 bits (50), Expect(2) = 2.9
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -2

Query: 809 PPPPPPXXXXPXGG 768
           PPPPPP    P  G
Sbjct: 394 PPPPPPPPPPPSSG 407


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.315    0.146    0.497 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,882,397
Number of Sequences: 237096
Number of extensions: 2576895
Number of successful extensions: 20916
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12853
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 13047299170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)