Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP07_FL5_D08
         (806 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    27   0.16 
04_04_0137 - 23053148-23053798,23053911-23054146,23054268-230544...    27   0.16 
01_05_0490 + 22672241-22674679                                         27   0.17 
01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373...    27   1.0  
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504...    25   5.1  
01_01_0929 - 7344911-7345978                                           25   5.3  
07_01_0080 + 587674-588510                                             29   5.8  

>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 27.5 bits (58), Expect(2) = 0.16
 Identities = 11/30 (36%), Positives = 11/30 (36%)
 Frame = +2

Query: 674 PPPPPPPXXXXXXXXXXXXXXXXXXPPPXP 763
           PPPPPPP                  PPP P
Sbjct: 665 PPPPPPPPRSSSRTPTGAATSSKGPPPPPP 694



 Score = 25.0 bits (52), Expect(2) = 0.16
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +2

Query: 665 RXXPPPPPPP 694
           R  PPPPPPP
Sbjct: 615 RSVPPPPPPP 624


>04_04_0137 -
           23053148-23053798,23053911-23054146,23054268-23054458,
           23054587-23056010
          Length = 833

 Score = 27.5 bits (58), Expect(2) = 0.16
 Identities = 11/30 (36%), Positives = 11/30 (36%)
 Frame = +2

Query: 674 PPPPPPPXXXXXXXXXXXXXXXXXXPPPXP 763
           PPPPPPP                  PPP P
Sbjct: 370 PPPPPPPPPAVTQQQDVKTSCGPAVPPPPP 399



 Score = 25.0 bits (52), Expect(2) = 0.16
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +2

Query: 665 RXXPPPPPPP 694
           R  PPPPPPP
Sbjct: 364 RPPPPPPPPP 373


>01_05_0490 + 22672241-22674679
          Length = 812

 Score = 27.5 bits (58), Expect(2) = 0.17
 Identities = 11/30 (36%), Positives = 11/30 (36%)
 Frame = +2

Query: 674 PPPPPPPXXXXXXXXXXXXXXXXXXPPPXP 763
           PPPPPPP                  PPP P
Sbjct: 641 PPPPPPPTTRRSRKPPQPPSRPAPPPPPPP 670



 Score = 25.0 bits (52), Expect(2) = 0.17
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +2

Query: 665 RXXPPPPPPP 694
           R  PPPPPPP
Sbjct: 605 RRPPPPPPPP 614


>01_06_0823 + 32234588-32234936,32236354-32237093,32237260-32237343,
            32237909-32239263,32240399-32240460,32240544-32241144,
            32241229-32241310,32241778-32241840
          Length = 1111

 Score = 27.5 bits (58), Expect(2) = 1.0
 Identities = 11/30 (36%), Positives = 11/30 (36%)
 Frame = +2

Query: 674  PPPPPPPXXXXXXXXXXXXXXXXXXPPPXP 763
            PPPPPPP                  PPP P
Sbjct: 965  PPPPPPPNVAPPPFTRQDIPPPPPSPPPLP 994



 Score = 22.2 bits (45), Expect(2) = 1.0
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +2

Query: 665 RXXPPPPPP 691
           R  PPPPPP
Sbjct: 963 RPPPPPPPP 971


>07_01_0674 +
           5047503-5047646,5047808-5047901,5048743-5048828,
           5049380-5049429,5049517-5049586,5049668-5049749,
           5049867-5050267,5050414-5050941,5051823-5052044
          Length = 558

 Score = 25.0 bits (52), Expect(2) = 5.1
 Identities = 10/28 (35%), Positives = 10/28 (35%)
 Frame = +2

Query: 674 PPPPPPPXXXXXXXXXXXXXXXXXXPPP 757
           PPPPPPP                  PPP
Sbjct: 383 PPPPPPPDTRPPFMAPGVNARPLPPPPP 410



 Score = 22.2 bits (45), Expect(2) = 5.1
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +2

Query: 665 RXXPPPPPP 691
           R  PPPPPP
Sbjct: 381 RFPPPPPPP 389


>01_01_0929 - 7344911-7345978
          Length = 355

 Score = 25.0 bits (52), Expect(2) = 5.3
 Identities = 10/28 (35%), Positives = 10/28 (35%)
 Frame = +2

Query: 674 PPPPPPPXXXXXXXXXXXXXXXXXXPPP 757
           PPPPPPP                  PPP
Sbjct: 33  PPPPPPPFCPHLSVPCVGLPLPPPCPPP 60



 Score = 22.2 bits (45), Expect(2) = 5.3
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +2

Query: 665 RXXPPPPPP 691
           R  PPPPPP
Sbjct: 31  RRPPPPPPP 39


>07_01_0080 + 587674-588510
          Length = 278

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 12/33 (36%), Positives = 12/33 (36%)
 Frame = +2

Query: 665 RXXPPPPPPPXXXXXXXXXXXXXXXXXXPPPXP 763
           R  PPPPPPP                  PPP P
Sbjct: 89  RRPPPPPPPPPSSGSPPPPPPPPPPPPPPPPPP 121


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,673,637
Number of Sequences: 37544
Number of extensions: 486387
Number of successful extensions: 8610
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6944
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)