Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_FL5_C08
(908 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 33 0.24
05_03_0366 - 13102147-13102281,13102560-13102739,13102791-131029... 32 0.55
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 32 0.72
08_02_0329 - 15833124-15833825 31 1.3
05_06_0282 + 26915249-26915881 31 1.7
11_06_0411 - 23230580-23230795,23231407-23231862,23232142-232321... 30 2.2
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 30 2.9
06_03_0650 + 23157130-23157582,23157687-23157898,23157982-231581... 30 2.9
08_02_1291 + 25930056-25930067,25930289-25930334,25930434-259305... 29 3.9
07_01_0479 + 3606663-3607448 29 5.1
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 5.1
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 29 6.7
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 29 6.7
07_03_0600 + 19866757-19867218,19867920-19868429 29 6.7
02_01_0296 + 1978565-1981197,1981216-1981639,1982280-1982771,198... 29 6.7
07_03_0809 - 21669632-21669637,21669871-21670131,21670573-216707... 28 8.9
02_05_0686 - 30900748-30902167,30903442-30904742 28 8.9
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 28 8.9
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 33.5 bits (73), Expect = 0.24
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = +1
Query: 670 AGPGGXPPXPXXPXLXRGXPPPAPXXXRPRPVXAXGAXGXLRXPXAXLSRXSXXHXPP 843
AG G PP P P PP P P P A G G P A PP
Sbjct: 343 AGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGGPPPPALPGGPRARGPPP 400
>05_03_0366 -
13102147-13102281,13102560-13102739,13102791-13102992,
13104385-13104575
Length = 235
Score = 32.3 bits (70), Expect = 0.55
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -2
Query: 343 HQPSAAAPFPCVPTQSFVDPIHLKICQYPHGGLGLTNVSMSQM-QGQVDYDFGVGG 179
H P AAA P VP++ P L + GG GL S S + G + D G+GG
Sbjct: 7 HSPRAAAAAPSVPSR-LPRPFLLSLSSPSRGGSGLVAASASAVAAGGSEGDGGIGG 61
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 31.9 bits (69), Expect = 0.72
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +1
Query: 673 GPGGXPPXPXXPXLXRGXPPPAPXXXRPRPVXAXG 777
GPG PP P P PPP P P P G
Sbjct: 135 GPGQEPPPPHVPKAAPPPPPPPPPHAPPGPPPTKG 169
>08_02_0329 - 15833124-15833825
Length = 233
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
Frame = +1
Query: 670 AGPGGX----PPXPXXPXLXRGXPPPAPXXXRPR 759
AG GG PP P P L G PPP P R R
Sbjct: 180 AGSGGQAAAAPPLPPLPVLAAGPPPPTPPARRRR 213
>05_06_0282 + 26915249-26915881
Length = 210
Score = 30.7 bits (66), Expect = 1.7
Identities = 19/56 (33%), Positives = 21/56 (37%)
Frame = -1
Query: 779 APXAXTGRGRXXXGAGGGXPRXRXGXXGXGGXPPGPALXVXPXXGXIQSHXXGSXT 612
AP + GR A GG G G PPGP V P G + S S T
Sbjct: 60 APPSPRPHGRVTPLADGGGGGVLRRPPGRGPPPPGPGGHVGPLSGGVSSSAGRSST 115
>11_06_0411 -
23230580-23230795,23231407-23231862,23232142-23232195,
23232251-23232367
Length = 280
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 241 VRVHRADTGRSSNELDRQTTELERRGMGLQHLAGVLGTL 357
V+ H + R S EL+RQ ELER+G L+ G L +
Sbjct: 89 VQRHGEELERQSRELERQREELERQGRELKMKDGKLNRM 127
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/58 (31%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Frame = +1
Query: 595 FPSXXPVXEPXXCDWIXPXXGXTXNAGPGGXPPXPXXPXLXRGXP--PPAPXXXRPRP 762
FP+ P P P T + GP PP P P P P AP P P
Sbjct: 662 FPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPPANRTNGPGVPSAPPPPPPPP 719
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Frame = +1
Query: 646 PXXGXTXNAG-PGGXPPXPXXPXLXRGXPPPAPXXXRPRPVXA 771
P T G P PP P P R P AP P P+ A
Sbjct: 698 PPANRTNGPGVPSAPPPPPPPPPANRSNGPSAPAPPLPPPLPA 740
>06_03_0650 +
23157130-23157582,23157687-23157898,23157982-23158128,
23158214-23158347,23158442-23158551,23158711-23158817,
23159045-23159183,23159286-23159402,23159737-23159844,
23159927-23159998,23160108-23160230,23160336-23160495,
23160585-23160706,23160825-23160962,23161042-23161184,
23161305-23161367,23161567-23161630,23161709-23161844,
23162123-23162196,23162764-23162858,23162951-23162982,
23163104-23163276
Length = 973
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -1
Query: 755 GRXXXGAGGGXPRXRXGXXGXGGXPPGPALXVXP 654
G G GGG R G G G PGP L P
Sbjct: 62 GGKKCGGGGGRRRGGRGRGGRAGAGPGPGLAAAP 95
>08_02_1291 +
25930056-25930067,25930289-25930334,25930434-25930546,
25930645-25930930,25931357-25931421,25931642-25931693,
25931774-25931883,25932611-25932641,25932853-25933004,
25934622-25934840
Length = 361
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 256 HGGLGLTNVSMSQMQGQVDYDFGVGGRLPI 167
+GG L ++Q G Y +G GGRLP+
Sbjct: 100 YGGPALPRYGIAQFPGGSGYPYGYGGRLPM 129
>07_01_0479 + 3606663-3607448
Length = 261
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +1
Query: 670 AGPGGXPPXPXXPXLXRGXPPPAPXXXRP 756
A PGG PP P P + RG PP P RP
Sbjct: 196 AFPGGPPPPPG-PFM-RGPPPMGPPQVRP 222
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +1
Query: 676 PGGXPPXPXXPXLXRGXPPPAPXXXRPRPVXAXGAXG 786
P G P P P + G PPP P P G G
Sbjct: 1201 PPGAPAPPMPPGVPGGPPPPPGGRGLPAPPGGRGVVG 1237
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 28.7 bits (61), Expect = 6.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 676 PGGXPPXPXXPXLXRGXPPPAP 741
P G PP P P G PPP P
Sbjct: 620 PPGAPPPPPPPGKPGGPPPPPP 641
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 28.7 bits (61), Expect = 6.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 676 PGGXPPXPXXPXLXRGXPPPAP 741
P G PP P P G PPP P
Sbjct: 925 PPGAPPPPPPPGKPGGPPPPPP 946
>07_03_0600 + 19866757-19867218,19867920-19868429
Length = 323
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +1
Query: 610 PVXEPXXCDWIXPXXGXTXNAGPGGXPPXPXXPXLXRGXPPPAPXXXRPRP 762
P +P C P AGP PP P + PPP P P P
Sbjct: 37 PPPQPY-CQQQQPLPPHYYQAGPPHAPPPQQPPAMWGQPPPPPPQYAPPPP 86
>02_01_0296 +
1978565-1981197,1981216-1981639,1982280-1982771,
1982950-1983087
Length = 1228
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 425 GRGERSARRWLQPRLAVPRQASTSVPRTP 339
GRG RS R L+P LA+ A + +P P
Sbjct: 442 GRGPRSTLRILRPGLAISEMARSMLPAEP 470
>07_03_0809 -
21669632-21669637,21669871-21670131,21670573-21670752,
21671458-21672819
Length = 602
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +2
Query: 128 SLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMN 283
+L +D L+ YD+ PPDS+ V HA + +R+L + +N
Sbjct: 160 NLWTQVDILILRYDK--PPDSRFVQEALAAHAHATEGSETTAIRLLEVISLN 209
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 670 AGPGGXPPXPXXPXLXRGXPPPAPXXXRPRP 762
A P PP P P PPP P P P
Sbjct: 309 ASPAPPPPPPPKPAAAAPPPPPPPKAAPPPP 339
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = -2
Query: 370 VRPPQAFRGHQPSAAAPFPCVPTQSFVDPIHLKICQYPHGGLGLTNVSMSQMQGQV 203
++PP H + AP P +P+ S P++ + PH S +QM Q+
Sbjct: 551 LQPPAHMLPHAQGSRAPLPQLPSMSGPPPVNPPLPPMPHPMAMQVQGSSNQMMPQM 606
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,536,979
Number of Sequences: 37544
Number of extensions: 439559
Number of successful extensions: 2069
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1989
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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