Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_FL5_C04
(865 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0669 - 20542481-20542489,20543212-20543872,20543899-205439... 34 0.17
02_05_0003 - 24867053-24867145,24867264-24867437,24867673-248677... 32 0.51
12_02_0904 - 24181766-24181809,24181888-24182066,24182424-241824... 31 1.6
08_02_1416 - 26915306-26915459,26915553-26915668,26915798-269159... 30 2.7
08_02_1414 + 26901937-26902597,26903361-26903397,26903733-269037... 30 2.7
05_04_0369 - 20691100-20691235,20691318-20691488,20691540-206919... 30 2.7
04_03_0719 + 19006730-19007440 30 2.7
04_03_0365 - 14950398-14950880,14950967-14951262,14951277-149514... 30 2.7
03_05_0542 - 25397482-25397692,25398239-25398683,25398878-25399007 30 2.7
03_03_0246 + 15789635-15794227,15794314-15794555,15794630-157947... 30 2.7
04_04_0794 + 28104725-28104829,28105721-28105762,28106470-281065... 29 3.6
07_01_0262 + 1957973-1958220,1958272-1958935 29 4.8
05_07_0310 + 29135875-29136052,29136206-29136617,29136723-291368... 29 4.8
04_04_0584 + 26381220-26381232,26381583-26381594,26381921-263820... 29 4.8
01_01_0601 - 4476261-4476728 29 4.8
08_02_0021 + 11307795-11308093,11308454-11308556,11309623-113099... 29 6.3
08_01_0827 + 8016704-8017150 29 6.3
03_02_1001 + 13120072-13120332 29 6.3
01_05_0129 + 18431820-18432224 29 6.3
06_03_0403 - 20435349-20435358,20435750-20436204,20436744-20438315 28 8.4
05_07_0219 - 28474661-28475146,28475979-28476644 28 8.4
05_03_0474 + 14481063-14481403,14481597-14481710,14483428-144836... 28 8.4
03_02_0025 + 5084003-5084303,5084449-5084639,5084793-5084873,508... 28 8.4
01_06_0409 + 29142409-29142870 28 8.4
01_01_0957 + 7516314-7517489 28 8.4
01_01_0139 + 1263356-1264273 28 8.4
>07_03_0669 -
20542481-20542489,20543212-20543872,20543899-20543983,
20545311-20546625
Length = 689
Score = 33.9 bits (74), Expect = 0.17
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +1
Query: 472 AGSASKLSCPRSCSAKNWNGSSTSRCTRAATLRSCRGSR 588
AG + + SC RSC++ +ST RCT+A +R C+G++
Sbjct: 575 AGRSWRASCCRSCTS-----TSTLRCTQAMAIRRCQGAQ 608
>02_05_0003 -
24867053-24867145,24867264-24867437,24867673-24867735,
24868108-24868198,24869579-24869673,24870471-24870668,
24871475-24871648,24872335-24872439,24872645-24872737,
24873688-24873690,24874776-24874844,24875208-24875265,
24875810-24875918,24876603-24876714,24877992-24878204,
24878214-24878546
Length = 660
Score = 32.3 bits (70), Expect = 0.51
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -2
Query: 468 PFRGHRRRCRPDAASSAR-LPPRWTGARCRSGSSLSPSQPFRQ-LESIDLSSKTWVSNP 298
P R H R C P AAS+ + PP R RS SS S S R+ + +I L ++NP
Sbjct: 30 PLRPHVRCCSPAAASTTKPPPPPPQDRRRRSASSSSSSTSDRESIRAIRLKKVLLLANP 88
>12_02_0904 -
24181766-24181809,24181888-24182066,24182424-24182464,
24182829-24182860,24183816-24184140
Length = 206
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/48 (41%), Positives = 22/48 (45%)
Frame = +2
Query: 377 PERHRAPVHRGGRRALEAASGRHRRRCPRNGTPEARRSSHVLEAVPRR 520
P HR+P RG A AA+G RC R TP R L V RR
Sbjct: 50 PPLHRSPRRRGQGAAGVAAAGPRGGRCSRRRTP---RRGGALHGVRRR 94
>08_02_1416 -
26915306-26915459,26915553-26915668,26915798-26915910,
26915995-26916130,26916219-26916338,26916472-26916648,
26916790-26916862,26916948-26917083,26917179-26918055,
26918138-26918331,26918438-26918620,26918730-26918796,
26918900-26919092,26919317-26919363,26919478-26919574,
26919663-26919790,26919905-26920009,26920763-26920879
Length = 1010
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 7/91 (7%)
Frame = +1
Query: 478 SASKLSCPRSCSAKNWNGSSTSRCTRAATLRSCRGSRRWSAGDCTP---EASGVLAAF-- 642
S S +S PR C++ NG +S+ + + + +W +P + SG L F
Sbjct: 392 SPSPMSPPRFCASPTGNGYCSSKMAPITPVSTAMTTAKWLRSTISPLPSKPSGELLRFFS 451
Query: 643 --XRSTTXEVSKA*GMKKGXXILXSQAGRRV 729
+ T ++++ G+ G S G R+
Sbjct: 452 ACDKDVTDDITRRAGIILGAIFTSSSFGERI 482
>08_02_1414 +
26901937-26902597,26903361-26903397,26903733-26903791,
26904198-26904388,26904591-26904680,26904833-26904926,
26905008-26905159,26905250-26905347,26905400-26905459,
26905460-26905598,26905686-26905784,26905883-26906018,
26906352-26906413
Length = 625
Score = 29.9 bits (64), Expect = 2.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 201 NLCVNFVCSDHLICRYA 251
NLC +C +H +CRYA
Sbjct: 467 NLCWKLICMEHAVCRYA 483
>05_04_0369 -
20691100-20691235,20691318-20691488,20691540-20691940,
20692084-20692452,20692540-20692986,20693065-20693772
Length = 743
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 361 RTQRRSRTAPGPCPPRRKTSA*SS 432
R R TAPG CPP+R SA S+
Sbjct: 473 RVTARPTTAPGGCPPKRPASAPSA 496
>04_03_0719 + 19006730-19007440
Length = 236
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 517 KNWNGSSTSRCTRAATLRSCRGSRRWSAGDCTPEASGVLAA 639
+ W+ TSRC+ A+ R R SR S G TP ++ ++AA
Sbjct: 41 REWDAYKTSRCSGASRRRHHRRSRSGS-GTGTPSSAVIVAA 80
>04_03_0365 -
14950398-14950880,14950967-14951262,14951277-14951413,
14951562-14952039,14952203-14952215
Length = 468
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 361 RTQRRSRTAPGPCPPRRKTSA*SS 432
R R TAPG CPP+R SA S+
Sbjct: 396 RVTARPTTAPGGCPPKRPASAPSA 419
>03_05_0542 - 25397482-25397692,25398239-25398683,25398878-25399007
Length = 261
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -3
Query: 467 HSADIGVDVGRTLLQALVFLLGGQGPGAV 381
H D+GV G+ L+ A+ LLGG PG V
Sbjct: 208 HLEDVGVKHGKHLVDAVRDLLGGGDPGGV 236
>03_03_0246 +
15789635-15794227,15794314-15794555,15794630-15794771,
15796089-15796272,15796349-15796696,15796753-15797450,
15798208-15798900
Length = 2299
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +3
Query: 405 EEEDERLKQRPADIDADVRGMERRKRVEALMSSKLFREELER--VLDQQMHEGGDAPLLQ 578
EEE +RL + A A + ER + + ++ REE +R ++++ + G LQ
Sbjct: 512 EEERQRLVEEEARHAAWLAEQERLEAAKRAEEQRIAREEEKRKAAIEEERRKEGARKKLQ 571
Query: 579 RIKEMVGGRLHTGSLRGPSCVLXIND 656
++ + R ++R IND
Sbjct: 572 ELEARIARRQAESNIRDGDLASCIND 597
>04_04_0794 +
28104725-28104829,28105721-28105762,28106470-28106544,
28106811-28106950,28107036-28107093,28107239-28107241,
28107740-28107849,28108562-28108648,28108773-28108856,
28109212-28109277,28109377-28109488,28109949-28110149
Length = 360
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 404 RGGRRALEAASGRHRRRCP-RNGTPEARRSSHVLEAV 511
R GRRA AA HRRR P R+ PEA V++ V
Sbjct: 4 REGRRA-AAARAVHRRRLPARSDAPEANPRGQVIQCV 39
>07_01_0262 + 1957973-1958220,1958272-1958935
Length = 303
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +1
Query: 352 WLRRTQRRSRTAPGPCPPRRKTSA*SSVRPTSTPMSAEWNAGSASK 489
WLR+ S CP RR+ S ++ S P S AG A +
Sbjct: 85 WLRQASSSSAPVAVGCPTRRRPSPAAAAEKCSLPASPPTTAGVARR 130
>05_07_0310 +
29135875-29136052,29136206-29136617,29136723-29136867,
29137944-29138102,29138183-29138242,29138349-29138546
Length = 383
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/66 (21%), Positives = 32/66 (48%)
Frame = +3
Query: 348 GMAETDSETIPNGTGPLSTEEEDERLKQRPADIDADVRGMERRKRVEALMSSKLFREELE 527
G+A+ +E + P + E+E + +++D D E + + ++ EE E
Sbjct: 194 GLAQEVAEAVNTEEAPATAEDEKKPEDVPQSEVDKDKESPENEEEEKEPEDKEMTLEEYE 253
Query: 528 RVLDQQ 545
+VL+++
Sbjct: 254 KVLEEK 259
>04_04_0584 +
26381220-26381232,26381583-26381594,26381921-26382028,
26382137-26382217,26382320-26382465,26382550-26382624,
26382709-26382756,26382845-26382994,26383081-26383140,
26383394-26384274,26384674-26385670,26385887-26385895
Length = 859
Score = 29.1 bits (62), Expect = 4.8
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Frame = -3
Query: 587 LDPLQER--SVAALVHLLVEDPFQFFAEQLRGHESFDAL---PAFHSADI 453
LDP QE S L+H ++ P +Q G ESF +L PAF ++ I
Sbjct: 116 LDPRQEGQLSYTNLIHQIIHSPTVTIQQQTGGQESFTSLLRTPAFDNSMI 165
>01_01_0601 - 4476261-4476728
Length = 155
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +2
Query: 401 HRGGRRALEAASGRHRRRCPRNGTPEARRSS 493
HRG RRA+ GRHR R R EA R +
Sbjct: 44 HRGRRRAVTGDGGRHRER--RRAAREAARGN 72
>08_02_0021 +
11307795-11308093,11308454-11308556,11309623-11309931,
11310190-11310618
Length = 379
Score = 28.7 bits (61), Expect = 6.3
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = +1
Query: 361 RTQRRSRTAPGPCPPRRKTSA*SSVRPTSTPMSAEWNAGSASKLSC---PRSCSAKNWNG 531
R ++R P P P RR+ V TP SA A S +L C PR CS+ G
Sbjct: 149 RGRQRRLGPPPPLPARRRLGPPPPVLVPHTPASAA--AASHPRLRCRCEPRGCSSGRIEG 206
Query: 532 SSTS 543
+ +
Sbjct: 207 AGAA 210
>08_01_0827 + 8016704-8017150
Length = 148
Score = 28.7 bits (61), Expect = 6.3
Identities = 25/73 (34%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +1
Query: 388 PGPCPPRRKTSA*SSVRPTSTPMSAEWNAGSASKLSCPRSCSAKNWNGSSTSRCTRAATL 567
P P PPRR+ + T PM+ +GSA+ C RSCS + ++ S A T
Sbjct: 14 PSPPPPRRQEVGAAVRLTTRFPMTTA-PSGSATSALC-RSCS----SAAAPSPWPCAPTT 67
Query: 568 RSC-RGSRRWSAG 603
C R S W G
Sbjct: 68 PPCGRASTAWKNG 80
>03_02_1001 + 13120072-13120332
Length = 86
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 484 SKLSCPRSCSAKNWNGSSTSRCTRAATLRSCRGS 585
S+ C R+ SA+ NG + RC + + S RG+
Sbjct: 5 SRARCSRTSSARKLNGLFSRRCNSSGEVTSSRGA 38
>01_05_0129 + 18431820-18432224
Length = 134
Score = 28.7 bits (61), Expect = 6.3
Identities = 23/87 (26%), Positives = 36/87 (41%)
Frame = +1
Query: 367 QRRSRTAPGPCPPRRKTSA*SSVRPTSTPMSAEWNAGSASKLSCPRSCSAKNWNGSSTSR 546
+RR R + P P + S + T+ +A+ K++C RS +AK+ ST+
Sbjct: 4 RRRQRPSSSPPLPPEHSPLPSVIVATARARTAD------PKIACDRSAAAKSPASGSTAA 57
Query: 547 CTRAATLRSCRGSRRWSAGDCTPEASG 627
A LR C P A+G
Sbjct: 58 ALPTAKLRRCSPPHHRIRRHRVPTATG 84
>06_03_0403 - 20435349-20435358,20435750-20436204,20436744-20438315
Length = 678
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 382 TAPGPCPPRRKTSA*SSVRPTST-PMSAEWNAGSASKLSCPRSCSAKNWNGSSTS 543
++P P P +A S PTS P ++ W SA+ S +AK + +S+S
Sbjct: 622 SSPSPAPSPDSATASRSASPTSARPATSSWTCTSAATASA-SPATAKRTSSTSSS 675
>05_07_0219 - 28474661-28475146,28475979-28476644
Length = 383
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +1
Query: 325 QINRLELSEWLRRTQRRSRTAPGPCPPRRKTSA*SSVRPTSTPMSAEWNAGSASKLSCPR 504
Q+ + ++ W R TAP P PP SA + P +P ++ +A+ + P
Sbjct: 53 QLEKTRMTTWARSVVESFDTAPPPSPP--PLSATTPHPPPPSPATSSSRTATATATATPT 110
Query: 505 S 507
S
Sbjct: 111 S 111
>05_03_0474 +
14481063-14481403,14481597-14481710,14483428-14483676,
14485844-14486225
Length = 361
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 376 SRTAPGPCPPRRKTSA*SSVRPTSTPMSAEWNAGSASKLSCPRS 507
S ++P P P R+T+ +VRP S P + A S +L+ P S
Sbjct: 16 SSSSPPPPSPGRRTATAFAVRPRSLP-DPPFQAPSRDRLTLPAS 58
>03_02_0025 +
5084003-5084303,5084449-5084639,5084793-5084873,
5084972-5085319,5085409-5086293
Length = 601
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +3
Query: 384 GTGPLSTEEEDERLKQRPADIDADVRGMERRKRVEALMSSKLFREELER 530
G G E E+E +QR + + R E RKR E + REE ER
Sbjct: 475 GGGKGEKEREEEERRQREKEEEERRRQEEERKRREEEEKERREREEEER 523
>01_06_0409 + 29142409-29142870
Length = 153
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +1
Query: 499 PRSCS-AKNWNGSSTSRCTRAATLRSCRGSRRWSAGDCTPEASG 627
PRS + W + R A T + GSRRWS D SG
Sbjct: 14 PRSAPLGRIWRVEAVGRRQLATTTTTAGGSRRWSRPDLDAGGSG 57
>01_01_0957 + 7516314-7517489
Length = 391
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 365 LRDDPERHRAPVHRGGRRALEAASGRHRRRCPRNGTPEAR 484
++D+P R ++G AA+ R RRR P G PE R
Sbjct: 180 VKDNPFLMRDRENKGNDGGAAAAAARWRRRDPFEGYPERR 219
>01_01_0139 + 1263356-1264273
Length = 305
Score = 28.3 bits (60), Expect = 8.4
Identities = 26/87 (29%), Positives = 34/87 (39%), Gaps = 1/87 (1%)
Frame = +1
Query: 382 TAPGPCPPRRKTSA*SSVRPTSTPMSAEWNAGS-ASKLSCPRSCSAKNWNGSSTSRCTRA 558
TA P T A +S +STP A W S + S P +A +T T +
Sbjct: 78 TAAARSPAAGATRAKASASASSTPALAPWRPSSRRPRSSAPTRRTAAGATSPTTPSTTTS 137
Query: 559 ATLRSCRGSRRWSAGDCTPEASGVLAA 639
A R+ R R S +P LAA
Sbjct: 138 ARARTRRAHAR-SPAAASPALLEHLAA 163
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,445,546
Number of Sequences: 37544
Number of extensions: 494180
Number of successful extensions: 2253
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2250
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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