Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_FL5_C04
(865 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF166168-1|AAD49857.1| 679|Caenorhabditis elegans adducin-relat... 44 1e-04
AF166167-1|AAD49856.1| 732|Caenorhabditis elegans adducin-relat... 44 1e-04
AF039043-6|AAP82653.1| 718|Caenorhabditis elegans Adducin prote... 44 1e-04
AF039043-5|AAK70639.1| 732|Caenorhabditis elegans Adducin prote... 44 1e-04
AF039043-4|AAL32219.1| 702|Caenorhabditis elegans Adducin prote... 44 1e-04
AF039043-3|AAM54181.1| 682|Caenorhabditis elegans Adducin prote... 44 1e-04
AF039043-2|AAK70638.1| 679|Caenorhabditis elegans Adducin prote... 44 1e-04
Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical pr... 38 0.012
Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z93397-5|CAD89745.1| 375|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z27079-1|CAA81593.2| 411|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z81041-9|CAJ55253.1| 824|Caenorhabditis elegans Hypothetical pr... 28 9.9
Z81041-8|CAB02784.1| 829|Caenorhabditis elegans Hypothetical pr... 28 9.9
AC024751-4|AAK21505.1| 425|Caenorhabditis elegans Hypothetical ... 28 9.9
>AF166168-1|AAD49857.1| 679|Caenorhabditis elegans adducin-related
protein protein.
Length = 679
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Frame = +3
Query: 429 QRPADIDADVRGMERRKRVEALMSSKLFREELERVLDQQMHEGGDAP----LLQRIKEMV 596
QRPA I D+ MERRKRV+ ++ SK F ELE V+ Q+ P +LQ++ ++
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDPDHLQVLQKLSDLT 86
Query: 597 --GGRLHTGSL 623
G + G+L
Sbjct: 87 VPQGNMSFGNL 97
>AF166167-1|AAD49856.1| 732|Caenorhabditis elegans adducin-related
protein protein.
Length = 732
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Frame = +3
Query: 429 QRPADIDADVRGMERRKRVEALMSSKLFREELERVLDQQMHEGGDAP----LLQRIKEMV 596
QRPA I D+ MERRKRV+ ++ SK F ELE V+ Q+ P +LQ++ ++
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDPDHLQVLQKLSDLT 86
Query: 597 --GGRLHTGSL 623
G + G+L
Sbjct: 87 VPQGNMSFGNL 97
>AF039043-6|AAP82653.1| 718|Caenorhabditis elegans Adducin protein
1, isoform e protein.
Length = 718
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Frame = +3
Query: 429 QRPADIDADVRGMERRKRVEALMSSKLFREELERVLDQQMHEGGDAP----LLQRIKEMV 596
QRPA I D+ MERRKRV+ ++ SK F ELE V+ Q+ P +LQ++ ++
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDPDHLQVLQKLSDLT 86
Query: 597 --GGRLHTGSL 623
G + G+L
Sbjct: 87 VPQGNMSFGNL 97
>AF039043-5|AAK70639.1| 732|Caenorhabditis elegans Adducin protein
1, isoform b protein.
Length = 732
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Frame = +3
Query: 429 QRPADIDADVRGMERRKRVEALMSSKLFREELERVLDQQMHEGGDAP----LLQRIKEMV 596
QRPA I D+ MERRKRV+ ++ SK F ELE V+ Q+ P +LQ++ ++
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDPDHLQVLQKLSDLT 86
Query: 597 --GGRLHTGSL 623
G + G+L
Sbjct: 87 VPQGNMSFGNL 97
>AF039043-4|AAL32219.1| 702|Caenorhabditis elegans Adducin protein
1, isoform c protein.
Length = 702
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Frame = +3
Query: 429 QRPADIDADVRGMERRKRVEALMSSKLFREELERVLDQQMHEGGDAP----LLQRIKEMV 596
QRPA I D+ MERRKRV+ ++ SK F ELE V+ Q+ P +LQ++ ++
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDPDHLQVLQKLSDLT 86
Query: 597 --GGRLHTGSL 623
G + G+L
Sbjct: 87 VPQGNMSFGNL 97
>AF039043-3|AAM54181.1| 682|Caenorhabditis elegans Adducin protein
1, isoform d protein.
Length = 682
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Frame = +3
Query: 429 QRPADIDADVRGMERRKRVEALMSSKLFREELERVLDQQMHEGGDAP----LLQRIKEMV 596
QRPA I D+ MERRKRV+ ++ SK F ELE V+ Q+ P +LQ++ ++
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDPDHLQVLQKLSDLT 86
Query: 597 --GGRLHTGSL 623
G + G+L
Sbjct: 87 VPQGNMSFGNL 97
>AF039043-2|AAK70638.1| 679|Caenorhabditis elegans Adducin protein
1, isoform a protein.
Length = 679
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Frame = +3
Query: 429 QRPADIDADVRGMERRKRVEALMSSKLFREELERVLDQQMHEGGDAP----LLQRIKEMV 596
QRPA I D+ MERRKRV+ ++ SK F ELE V+ Q+ P +LQ++ ++
Sbjct: 27 QRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIRQECDTARTDPDHLQVLQKLSDLT 86
Query: 597 --GGRLHTGSL 623
G + G+L
Sbjct: 87 VPQGNMSFGNL 97
>Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical protein
F36H2.3 protein.
Length = 1388
Score = 37.5 bits (83), Expect = 0.012
Identities = 31/88 (35%), Positives = 38/88 (43%), Gaps = 5/88 (5%)
Frame = +1
Query: 376 SRTAPGPC--PPRRKTSA*SSVRPTSTPMSAEWNAGSASKLSCPRSCSAKNWNGSSTSRC 549
S T GPC PP A S+ A W AGS + +SCP + + G+S S C
Sbjct: 1248 SGTGTGPCYTPPLTPVGA---TLTYSSGYFAPWTAGSTATMSCP---AGQTVIGTSISYC 1301
Query: 550 TRAA---TLRSCRGSRRWSAGDCTPEAS 624
T +A L SC GS A T S
Sbjct: 1302 TNSAWSPALGSCSGSSVGQASTTTTTCS 1329
>Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical
protein T05F1.11 protein.
Length = 676
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +3
Query: 405 EEEDERLKQRPADIDADVRGM---ERRKRV-EALMSSKLFREELERVLDQQMHEGGDAPL 572
EEEDE K+R A+ VR + E+RKRV E M K EE + L+ +M E +
Sbjct: 448 EEEDE--KRRKAEESERVRKLKEEEKRKRVLEEEMEMKRKNEEAKIKLEAEMREKAEQAE 505
Query: 573 LQRIKE 590
++R +E
Sbjct: 506 IKRREE 511
>Z93397-5|CAD89745.1| 375|Caenorhabditis elegans Hypothetical
protein ZC482.8 protein.
Length = 375
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -2
Query: 228 HYTQNSHTNLNGDRNRH*ARNIIFVKTRTCCSLYNFYSTSLTD 100
H T NLN D++R+ ++ II + CCS + S L D
Sbjct: 253 HKTARKRKNLNNDKSRNTSKLIILMACSFCCSETLYGSFFLAD 295
>Z27079-1|CAA81593.2| 411|Caenorhabditis elegans Hypothetical
protein T05G5.1 protein.
Length = 411
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 405 EEEDERLKQRPADIDADVRGMERRKR-VEALMSSKLFREELERVLDQQMHEGGD 563
EEE RL + +A VR ERR++ E + +L + + + +Q +EGGD
Sbjct: 190 EEESRRLAAQRETDEARVRDEERRRQETEKEVEKELNDKRTQSMNEQFEYEGGD 243
>Z81041-9|CAJ55253.1| 824|Caenorhabditis elegans Hypothetical
protein C27A7.1b protein.
Length = 824
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 489 ALMSSKLFREELERVLDQQMHEGGDAPLLQRIKEMVG 599
A+ SSK+ EEL R L Q + + G P L+R+ M G
Sbjct: 82 AMSSSKVQLEELTRKLSQPLEQLG--PTLERLSNMPG 116
>Z81041-8|CAB02784.1| 829|Caenorhabditis elegans Hypothetical
protein C27A7.1a protein.
Length = 829
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 489 ALMSSKLFREELERVLDQQMHEGGDAPLLQRIKEMVG 599
A+ SSK+ EEL R L Q + + G P L+R+ M G
Sbjct: 87 AMSSSKVQLEELTRKLSQPLEQLG--PTLERLSNMPG 121
>AC024751-4|AAK21505.1| 425|Caenorhabditis elegans Hypothetical
protein Y18H1A.1 protein.
Length = 425
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = -2
Query: 432 AASSARLPPR--WTGARCRSGSSLSPSQPFRQLESIDLSSKTWVSNPVARVLQESCTVQQ 259
+ +A PP+ +G + + +LS S P S+ + WV VA+ +S +
Sbjct: 68 STENAFQPPKDLISGRKPKGAPNLSGSVPLSHKSSLTGGADKWVGEAVAKNWMDSIDTAE 127
Query: 258 MARRSDKL 235
+ + DKL
Sbjct: 128 VKKEYDKL 135
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,109,901
Number of Sequences: 27780
Number of extensions: 381650
Number of successful extensions: 1490
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1488
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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