Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_FL5_C02
(942 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 48 2e-07
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 47 3e-07
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 43 4e-06
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 43 5e-06
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 43 5e-06
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 42 1e-05
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 42 1e-05
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 42 1e-05
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 42 1e-05
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 42 1e-05
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 42 1e-05
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 42 1e-05
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 42 1e-05
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 40 2e-05
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 39 8e-05
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 39 8e-05
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 38 1e-04
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 38 2e-04
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 37 2e-04
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 36 4e-04
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 36 5e-04
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 32 0.007
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 25 0.99
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 23 4.0
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 9.3
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 9.3
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 9.3
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 9.3
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 47.6 bits (108), Expect = 2e-07
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Frame = +2
Query: 80 CENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA-NIRESESXVRIQADLQ 244
C + D LL+ Y+R P S +VV L L L ++ + + L+
Sbjct: 15 CHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILTTNVWLE 74
Query: 245 MNWIDKRLSWNAGEWGXXTWL-VSSERLWTPDVVLXN 352
W D + W+ E+G T L V SE +W PD+VL N
Sbjct: 75 HEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYN 111
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 46.8 bits (106), Expect = 3e-07
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Frame = +2
Query: 80 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESXVRIQADLQ 244
C++ TS S + L YDRD P+ K ++ L ++H N+ E V L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 245 MNWIDKRLSWNAGEWGXXTWL-VSSERLWTPDVVL 346
+ W L+W + E+ + V S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 43.2 bits (97), Expect = 4e-06
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Frame = +2
Query: 86 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESXVRIQADLQMNW 253
N +++S ++D+LL YD PD V + + +R I E + + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 254 IDKRLSWNAGEWGXXTWLVSSERLWTPDVVLXNAXCSXARGLXSP 388
+D+RL++ G+ + R+W PD N S + SP
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSP 106
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 42.7 bits (96), Expect = 5e-06
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Frame = +2
Query: 107 MIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESXVRIQADLQMNWIDKRLS 271
+ D LL+ Y+R P ++ V + L L ++ + ++ W D +L
Sbjct: 24 LYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVWVEQEWNDYKLK 83
Query: 272 WNAGEWGXXTWL-VSSERLWTPDVVLXN 352
WN ++G L V SE +W PD+VL N
Sbjct: 84 WNPDDYGGVDTLHVPSEHIWLPDIVLYN 111
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 42.7 bits (96), Expect = 5e-06
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Frame = +2
Query: 107 MIDSLLATYDRDSPPDSKIVVNLT--LHLRHANIRESESXVRIQAD---LQMNWIDKRLS 271
+ D LL+ Y+R P LT L L+ + + E ++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 272 WNAGEWGXXTWL-VSSERLWTPDVVLXN 352
WN E+G L V SE +W PD+VL N
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYN 124
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 41.5 bits (93), Expect = 1e-05
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 197 NIRESESXVRIQADLQMNWIDKRLSWNAGEWGXXTWL-VSSERLWTPDVVLXNA 355
++ E + A L++ W+D L WN E+G L ++ +LW PD+++ N+
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNS 78
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 41.5 bits (93), Expect = 1e-05
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 197 NIRESESXVRIQADLQMNWIDKRLSWNAGEWGXXTWL-VSSERLWTPDVVLXNA 355
++ E + A L++ W+D L WN E+G L ++ +LW PD+++ N+
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNS 78
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 41.5 bits (93), Expect = 1e-05
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 197 NIRESESXVRIQADLQMNWIDKRLSWNAGEWGXXTWL-VSSERLWTPDVVLXNA 355
++ E + A L++ W+D L WN E+G L ++ +LW PD+++ N+
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNS 78
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 41.5 bits (93), Expect = 1e-05
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 197 NIRESESXVRIQADLQMNWIDKRLSWNAGEWGXXTWL-VSSERLWTPDVVLXNA 355
++ E + A L++ W+D L WN E+G L ++ +LW PD+++ N+
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNS 78
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 41.5 bits (93), Expect = 1e-05
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 197 NIRESESXVRIQADLQMNWIDKRLSWNAGEWGXXTWL-VSSERLWTPDVVLXNA 355
++ E + A L++ W+D L WN E+G L ++ +LW PD+++ N+
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNS 78
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 41.5 bits (93), Expect = 1e-05
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 197 NIRESESXVRIQADLQMNWIDKRLSWNAGEWGXXTWL-VSSERLWTPDVVLXNA 355
++ E + A L++ W+D L WN E+G L ++ +LW PD+++ N+
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNS 78
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 41.5 bits (93), Expect = 1e-05
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 197 NIRESESXVRIQADLQMNWIDKRLSWNAGEWGXXTWL-VSSERLWTPDVVLXNA 355
++ E + A L++ W+D L WN E+G L ++ +LW PD+++ N+
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNS 146
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 41.5 bits (93), Expect = 1e-05
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 197 NIRESESXVRIQADLQMNWIDKRLSWNAGEWGXXTWL-VSSERLWTPDVVLXNA 355
++ E + A L++ W+D L WN E+G L ++ +LW PD+++ N+
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNS 146
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 40.3 bits (90), Expect = 2e-05
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Frame = +2
Query: 80 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRESESXVRIQADLQ 244
C + D LL+ Y++ P + LT+ ++ ++ + ++
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLWVE 78
Query: 245 MNWIDKRLSWNAGEWGXXTWL-VSSERLWTPDVVLXN 352
+W D +L W+ E+G L V S+ +W PD+VL N
Sbjct: 79 QSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYN 115
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 38.7 bits (86), Expect = 8e-05
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Frame = +2
Query: 107 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESXVRIQAD---LQMNWIDKRLS 271
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 272 WNAGEWGXXTWL-VSSERLWTPDVVLXN 352
W E+G L V S+ +W PD+VL N
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYN 119
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 38.7 bits (86), Expect = 8e-05
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Frame = +2
Query: 107 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESXVRIQAD---LQMNWIDKRLS 271
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 272 WNAGEWGXXTWL-VSSERLWTPDVVLXN 352
W E+G L V S+ +W PD+VL N
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYN 119
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 37.9 bits (84), Expect = 1e-04
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +2
Query: 158 KIVVNLTL-HLRHANIRESESXVRIQADLQMNWIDKRLSWNAGEWGXXTWL-VSSERLWT 331
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G L + +++W
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 332 PDVVLXN 352
PD+VL N
Sbjct: 111 PDIVLFN 117
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 37.5 bits (83), Expect = 2e-04
Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Frame = +2
Query: 83 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESXVRIQADLQMN 250
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 251 WIDKRLSWNAGEWGXXTWL-VSSERLWTPDVVLXNA 355
W D LSW ++ ++ V S+ +W PD+ + N+
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNS 134
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 37.1 bits (82), Expect = 2e-04
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +2
Query: 161 IVVNLTLHLRHANIRESESXVRIQADLQMNWIDKRLSWNAGEW-GXXTWLVSSERLWTPD 337
+V L+LH ++ E + + W D L WNA E+ G V R+W PD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 338 VVLXN 352
+L N
Sbjct: 92 TILYN 96
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 36.3 bits (80), Expect = 4e-04
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Frame = +2
Query: 107 MIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESXVRIQADLQMNWIDKRLS 271
+++ LL TY+ P +V++ L L ++ E + L++ W D +
Sbjct: 27 LLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLLITNLWLKLEWNDVNMR 86
Query: 272 WNAGEWGXXTWL-VSSERLWTPDVVLXNA 355
WN ++G L + RLW PDV++ N+
Sbjct: 87 WNVSDYGGVRDLRIPPHRLWKPDVLMYNS 115
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 35.9 bits (79), Expect = 5e-04
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 9/91 (9%)
Frame = +2
Query: 107 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESXVRIQADLQMNWIDKR 265
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 266 LSWN--AGEWGXXTWLVSSERLWTPDVVLXN 352
L +N G T L + R+W PD+ N
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSN 124
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 32.3 bits (70), Expect = 0.007
Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 5/110 (4%)
Frame = +2
Query: 95 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESXVRIQADLQMNWID 259
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 260 KRLSWNAGEWGXXTWLVSSERLWTPDVVLXNAXCSXARGLXSPXPAYXIS 409
RLS+ + ER+W PD N S + P IS
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRIS 145
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 25.0 bits (52), Expect = 0.99
Identities = 18/74 (24%), Positives = 27/74 (36%)
Frame = +2
Query: 200 IRESESXVRIQADLQMNWIDKRLSWNAGEWGXXTWLVSSERLWTPDVVLXNAXCSXARGL 379
I E I L W D+RL+++ E +E++W PD N S +
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 380 XSPXPAYXISGSXS 421
+SG S
Sbjct: 135 TERNKLVRLSGDGS 148
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 23.0 bits (47), Expect = 4.0
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -2
Query: 311 TPAKXXSPTPLRSNSVVCRSNSFED 237
TP + + PL + V CR+N E+
Sbjct: 26 TPRRKKNKKPLPTECVFCRNNGEEE 50
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.8 bits (44), Expect = 9.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 56 QVRRNGNKNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.8 bits (44), Expect = 9.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 56 QVRRNGNKNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.8 bits (44), Expect = 9.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 56 QVRRNGNKNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 218 RIYRNGTVNYLMRRHLI 234
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.8 bits (44), Expect = 9.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 56 QVRRNGNKNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,048
Number of Sequences: 438
Number of extensions: 2108
Number of successful extensions: 47
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30839445
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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