Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP07_FL5_B22
(882 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_02_0085 - 6465126-6466049 33 0.30
03_05_0466 - 24602715-24603964,24605762-24605944,24606381-246072... 33 0.30
06_03_1501 + 30612643-30613310,30613396-30613501,30613732-306139... 33 0.40
04_04_0675 + 27183826-27184443 32 0.70
04_03_0830 - 20125827-20125913,20126262-20126357,20126974-201270... 31 1.6
07_01_0020 - 127855-129156,129240-129365,129811-129865,130047-13... 30 2.8
04_04_1400 - 33259716-33260069,33260172-33260219,33260471-332605... 30 2.8
03_01_0214 + 1694297-1694360,1694396-1694440,1694441-1694622 29 3.7
12_01_0832 - 7718765-7719088 29 4.9
08_02_1355 + 26343939-26345054 29 6.5
08_02_1148 - 24693323-24693877,24694092-24694315,24694519-246946... 29 6.5
08_01_0213 - 1703682-1703696,1703824-1703919,1704033-1704104,170... 29 6.5
09_04_0303 - 16505782-16506902,16507232-16507292 28 8.6
08_02_1418 - 26931896-26932339,26932435-26932668,26932805-269331... 28 8.6
07_03_1165 - 24459156-24460139 28 8.6
05_04_0356 - 20584212-20584628,20584798-20584899,20585658-205857... 28 8.6
02_04_0130 + 20025414-20025531,20026357-20026585,20026909-200270... 28 8.6
>05_02_0085 - 6465126-6466049
Length = 307
Score = 33.1 bits (72), Expect = 0.30
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -1
Query: 345 LELPPRQDAAPPWSGDRIATRNPQRAPPLPGPREASLATYLDLTVRLLHS 196
L PPR + P +++A +PQ PLP +LDL L+HS
Sbjct: 94 LRSPPRSPSPPTPKPNQVAAVSPQLPLPLPPVSPGRRTLFLDLDETLIHS 143
>03_05_0466 -
24602715-24603964,24605762-24605944,24606381-24607286,
24609446-24609516,24609737-24609846,24610073-24610108,
24610211-24610278,24610655-24610760,24610850-24610997,
24611091-24611218,24611319-24611454,24611924-24612072
Length = 1096
Score = 33.1 bits (72), Expect = 0.30
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -1
Query: 687 EATSPVLFLQRG-RGXAPRKRXSTRACAPPCPRCSH 583
E++S V+FL G G P R PPCP CSH
Sbjct: 2 ESSSSVIFLGTGCSGALPDARCLIHPSTPPCPVCSH 37
>06_03_1501 +
30612643-30613310,30613396-30613501,30613732-30613934,
30614211-30614502
Length = 422
Score = 32.7 bits (71), Expect = 0.40
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +3
Query: 420 RTVEAIRPVLSDWVNRDRGRLTFRATQVLTGHGCFGRYLHLVARREPTPKCHHCSGCNED 599
+ VE + L+DWV+ + G+ T TG C+G L + R++P+ GC D
Sbjct: 190 KNVEMLSEHLADWVSEEDGKKIVFHTFSNTGWLCYGVILENLQRQDPS-AMDKIKGCVVD 248
Query: 600 TA 605
+A
Sbjct: 249 SA 250
>04_04_0675 + 27183826-27184443
Length = 205
Score = 31.9 bits (69), Expect = 0.70
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = -2
Query: 446 DRADRLDGPSPVGGVRQAARPRPEHGTPRLKLPRSNFHRARTRLPPG 306
D D LDGPSP Q+ P P P L S+ + RLP G
Sbjct: 89 DAIDLLDGPSPSASPSQSPSPPPPASPPPLPPAPSSPPPKKRRLPDG 135
>04_03_0830 -
20125827-20125913,20126262-20126357,20126974-20127053,
20127124-20127220,20127457-20127544,20128491-20128576,
20129358-20130530
Length = 568
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = -2
Query: 530 AAETAVSREHLRRSEGETSSVAIHPVREDRADRLDGPSPVGGVR--QAARPRPEHGTP 363
+A ++ H+ +E +SS+ +HP A ++ S GG++ ++ PRPE TP
Sbjct: 78 SASSSTPTSHVA-AESSSSSLPLHPSAAAAARKVIPASAAGGLKRSKSVAPRPEETTP 134
>07_01_0020 -
127855-129156,129240-129365,129811-129865,130047-130177
Length = 537
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -2
Query: 506 EHLRRSEGETSSVAIHPVREDRADRLDGPSPVGGVRQAARPR-PEHGTPRLKLPRSNFHR 330
+H RR+ +TSS P + ++L+ G + PR P H T SN H
Sbjct: 359 DHFRRNNTDTSSSVASPATDLFLEKLEDDDDGGWPWERETPRPPPHHTSNAACSNSNDHG 418
Query: 329 ART 321
R+
Sbjct: 419 GRS 421
>04_04_1400 -
33259716-33260069,33260172-33260219,33260471-33260596,
33260850-33260900,33260963-33261055,33261217-33261272,
33261465-33261522,33262306-33262365,33262513-33262623,
33263368-33263949,33264026-33264097
Length = 536
Score = 29.9 bits (64), Expect = 2.8
Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Frame = -1
Query: 375 ARHAEIEASA----LELPPRQD---AAPPWSGDRIATRNPQRAPPLPGPREASLA 232
A HA +SA L+ P R+ A PP G R+A R P PP P P AS A
Sbjct: 44 ALHASSSSSAADALLDAPTRRQPPVAPPPSLGLRLAARRPNLPPP-PAPAPASPA 97
>03_01_0214 + 1694297-1694360,1694396-1694440,1694441-1694622
Length = 96
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = -3
Query: 733 ACQDSSLPS-IVATTVGSDKSGPIFATRTRRCSAKAGQYASVCSAVSSLQPL-QWWHFGV 560
A +SS+P IV ++ + GP+ R C +++ ++ C+ ++ + F
Sbjct: 20 ATGESSVPFLIVVGSIAGEMGGPVMVAEARTCESQSHRFKGPCARKANCASVCNTEGFPD 79
Query: 559 GSLRATRCR*RPKQPCP 509
G R R +PCP
Sbjct: 80 GYCHGVRRRCMCTKPCP 96
>12_01_0832 - 7718765-7719088
Length = 107
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -3
Query: 628 GQYASVCSAVSSLQPLQWWHFGVGSLRATRCR*RPKQPCPVST 500
G+ S+ +L + +WH+G G A R +P PC + T
Sbjct: 27 GKACGETSSPVALDAVPYWHYGEGQGLAKPLRPQPLTPCLIGT 69
>08_02_1355 + 26343939-26345054
Length = 371
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 545 DEVQVAAETAVSREHLRRSEGETSSVAIHPVRED 444
D+ Q + AV EHL GE +A+HP ED
Sbjct: 278 DDDQWRPKHAVKVEHLAHGGGEVRFLAMHPEEED 311
>08_02_1148 -
24693323-24693877,24694092-24694315,24694519-24694636,
24694761-24695132,24696998-24697324
Length = 531
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 247 PGTWKRRRSLRITRGDAISAPGG 315
P W+RRR + RG A+S GG
Sbjct: 24 PQRWRRRRQRGVERGGAVSGGGG 46
>08_01_0213 -
1703682-1703696,1703824-1703919,1704033-1704104,
1704372-1704444,1704508-1704710,1705058-1706330,
1706800-1706868,1706940-1707088,1707275-1707487,
1708385-1708669
Length = 815
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
Frame = +1
Query: 307 PGGSRVLARWKFERGSFNLGVPCS-----GRGLAAWRTPPTGDG 423
P G R L W RG+ PC+ G G AA TPP G
Sbjct: 2 PSGGRRLPPWTSPRGAAPRWSPCTPAGADGSGRAAHATPPASGG 45
>09_04_0303 - 16505782-16506902,16507232-16507292
Length = 393
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 362 RLKLPRSNFHRARTRLPPGAEIASPRVIRSE 270
RL++ S H A + LPP A A+ ++RSE
Sbjct: 95 RLQVAPSPAHAAASSLPPSAAAAATAILRSE 125
>08_02_1418 -
26931896-26932339,26932435-26932668,26932805-26933110,
26933462-26933644,26934386-26934493
Length = 424
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = +3
Query: 447 LSDWVNRDRGRLTFRATQVLTGHGCFGR--YLHLVARREPTPKCHHCSGCN 593
LS+W G T+ + +G + Y H P P+C HCS CN
Sbjct: 131 LSEWPGGQHGSTGLPLTKDVLVNGVLVKVKYCHTCMLYRP-PRCSHCSICN 180
>07_03_1165 - 24459156-24460139
Length = 327
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -1
Query: 378 RARHAEIEASALELPPRQDAAPPWSGDRIATRNPQRA 268
R HAE E + LPP Q AAP R+ TR R+
Sbjct: 133 RVHHAENEKEPMSLPP-QVAAPVHPQARLPTRGASRS 168
>05_04_0356 -
20584212-20584628,20584798-20584899,20585658-20585705,
20586046-20586186,20586315-20586437,20587166-20587252,
20587630-20587742,20587844-20587943,20588217-20588601,
20588841-20588917,20589501-20589593,20589697-20589774,
20590923-20591246
Length = 695
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -1
Query: 321 AAPPWSGDRIATRNPQRAPPLPGPREAS 238
AAP GD +A RAPP P P A+
Sbjct: 18 AAPKPPGDAVAAEGEARAPPRPPPAVAA 45
>02_04_0130 +
20025414-20025531,20026357-20026585,20026909-20027032,
20027441-20027497,20027613-20027804,20027882-20027959,
20028437-20028619,20028715-20028795,20029196-20029228,
20029448-20029513,20029591-20029683,20030106-20030231,
20030395-20030508,20030973-20031068,20031159-20031256,
20031416-20031831,20032025-20032473,20032810-20032905
Length = 882
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Frame = -2
Query: 554 PPGDEVQVAAETAVSREHLRRSEGETSSV--AIHPVREDRADRLDGPS----PVGGV 402
PP + + E+ R +R++EG T S+ ++ E + LDGP P+GG+
Sbjct: 33 PPPPSAKGSQESRTPRRRVRKTEGATKSLEDSVKRKMEQFYEGLDGPPLRVLPIGGL 89
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,963,096
Number of Sequences: 37544
Number of extensions: 492933
Number of successful extensions: 2106
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2102
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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